Os08g0164000

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Revision as of 12:48, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0164000| Description = Protein of unknown function DUF569 family protein| Version = NM_001067604.1 GI:115474944 GeneID:4344742| Length = 35...")
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Gene Name

Os08g0164000

Description

Protein of unknown function DUF569 family protein

Version

NM_001067604.1 GI:115474944 GeneID:4344742

Length

3513 bp

Definition

Oryza sativa Japonica Group Os08g0164000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:3756319..3759831

Sequence Coding Region

3756673..3756755,3757708..3757993,3758167..3758484,3758648..3759166,3759253..3759687

Expression

GEO Profiles:Os08g0164000

Genome Context

<gbrowseImage1> name=NC_008401:3756319..3759831 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:3756319..3759831 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgaattcgtgggagtggtacagatcgacggcggcggcggggacgggggctggggccctgttggagcagcggcgggcgtcggcgaggtcggcgacggtgcccttcctcccgatgcggtcgcgggagccggcggagccgatggagtggacgagctgcgccaagcagaggcgagactccgaaaactatgcttggagtacaccggcacgggcagcatgccatgcgccggctgctatctccgactcgataaaggaattcctcataagaagtttaagcttctcctccttaaggggaatggagccaagcgtcatttcgagacagtgcataaactcgacaagaataagaaaaatcgctgcaaaaactgcggaagctacttccgcagtaaagaagaattgcgagaccataaagaccgaatccatcaataagctcaccgaggaggcgctgaggatctggaagagcggctcgtacctccacgccgacgaggacgggaggtccgtctacatcggcagcctcccccgcgccggcggcgactcgaggcacggaacgatgtgggccgtcgagccgccgatcgacgccgcggcgccgctgccgcagtacgcgcgcctccgcgccgcctacggccgctacctcgggacccccgactcctacggctccccgctccccttcctcccggtggacgccgcgcagcgcgaccgcgacagggtggagatggacgccatcatgtggcagcccgtcgcgtgctccggctccgacgtggtcggcggtcgcgatgcccgcggcgtcgtcctcctgcgcgacaggtacgggcgctacctccgcggcagcaacaatctcctggctccccgccgcagcgtccctgtcaagccctacgtcgtgaacgagcatatgtttcggtgggaggtggtgcgtgtccccctgagtgaagccaggccggagctcccgatcgccgctcagtccggcttcgtcgcggcgtgcttcccaccgctgctgcgagtgatcgagttcgtgggcgaagacgacctcgacaacatcggcgagggagaaatctggactacggttgagaccagagggaggtcggtgaggctcctgaaagagaagatcgcgaagcttgtgggctacgaagacttcacgatgtgcgtcagcgccggccgccatgggcagttcacccctctgctcatggatgccaacttcgagggcgaagatacgttgctgtgggaggtggtgcgcgtccccccgagtggagacatgccggggctcccgatcgccactcagcccgggttcttcgtcagggcgtgcttcccccagccgctgcgggagatccagttcgtggacgaagccgacctcgacaacaccagcgagggagaaatctggactacggttgagatcagagggaggtcggtgaggctcctgagagagaagatcgcggagcttgtgggctacgacgacttcacgatgtgcgtcagcgccggccgccatgggcagttcacccctctgctcatcgacctgcctcgcagccgggagaccctgaacatcgtcctcctcaggaccaacagcgaagcgaatgatcagatgatattcccgaatccgaatgcattgccgtcagcagaggccacagatgaagacaatgccacgattgagtga</cdnaseq>

Protein Sequence

<aaseq>MMNSWEWYRSTAAAGTGAGALLEQRRASARSATVPFLPMRSREP AEPMEWTSCAKQRRDSENYAWSTPARAACHAPAAISDSIKEFLIRSLSFSSLRGMEPS VISRQCINSTRIRKIAAKTAEATSAVKKNCETIKTESINKLTEEALRIWKSGSYLHAD EDGRSVYIGSLPRAGGDSRHGTMWAVEPPIDAAAPLPQYARLRAAYGRYLGTPDSYGS PLPFLPVDAAQRDRDRVEMDAIMWQPVACSGSDVVGGRDARGVVLLRDRYGRYLRGSN NLLAPRRSVPVKPYVVNEHMFRWEVVRVPLSEARPELPIAAQSGFVAACFPPLLRVIE FVGEDDLDNIGEGEIWTTVETRGRSVRLLKEKIAKLVGYEDFTMCVSAGRHGQFTPLL MDANFEGEDTLLWEVVRVPPSGDMPGLPIATQPGFFVRACFPQPLREIQFVDEADLDN TSEGEIWTTVEIRGRSVRLLREKIAELVGYDDFTMCVSAGRHGQFTPLLIDLPRSRET LNIVLLRTNSEANDQMIFPNPNALPSAEATDEDNATIE</aaseq>

