Os08g0169600

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Gene Name

Os08g0169600

Description

RNA polymerase II transcription factor SIII subunit A family protein

Version

NM_001067622.1 GI:115474980 GeneID:4344764

Length

3851 bp

Definition

Oryza sativa Japonica Group Os08g0169600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:4064434..4068284

Sequence Coding Region

4064987..4065157,4065251..4065394

Expression

GEO Profiles:Os08g0169600

Genome Context

<gbrowseImage1> name=NC_008401:4064434..4068284 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:4064434..4068284 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagtatggaaggaggaaacctattagcttgctggagctgtgcatccgtactaccatggataacctgaggtatgtcgataacgtggacggcgtggagatggatctgctccagagaatcctgcctcactgcaagatggaggacctgacccgtatcgagaacaataccgagatggatcttaccccagttactgataagctgtggaagctattctatacgcgacaattcggcgaggaaaatgcaaaccaagtcgtcaagagaatgagcatgagcggagcgcggtacaagtggaaggatctcttcgatgtaaaatag</cdnaseq>

Protein Sequence

<aaseq>MEYGRRKPISLLELCIRTTMDNLRYVDNVDGVEMDLLQRILPHC KMEDLTRIENNTEMDLTPVTDKLWKLFYTRQFGEENANQVVKRMSMSGARYKWKDLFD VK</aaseq>

Gene Sequence

<dnaseqindica>554..724#818..961#agcgcatcaacgccaaaaatgggattcatcggttgaactcaagatggaattttgatctcctcggtgttcttcttccctccagatttggtcactgtcgcgggggaagagagaggcggagcatcggaaagcaggtgaaattttgtggggggatttgttttttatctttgtttgttttgtggttgcgttgccaaattcagctttcctcgccgtttggggatgattctagctggaattccgctataaagatcgctccttcttgagctcacgatctgtactcatctctctctccaacccttcccgatctgcagatcgagccggaggcgccgcggcctcctcccccccaccggcgcctcggatcgaatcgaatccaatcgaaggtattcgttcttctcccatagccctctcgagctggattggattggagattcatacggcgttggattcatttcttccccttttgattgacccatccagtttgcacatatgtttcttgctgtaaaaaatcagctgtttttattttttatttttaattaatttgttgttgtgatgaaggatggagtatggaaggaggaaacctattagcttgctggagctgtgcatccgtactaccatggataacctgaggtatgtcgataacgtggacggcgtggagatggatctgctccagagaatcctgcctcactgcaagatggaggacctgacccgtatcgagaacaataccgaggtgatttcgataagattcgggtttcgtcggaggcgatattccaggttatcttgtagtagtagattggtctgacattgtgttttggttggatagatggatcttaccccagttactgataagctgtggaagctattctatacgcgacaattcggcgaggaaaatgcaaaccaagtcgtcaagagaatgagcatgagcggagcgcggtacaagtggaaggatctcttcgatgtaaaatagtacctttttcatcactcttttgttgttttggttggctgtggatgtcagggttttaggagaaagaattatgaaggactaaaattctaaaagttgtacctgttatttgtaggccaaaacaaaaaagcagaaggaatatgaagaaaagatgggccagaggcttgctaagaagtatgaggcagcgaaagctggtaaggtggttatagttctgtattgaaagtgtgcaaaatgaattgatatgtgtcatgctgataatagaatagctataggatctttgatagcttaatgaatatatgttatttgcaaatgagtttggacagtaaattggtcgatatctccagttggcgcttcagccattgagaacgcgagcaggacaaaattacaagacagcactttgacttgttctgatgtattgccttttattttggtggagttacaagtgacatctcctttgcttctagggcctatctatagtgctgggcgaggggacgcagaaccacagatcaaccctcaaatacctatacatggttgagtggcttcatagtacctcgccactccatggggtccattcgccaaaggcacgatctgatgacattgtgaggggtcctgccgaactcataggctgttcacgctattgactctgctcctgggttacatccaggatgatccactcatgccactgctgacctctcccactttgcatcttgggcctctcgttgtattgatatcgactcgactcagattttgtccggggatcaccggatcaatattctttcctcgctgctagaaagggctggattgtatccactggtggctttgcaccacgaggatgaactaggatgagtcataacggtagtcggtatttctatggtgaacaaggatgtgtgaggagccttccctccacatgttttgtttatggaatttaacaaattttcctggtaagtacagcatgttaaaatatgaattacttttgccaccctagtcgtaatgtcattaacttcaatctgtcaattacttttgcagaaacattttcttgctgggtgtctccagattgtatgtgttagatacggattaactcttgcgctatgaaataagcatttaattttgcaatggaagtatttggctggcataataatttgggtctttgatggtggattaatttttcgtttagtggtactctacacttctattgtaagctacttcaaatagaatgaatcaaatgccattgcaaactttcacggaagtccacaaaattagctttttgtaagctaccacagtccaataaaatattgattttcccccttcccgtctgcattttatttatttacgctttctaccattagaaatgggtgattcttgagaagaacctgaatgcccactgccagttcatgctctccacatgctatgccatgtaagaatcttctgatgatttgtgttaatcccttgagttacggtgaaattagcaaagccaaccgcaatctgtatgattcatagattttttttttgttcttataaggtccatttataggccgcaatcgcatacatttataaatggaatctgtacttatgaaaccatctttaattaacgttgaattggaggtaaatattgcaaatgtaacctagtgctgagattagctgagctgtttgcctcaaaaaggggtatcagaatcctccattagagagtgcaaagaaaggtttatttgattcctgtctaatttgattagttaattcctagttagaagaaaatctagcttcttcttgtgacaacaagtaattatttttgttattttatactagtatccaggatcagtatcattcaagttctaactttccttttcttttccagagaaacaaagtaaacaaattaaaatttgtacgaaggtgccaccaagcagcaaaagaagttttttcggaggtagttttctttctcagtttattctggattctgccttgcaacatattatgtttcccatacttactaagtctccacaggaagtggacccagcaacctatccagctataagagccctattcttaaaaaagcaaggatggaggttaacaggtaattttattttctcgtggaacgattgacgtgaaatggctgttttctgaaaccgttgtctaattttgtgttacagtcaggcaaaaatgaaagctgctattcaaaggaatactatagcaaggtttgtctcatttcgacattaacgttttggagaatttcatacatgtttcgtttttgaaataccttgctatttgaacctctcaatctctcatgttatttcactaactctggctctgctttgacaggacatctcagcacataaggatgaactcaaatcatgtacagccaatgaagacaacgactattcatagacccaattcaaccattaccatcactaaaccaactggtccgaataagccattacagagcgacaaacaaactggtctgaataggccgtttgagagcaataaaccaactggtcagaataggccattccagagtaacaaaccaactggtcaaaataggccattgcagagcaacaaaccaactgatctgaataggccgtttcagagcaataggccgaaattctagaggatcaaaccgcagcatcgcgttcttgactccagagttcgccttgcttgtgcagcaaaaacatcaaatttcttgtgcacaagttgtggtagtttaccataacatgaactcattgtgctctaggaaaaatagtcttgtctgaagttggcctcactgagcactcgtatgttgtatctgaagagcatccgtttggcaaaggagaagcacaccaaagtgtaccataaaaatattggttatatctgtaacatacaatttttatcatatgagaaaaggattttattccttgattacttttggatc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0169600, RefSeq:Os08g0169600