Os09g0413700

From RiceWiki
Revision as of 07:25, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0413700| Description = Conserved hypothetical protein| Version = NM_001069701.1 GI:115479144 GeneID:4347051| Length = 4967 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os09g0413700

Description

Conserved hypothetical protein

Version

NM_001069701.1 GI:115479144 GeneID:4347051

Length

4967 bp

Definition

Oryza sativa Japonica Group Os09g0413700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:15365295..15370261

Sequence Coding Region

15365382..15365555,15367402..15367717,15368090..15368249,15369627..15369794,15370069..15370261

Expression

GEO Profiles:Os09g0413700

Genome Context

<gbrowseImage1> name=NC_008402:15365295..15370261 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:15365295..15370261 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgccccaccgccgcggccgccaccgccgccttcgcctcaccggtcgtcgcggttcccagtcgcgcggccccgctcgccgcccgccgccgcctccgccgcgcgaggcgcttcgctgtccgctccgtcgcctcccctccaacggtccccaagcccgcggctcccccctccaagactgggaaatggcagtggacatttgaggataagccaataaacatttactatgaggaacatgagcatgagactgctgagaacgtgaagaacattcttatgattcctacaatttctgatgttagcacagtggaggaatggagggtggtagccaaagatattgtggcacgaaaaggagaattaggttaccgtgctacaattgttgattggcctggtctgggttattcagacaggccatcactgaactacaatgctgatgtgatggagaattttctggttcagttaattaattcaccaaatagtcctgtggcaaatacagatggtgaagtggtagtagttggaggaggtcatgcagcaacaattgcagtccgtgcggctgggaagggccttataaggccatctggcattgctgcagttgcacctacttgggctggaccccttcccattgtatttggccgaggttctgatatggagacaaggtatgggcttctacgagggaccctcagggccccggctattggctggatgatgtacaatgttctggtgagcaacgagaagtccatccagtcccagtacaagtctcacgtttatgccaaccctgagaacgtgactccaaatatcgtggaaagtcgctacgagttaaccaaaaggaatcattctcgtcaggtagatgaatgtgcagttacgacaactacggcagggtcaaattcaacaacatcctatactcatactgtactagagcttgtagtaacagaagcagcagcatcaattcctgtctgggtgccacatttccaagcttggcaaaccaaccacaattccatatatacagagagtgtgtgc</cdnaseq>

Protein Sequence

<aaseq>MRPTAAAATAAFASPVVAVPSRAAPLAARRRLRRARRFAVRSVA SPPTVPKPAAPPSKTGKWQWTFEDKPINIYYEEHEHETAENVKNILMIPTISDVSTVE EWRVVAKDIVARKGELGYRATIVDWPGLGYSDRPSLNYNADVMENFLVQLINSPNSPV ANTDGEVVVVGGGHAATIAVRAAGKGLIRPSGIAAVAPTWAGPLPIVFGRGSDMETRY GLLRGTLRAPAIGWMMYNVLVSNEKSIQSQYKSHVYANPENVTPNIVESRYELTKRNH SRQVDECAVTTTTAGSNSTTSYTHTVLELVVTEAAASIPVWVPHFQAWQTNHNSIYTE SVC</aaseq>

