Os08g0165800

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Revision as of 12:48, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0165800| Description = TatD-related deoxyribonuclease family protein| Version = NM_001188470.1 GI:297726070 GeneID:9270278| Length = 3158 b...")
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Gene Name

Os08g0165800

Description

TatD-related deoxyribonuclease family protein

Version

NM_001188470.1 GI:297726070 GeneID:9270278

Length

3158 bp

Definition

Oryza sativa Japonica Group Os08g0165800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:3838192..3841349

Sequence Coding Region

3838192..3838373,3838507..3838594,3838717..3838833,3839031..3839111,3840552..3840586
,3841012..3841095,3841274..3841349

Expression

GEO Profiles:Os08g0165800

Genome Context

<gbrowseImage1> name=NC_008401:3838192..3841349 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:3838192..3841349 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtccaccggcgtcaagctcatcggcgagtgctctactctctctctctctctctctctctcgctcgcggctctcatgctcctacctggactgacccggccttcttctactcctcctctcatcttcttctccatctccggcgccaccgcgacgagcagacatcgccgtcaacttcaccggggcatctaccacggcaagcagtgccacgccgccgacatccccgccgtgatcgcccgcgcgtgggcggccggcgtcgaccgcatcatcgtcaccggaggctcgctgaaggaatctagagaagtgctcgagatcgccgagactgacggtgagctcagctgcttggatgcgggttgttttgactatgttatgcttggtgccttcaaggagtttgaggagagtggagatccggaagggcatttccaggcgctgctggctctggcgaaggaaggaatcgcgaaaggcaagttatgtcaggtaaactctaataaggttattgttcagcaagttcttgaggttgtagctggatgcaaaggaatttctgacattgaaggcttaagtaaaactctgtaccacaacacgtgcaggttcttcttccctcaggacctggatgcttctgctgatgcacagcttgagagtggtgcggctattcaaaatagctga</cdnaseq>

Protein Sequence

<aaseq>MASTGVKLIGECSTLSLSLSLSLAALMLLPGLTRPSSTPPLIFF SISGATATSRHRRQLHRGIYHGKQCHAADIPAVIARAWAAGVDRIIVTGGSLKESREV LEIAETDGELSCLDAGCFDYVMLGAFKEFEESGDPEGHFQALLALAKEGIAKGKLCQV NSNKVIVQQVLEVVAGCKGISDIEGLSKTLYHNTCRFFFPQDLDASADAQLESGAAIQ NS</aaseq>

Gene Sequence

<dnaseqindica>1..182#316..403#526..642#840..920#2361..2395#2821..2904#3083..3158#atggcgtccaccggcgtcaagctcatcggcgagtgctctactctctctctctctctctctctctcgctcgcggctctcatgctcctacctggactgacccggccttcttctactcctcctctcatcttcttctccatctccggcgccaccgcgacgagcagacatcgccgtcaacttcaccggtacccacctcctcctcctcctcccgactcttatctcgtttttcgcgtttcactgcctggctctcacgctttctactcgcgtcttggcgtcttgctcttgctgctgcgaacgaactgaagatggcatgttcaggggcatctaccacggcaagcagtgccacgccgccgacatccccgccgtgatcgcccgcgcgtgggcggccggcgtcgaccgcatcatcgtacgctgctttgctgccggccattccccctttcgcttctttcttgctttgtttctactttcttttggctcagctttggtgtgcttaatctcttgctttctttggtttggtccgggcggaaggtcaccggaggctcgctgaaggaatctagagaagtgctcgagatcgccgagactgacggtgagctcagctgcttggatgcgggttgttttgactatgttatgcttggtgccttcaaggtgtttgttgtaatgtgcccgagaagctgtgatgtgcttggacgatgcagggaggctgttctgcacggtgggcgtgcacccgacgagatgtggggtaggggtggattgtgtatcattcctgtttcattgctggcatctgagattggcacatgcctttcgcgattggtttatgtaattagtgctttgttgaatgctaggagtttgaggagagtggagatccggaagggcatttccaggcgctgctggctctggcgaaggaaggaatcgcgaaaggcaaggtgtgtgtatcacttgtcctgtaggtctattgtgtagtgaaatgtttcttttaatttcacccggggatcccctcctgagtcctgaatatataatatatttggcatgtcatttttgaatgaccatgcaaatagttagaggacatatagggcggcagaaagtacctgtttccatatagaaattacatgtcaaccattgggctttagtctcactgcccaaaggttgatatgttaaatgcattgtcgtagcagtcttgttcttgagggaggtaagctattgaagatcacccattgcggtgtttctagattctccagaagaatagtaagaagaaagtgctgaaatgctgccgtggtagtgcttgatctgcttgtagacttcccaagttgtgtcctatagtgaaatgttattgcaatcttgccatatattttgcttgaaaataattgggctcactgaattttgtttgatctgcttgtagacttcccaagttgtgtcctataatgaaatgttattgcaatcttgccatatattttgcttgaaaataattgggctcactaaattttgtctgtagttcttatcctatcttcctatatagttggtacccactaaggagcatttactcctataaagcaagacatgcaagaagccacatcatcaataattctaagccatcggatcacattagtacatagttatcagctgttggatcaagaagctactcatccatctaatttaatcattgattactcatccggtcatctccctttagatcataatcacacgtgacattgttatccattcttcacataatactatgttttctcctcccaagtcctccaagataatggaaacttatctcctttatttaatacaactcaaattattgtataacatgtgagttttgtttttgttataaacaattggataacatagaataattaggcatcattaacccaaacctattgttgaaacaagcttgagataaaagcaaagaggttcaaactaccctaattatgacgatatccagattgtgcaagaaaataacttccgtatatcataacaatacacaatgatgttttaaagaaaaataaaacatgaattgtttgcatattttcaagcctgagaaccatatttctctatctcagattccctggtggtgttacacactccttcactggaactgcagaggaccgtgataagcttctttcctttgaagatgtttataggtcatctccctccctccccttgatgttacatatttgcacgtggtgcaccttgataattatagaacttaagagtaccacaacacttctatttgtagtcaaagttcatttcaatttctgctgcaagttcgttcttttttggtgaagatctccatttgggcaattagatgtgaataaaaatattagtagcaattaaaacgttttcattccattataattcagttatgtcaggtaaactctaataaggttattgttcagtaagcatttgactggcctgcaatgcatgaacacctgaagttattatttgcttttcatgctccttttacttggttcttttcctgaggaaacacagtagaagtaatgctcatcattctgagaacattaaactattttgttattaccacatgcttgttgaaatgtcttacttgactaataaaatactgaccattggcagttcaatatgatgttttgcagatatttatttggttagcattttccatcgatgcagaatcatttgcccagattttaagctaaatcaatttaaattcttatcataatcaatcatgaatctttcgatggaacggaaattgatttcatcaaccttttcttttgtttatactttacacttgcacctaactttttccgccaagaaaattgataactgaagatacatcaatcccaggcaagttcttgaggttgtagctggatgcaaaggaatttctgacattgaaggcttaagtaaaactctgtaccacaacacgtgcaggtaagctgtccgtgcgtcatgccgaaactttttgctgtctggtccaagtactcatctaatgcagtcaatttctctaaatttcacgagtaattttgcccttgatgctacagctctgcacgtctccaatttccatcagatcatgttattgagctcaatctttcatttctctgccttgcaggttcttcttccctcaggacctggatgcttctgctgatgcacagcttgagagtggtgcggctattcaaaatagctga</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0165800, RefSeq:Os08g0165800