Os08g0169800

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Revision as of 12:48, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0169800| Description = Haloacid dehalogenase/epoxide hydrolase family protein| Version = NM_001067624.1 GI:115474984 GeneID:4344766| Length...")
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Gene Name

Os08g0169800

Description

Haloacid dehalogenase/epoxide hydrolase family protein

Version

NM_001067624.1 GI:115474984 GeneID:4344766

Length

10209 bp

Definition

Oryza sativa Japonica Group Os08g0169800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:4077672..4087880

Sequence Coding Region

4077716..4077977,4078079..4078161,4078284..4078367,4078856..4078931,4079059..4079131
,4079225..4079298,4079505..4079598,4079721..4079790

Expression

GEO Profiles:Os08g0169800

Genome Context

<gbrowseImage1> name=NC_008401:4077672..4087880 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:4077672..4087880 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcccgcggcggcggcggcggcggcgcgcggcccgctcctccatctccggcggaacccggcgccacgccttgccgccgcccgccgctccttctcctcttccgggatgcggtgcgtcagcgcggccgcgggcgcgggcggcggcgggagggagcggcggtcgtcgccggcgttcggcgggctgctgctcgacgccgggggcacgctgctgcagctggcgcggccagtcgcccagacgtacgcgtccctcggccggcgatacggtatgagcaagagtgaggagagcatcaaggagggattcaagcgggccttctccgcgccatggccaaagacgctcagataccagggagatggacggccgttctggaggattgtggtggcagaggcaaccgaatgcaccaataatgattatttcgaagaagtatatgagtattacgctcatggagatgcatggcgtctgcctgctggggcttacgaaacactgcgtgatctaaaggatgctggagttaagctagctgttgtatctaacttcgacacacggttacgaaaattacttaaggaccttcatgtctcggatatgtttgatgccattgttgtatcatcggaggttggacatgaaaaacctgctccagagatcttcaagagagcattagatcaaattggcgtagaggccagcaaggcagtacatgttggagatgatgaaactgcagacaaggcaggtgctaatgccatagggcttgagtgctggctgtggggacaggatgtgaggacattttctgagatacaagaccggattctaacaagatttccacaatga</cdnaseq>

Protein Sequence

<aaseq>MPAAAAAAARGPLLHLRRNPAPRLAAARRSFSSSGMRCVSAAAG AGGGGRERRSSPAFGGLLLDAGGTLLQLARPVAQTYASLGRRYGMSKSEESIKEGFKR AFSAPWPKTLRYQGDGRPFWRIVVAEATECTNNDYFEEVYEYYAHGDAWRLPAGAYET LRDLKDAGVKLAVVSNFDTRLRKLLKDLHVSDMFDAIVVSSEVGHEKPAPEIFKRALD QIGVEASKAVHVGDDETADKAGANAIGLECWLWGQDVRTFSEIQDRILTRFPQ</aaseq>