Gene Sequence

<dnaseqindica>3077..3159#1839..2124#1348..1665#666..1184#145..579#aaacgcaaccgtcgctaagaaactcttccacggctacttgcctctctcgtcttcctccccacgccactcgccaccgcgcgcgcgccactctctcgcgactcctcgccaccgccttcggaccacgagattccggcgactttatggatgatgaattcgtgggagtggtacagatcgacggcggcggcggggacgggggctggggccctgttggagcagcggcgggcgtcggcgaggtcggcgacggtgcccttcctcccgatgcggtcgcgggagccggcggagccgatggagtggacgagctgcgccaagcagaggcgagactccgaaaactatgcttggagtacaccggcacgggcagcatgccatgcgccggctgctatctccgactcgataaaggaattcctcataagaagtttaagcttctcctccttaaggggaatggagccaagcgtcatttcgagacagtgcataaactcgacaagaataagaaaaatcgctgcaaaaactgcggaagctacttccgcagtaaagaagaattgcgagaccataaagaccgaatccatcaataagctcaccgaggtgagctcctccgatccgctcctcttctcttcttgtgttcttgccacggtttggttctaattgtgacgacgatggaggttttccaggaggcgctgaggatctggaagagcggctcgtacctccacgccgacgaggacgggaggtccgtctacatcggcagcctcccccgcgccggcggcgactcgaggcacggaacgatgtgggccgtcgagccgccgatcgacgccgcggcgccgctgccgcagtacgcgcgcctccgcgccgcctacggccgctacctcgggacccccgactcctacggctccccgctccccttcctcccggtggacgccgcgcagcgcgaccgcgacagggtggagatggacgccatcatgtggcagcccgtcgcgtgctccggctccgacgtggtcggcggtcgcgatgcccgcggcgtcgtcctcctgcgcgacaggtacgggcgctacctccgcggcagcaacaatctcctggctccccgccgcagcgtccctgtcaagccctacgtcgtgaacgagcatatgtttcggtgggaggtggtgcgtgtccccctgagtgaagccaggccggagctcccgatcgccgctcaggtgagctcctcctcttctttctcttcttgtgtgtttgttgcgtctcttggagttgatttgggtgggagttgatttggttgttggcttgttgcaagaactaaccgtgtggtacaatctgtgaattgatcgaattccttctgctgccattgttgattttgtgcagtccggcttcgtcgcggcgtgcttcccaccgctgctgcgagtgatcgagttcgtgggcgaagacgacctcgacaacatcggcgagggagaaatctggactacggttgagaccagagggaggtcggtgaggctcctgaaagagaagatcgcgaagcttgtgggctacgaagacttcacgatgtgcgtcagcgccggccgccatgggcagttcacccctctgctcatggatgccaacttcgagggcgaagatacgttgctgtgggaggtggtgcgcgtccccccgagtggagacatgccggggctcccgatcgccactcaggtgagcttctccgatccttctccgctctcttcttgcgattcctgtttttttgttttgtgtcttgatgctgatttcgtcggaaattaatcttgatttcttgcaagaattaaccgtgcagtacaatttgtggattgatcgaatttccttctgctaccgttgttgattttgtgcagcccgggttcttcgtcagggcgtgcttcccccagccgctgcgggagatccagttcgtggacgaagccgacctcgacaacaccagcgagggagaaatctggactacggttgagatcagagggaggtcggtgaggctcctgagagagaagatcgcggagcttgtgggctacgacgacttcacgatgtgcgtcagcgccggccgccatgggcagttcacccctctgctcatcgacctgcctcgcagccgggagaccctgaacatcgtcctcctcaggaccaacagcgaaggtaaaaatcccagttcgagtatgaatgttgctgaattttctgaacaatgtttatgtgattctgaattttgctttgtctctgtttctctgattttgttacgtcagtccagcactgtagattttcctgttttcagtagtttgtgcctgttgtggaatttgctgaaaatgtagtcatgatgtgtttgcttgtagagttaggatttgtctgaagaatatactgtagaacagcagaagtgaaattcatctgccgaattttaatctcggccaccaccagacaattctatgcactttgggcttatctgaatgttgtagggtttatctgagctttgtagactttttcacacaatggtctgaatactgtagctgaatgcttgattggtatgtaaatatggtgtgcatctgggttattactattgttgtgactcagaactaaagtggatggattgaaacaagttcaagcctgcattgtctattcaacttgtttcacaatgatcatatcggtagtttagtgtgaaattcgacatccaatatgcatgttgctggattttctgaacattacttatgtaattcttaattttgctctgaaaggaatgcatggcatgacgtgggcagtgcttctgtttttctgggcctttttagctagttcagctcatctttttttgtctgttaggacttgtctgaagaatactttagaacgacagaactatacaagtgaaatatatctgcacttatctgatgaatattcatttcaggcatcatcagacaattgtgtgcaccttgggtttaactgaatgctgtaggattcatctgaatgttgtagatttttcagtgtgaaattcagcatccgagtagcattttaacatgtgaattactggcactgtttttacttgcaagagctgtaattcttgtgtattactctttctaactgcgtgatttgtttgctatggctgcagcgaatgatcagatgatattcccgaatccgaatgcattgccgtcagcagaggccacagatgaagacaatgccacgattgagtgaatccttttgtgctgaagttctgacaggctcagggaactcgacagaagattagtgtgttggtatagggtggaattttcagttcagccgatgctgcaatgcagttttatgtttgctatcagctgtagaatggctgaaaactctgaaattttcagtgtgttcaatgggtgtttttcgacggtttcacatacttcggaaaccggtaaaacagggccttctaaggaaaatattggttttggtgacaattagtattcatgcctagtatggattgacgccaaaaatgtgcttattcctgaagtatattagtgttcatgctaaacttggtagaaatatgcatgatgtctctgaattctgatg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0164000, RefSeq:Os08g0164000