Gene Sequence

<dnaseqindica>88..261#2108..2423#2796..2955#4333..4500#4775..4967#gtcgacggcagcacacgtcgttcggttcctctccactccaactccaccgttgctcccaccaaacctcccactccttcctcaccaaccatgcgccccaccgccgcggccgccaccgccgccttcgcctcaccggtcgtcgcggttcccagtcgcgcggccccgctcgccgcccgccgccgcctccgccgcgcgaggcgcttcgctgtccgctccgtcgcctcccctccaacggtccccaagcccgcggctcccccctccaaggtgagatgagatcgcctggtactcacttgctcgccgagttggccgcggccggtagtcatgtactatttgttacattggtgcgcctggtggtggatcgagctcaccggacggatcgccaatttgggtggtcagtgaatgcgttgaagccatgcaatccacacggcactaactgcttctgtgcggttttgtagatctcaaattggtgggtagtagtaattagtaaagttcccgtgtcgacttgtgagtctaaagtatgaacaagcagaattggtaatgctaaatgtgttctgaaatgcgtagttatgcaggttcgaataaaatcccattgatgtttgcaaaactttgctctgatcgtgaacagaatagaacatttgggatctagttgcttaacttttggcgcaaactgctgcttattttgacctgaaacaacgcagttttgttaacatgcatttctgttacagaatacatctagcgaatccttgaactcccaattacgacgagctgttcttttgttaaattataagatctagtttttacgtacgtgttcttgtgttagtctagtaattgtccgtttagtttcagagtgctaggttaacagtttggaatatctagttttgtctcgttagtttcttttcataatcagtgctatatcttcccatcattagatcaatcctacttggcctctactgaagtgattatggagtagacaatttcagggaaaattggaattttattacttagctgttgacacacatgcatgcgcttggctgattgcatagtgtgcatgatctccagttctccatgagagggaattgttggcaaattgctcctatggttaaaacgaggaatgcgattcaaccatatggagggacagaggcaaggggaatttatcaccctgttctcttcatttccttcctgggatatcttttgaaaattttttcctaaaagaagataggttaatgatccatcacctggtagatttacaaaaatgggacccagccttacatttttgagatatgcaggttttattttcttcctgtcatttgcatgcttttatcttgggccctaccttataaacatgatgcctcctgctctgttgggtccatgttactcctgtttataattgatgccatttttttaaccctaaaaccaatgatatgaatgccattggaaggaagctagtcatgaatggttttgattgttgaagggtgagaaattcacaatttcaagaaaggtgactctcaactgccagatcatacaagaatgcttgtgggggttcggtcaaataatgggtggatatattatttttgtgttcttttgggagcatagaagaatagatatggcaagagatcagaagttctagtggtatgcctttttctatatttttgtttgcctgtggtagagcgcctcaccagtgggcatggcaagactaggaagaaggatgagagggggagagggttttttttttagataatggaatataacatcccggcctttactcaagagagctacaaccaattattacagagggggagaggggttaaattgcccataggggcaaatatgaataattccattgttagagcagcaaaagaaaaaagatttacattgtttataatggcattttttttaatgaaacagcactctttagagtggcaaatgatcaattgtccttgtctcaattgttaatgttcagaatggatttcagtcaccacagtggcaagtactgaaacactagattttgaatgaaatgttttggatgtagttgtatggaaaattttgttctgcttttctttgttgtttgactgtgacactaagctataacattacatacatgtgtttctagactgggaaatggcagtggacatttgaggataagccaataaacatttactatgaggaacatgagcatgagactgctgagaacgtgaagaacattcttatgattcctacaatttctgatgttagcacagtggaggaatggagggtggtagccaaagatattgtggcacgaaaaggagaattaggttaccgtgctacaattgttgattggcctggtctgggttattcagacaggccatcactgaactacaatgctgatgtgatggagaattttctggttcagttaattaattcaccaaatagtcctgtggcaaatacaggtatacaacattttcatcttaaagcgcactgatagtctgatactgtaagcatttccactgtattttttacctgattcaatacactctacttcacttgggcatattctgtaatgaacaatacatttctttcttctggttcttatattatagatgactactttatctgcatattgttactgtaatagtcaatgattcaactagaaatcaggattactcatagccaaggttagcagtactattacccaatgcaactaaaacagtgcagaaaacatattttacaaaaatattccagttaatacttctgtaacaacacattttcttgaatatcattactcaactgatggtgccattgtaattctttatcatgatcagatggtgaagtggtagtagttggaggaggtcatgcagcaacaattgcagtccgtgcggctgggaagggccttataaggccatctggcattgctgcagttgcacctacttgggctggaccccttcccattgtatttggccgaggttctgatatggagacaaggtatagactaagtgtatagctttgatattacaaatatttgtcagagaatgctaggaaaggtcctcctatcacctttgctctttgatttatgctcagcattatgcggagtggtttttttggtaagataatttcaaagacaacatcagtactactataaaaaaggaaggtcctcatcagttgcttacagcttattataaactgtaacagcttattaacaaccaaaaattaatttatgggtaaaacttttttatatgtgtccttagcgacttaaaagccaatgctgaaaaagaaactatgttgaaaaaacatcaaaatcaatttcgaaatcaagtttagaaatttaaatttcagcagcagcttataagccatggggcaaatgatgaggcccgaacacttgatgctaatatgaaatattatcttcaccactacattttcagcaacagtttgcattttcgatgctccttgttgataccacacacactatttaagatctcgtcctgcaggttgtaatcctgtagtatgtattacctatcccttcataaatacaaatataagatgtaaatatattttgtgatatgtgtgaattgtgaatggtaattgtaatctgtcaagggtaaatgggtaatagtgcagtctcatgtgtatagatgagtaatttctagattttttgtcttgtattctatatagtaatccttgggctcttgcaatagagccatctttcatgttgtcatccgttgaattgtgtatacttactgacctatctcattaaatcaagaggcacatttggtagatgggtgatgggtaagtaagtattgcagtgaggttatgatgcattgcaactgagaaaatatggttgtgtttatgcagtcaagccactagtaatatagtcttggatgccatttatggtttgaatatgtttatggtattgcatagatgaagtgccagtagcaactagcatgtttatgcaggcatttcgttttccatgttgataaatacatatctgtgtgttatactgtcgttgcatacagaaagtgccagtgccatgtttctgctggcactttattttccaaattggttaagaaagctactgatttgattttccattagtcgttttcattccttttacgtttattagtacaattcatttaactaatgatatatttgtgtaactaatcagtgagatgtagtaaagtacatgtaacaaaataacaattaatggtgtatatatatatttttacatttttgaaaactgactgatgtagataattatgtgataacatgttcccgttgagcctttttacagacatctcagccttttgtttctttagatacaaaattgatcatgctgaaaattgtttccctaaccattatcaacaggtatgggcttctacgagggaccctcagggccccggctattggctggatgatgtacaatgttctggtgagcaacgagaagtccatccagtcccagtacaagtctcacgtttatgccaaccctgagaacgtgactccaaatatcgtggaaagtcgctacgagttaaccaaaaggaaaggtgcacggtttgtcccggctgcattcttgacaggccttcttgaccctgtccaaacaagggaagaattccttcagctgtttgccaagttggacggtgacgctccagttctggttgcatcgaccgtgaatgccccgaagaggtcgaaggctgagatggaagctctcagaggcgccaaaggcgtgacaaaattcgtggaggttccaggtgcccttctgccgcaggaggaattcccatcaccagtcgcggaggaactctacagctttctgaaggaatcattctcgtcaggtagatgaatgtgcagttacgacaactacggcagggtcaaattcaacaacatcctatactcatactgtactagagcttgtagtaacagaagcagcagcatcaattcctgtctgggtgccacatttccaagcttggcaaaccaaccacaattccatatatacagagagtgtgtgc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0413700, RefSeq:Os09g0413700