Gene Sequence

<dnaseqindica>45..306#408..490#613..696#1185..1260#1388..1460#1554..1627#1834..1927#2050..2119#gctctctctctctctcttctcctcgccggcgagcgcgtctcgagatgcccgcggcggcggcggcggcggcgcgcggcccgctcctccatctccggcggaacccggcgccacgccttgccgccgcccgccgctccttctcctcttccgggatgcggtgcgtcagcgcggccgcgggcgcgggcggcggcgggagggagcggcggtcgtcgccggcgttcggcgggctgctgctcgacgccgggggcacgctgctgcagctggcgcggccagtcgcccagacgtacgcgtccctcggccggcgatacggttcgtactcctctccccccacctccccatcgaaccaccatttcgctcctcgcgcttaccttggcatttcgtcgaacacgtggcgggcgtgtggcctccaggtatgagcaagagtgaggagagcatcaaggagggattcaagcgggccttctccgcgccatggccaaagacgctcagataccaggtaatcgacatggacacgcagtaattgtgtcatagagcagcaatgttgcttgtgcaagctgtgaaattgtggtgggtttgttgctgaggtgatgatgatttggatgcgggttgttgtcgtagggagatggacggccgttctggaggattgtggtggcagaggcaaccgaatgcaccaataatgattatttcgaagaagtatatgaggtatagcgttattggtcttgtgtggggtgcttaattgtaacttgctgagaaggttattttgatcattggatgaatgctttgctttggacctttggttactgaaggttgataaagagtctgtcctcaaatattgttcgatatctgctgaagaaacgggaaaaacattttccgctaccttacaagtattatggatatgttgttagacaatgataattcagataattaatcttcattattgatatcgggtggctactcattacacttgcccttgtctaattggaatcaagagtctgtgatttgatgatagacaagtaagtgtttttgaagatgaagagctgctttttttttttttgaaaggagggcacactttggtgacatccgataaaataagagttgtgttttggttcaatttaatttattgatgcatcaattgttcatgttgtacttgtaccgtgtgacttatagttgaaatttctcttatctgttagtattacgctcatggagatgcatggcgtctgcctgctggggcttacgaaacactgcgtgatctaaaggatgctggaggtcatataattcatgtattctcttcccttttcagcttccagtattgaattatggcttcagccttcaaaaccttgtctgaaactcttttgtctgcaaaaatcacaccttattaatgtttcaatttcagttaagctagctgttgtatctaacttcgacacacggttacgaaaattacttaaggaccttcatgtctcggatatgtaagtgcatataacattgcactttctaaataccctgctcttataaaattttttgagcaatggacatatgctaacaaatcttgagctgtccaggtttgatgccattgttgtatcatcggaggttggacatgaaaaacctgctccagagatcttcaagagagcattaggtacacaatagcatttagtttgtgagttaagtttttttaaactatgagtaatggatgaattcatccagtactggctaggctgcatttactgaaggtaacacacgcagtctcacaagcaggatgctgcaccacatgttctatttaaaatcagttgatgctttttttttcagtagaactaaaaagtggtttgattttctatttggcagatcaaattggcgtagaggccagcaaggcagtacatgttggagatgatgaaactgcagacaaggcaggtgctaatgccatagggcttgagtgctggtatgcatagtctttcccttctcattcctttcaccatgtagttcaattgtgctgcagatatcatgtctcttcaagtgattgatttcttagtaatgccattatgatgatgccaccatttttaggctgtggggacaggatgtgaggacattttctgagatacaagaccggattctaacaagatttccacaatgacatcatagaaacctcaccgcaggtgatcttcacaggctttctttttttttctctccaaagcttcgttgtcatgaccaagaggcgccaacttttgtaatgtattaagtcaaatatcactagcattggattatcgatgtatttgcattttgcaataaattagcacctttaccagcttgccactaaatgtggtaaaatccactaaaccagcccaacatattacagacacatcaaaaccaattttttcccgctcctatgcctgaatacactagactccagactagtgtccatgcgaccatgcctgaaaccaaacatggtcaaacaggctgtagaaatatcactcctgaacaaacagaatgaaattttaagaaatacacttggcttccaaacacagtttattttcatgcatgactaagagtaggcagatactatatctctgcttattgtgtgacactgacatgatcagaagattatttccttgtccctgtcaccttcttccagcatggtctctgcaatgtcgatagagatgccgtgcttgagctgcatgacttctctggcaaccctgtactgcttttccagctcgccgtttgatggtgttagtccgacaccatcttatcttcaccatatctcacaatttcaactctgggactgtttggatggatccatgtcacctcccttgcagtctcctctgcttccttgacctccctgagactagcattctcacagtttatggagatcctgaatttctcgacatattggttcctcaacagccaagagaatttaatgttacgacctttatccttgatcttccgtacattgacatcacggtgaacaacttcaggctgagagtgggacaccaatttcaagtaagcaaagctgtgttatcgtgtaaagtaaattaagaacaggtgcaggcatgcagctagcgtaggtccttaggcttacacggtgtggttctctttatgaacaaattgaacaggattgttttaaaacgaattgcgttctctatacaacttttcaatcatttctaggatacaaattattttctatttagcttacagtgattaatatggacagttacaaggtggatccacacacagtcaagtacgattttatttttgggtatttgggtttactttctaaaccttatgagctagcgaatgtggtgtctcttttgcctctttctcaccctattttagtagtacaatagatggaaggttgaaatcaccatagcagcacagcatgcatgcttgctaagtacctccataaataggaatcaaatggagaagaatttatattgttagctactagtaataagggataggattggagactaaaaacttggtaaccaagtcaactagcttcataactacttgtaacaagtacaacaatgggggattaactcttttaatccagtagagatcacagaggcgatttacctcttgatgttggtcagacaacaccatcttatcttcatcatatctcatcatgtcaagtgtgggagagttgggatgattgtcgactgcgcacctcgcagccgcctctgctttctccacctcctgaagcgtagatcctcacagaagatggagacaccgaatttcttgacccatgggttacgcagcaaccaatggaagtcaaagtaaccgtcgtcatccttcatctcccgcacattgacattttggaaaacaactttaggattgacacttgtaggctgagtacggcaaaataagaattgaatggacaagtaagtaagataaactatgaattgtgtaattccgtaataaattggagaaaactccttctatgcccaagcacaagagttggacggaattaaaatatatcatgatcccatacaacaagttatgaatttagtgtgaaccttgcacgacaacttatactgccaacctaacacaccacaaatcccaacatccattcaatgctctaaggtaaaatggacctttccataactactaaatggtcaattgcctgtcaattaatggaatgagtatttatgggaccaaaaccaaaatttggggtcttagaagggattgagtagaattcgcgggtatgaaatggattgactgaaattttagatgcatgtaaggaattttctcgatcggctggatacatcttcaatgtagactgtagaggatgaattgaattccattattgaaaagctaaaccatggcacatactaagaataaaggaactaaacaagagaagaatgccacatcgtgtggctagctggcagctcagaccctgatcaaggcttataattaatcgcaggaatggaaaagaaggaaagaataggtgaattaagagaacaaataaattgttgaaaccacaaattccaatcgatagatgtgtgtgcacgtacctctttgtaaggtgaatgtatcttactgtcacccagtcttgtggttttaagggtagggcggttgggatggacagcagccacttgtgccagcgctgcctccgcttcctccacctccgtgacacgggcacccgaacatgccatggtagcttcaactcttcttagtgaagttcttccatggttcccaaagccaagcagcttgtcaaaaccaagtaggttggcatctcttaggaacagcacacggacaaaaaactcgagggattcaagccttggcatgatagtctttgtgctgcaaatgacaccatgtagatcaaaccggagaaatgaacagggtgtgctgaaatatctcaacttccgaaagtagccgtcaccagcagccttctcaacgctgaccacatgggttttacacgaacacagttttaggtggcggagctctggcaacctcccaagagtttccatgtcctgttccttcacgatctgcacttgcaaatctagatagcagaggtttggaagaagtaacgggttaatccccacaggcattctatagaacaccaaggatcgcaatcgcaggtgtcggaggcgtcgaggggaagtgaatcctgcttcccacatgacactcttcattcttgatgagcccccaatgtcaatagtatggatcttgtgtagattttgtagggactccagcaaatctctatctgttctctcatcctgtccatgagtaaaaaggctagtatgaagcacccttagttctctcagcttgcctagcaccttcacaaactgacttatatcagcgggacatatccacatttcctgcagggatgtcaacttcacgatcgaaccagccgacacccttgtaccctcattagctcgtagggacaacagttttgtcagcaagcccactgactctggcaactcttgaattccagtccccgatagatccagtacctgtaaaaattttaaatctcctacttcatccgggagttcgctggttcgaacattttgtagcccaaggtacctaaggtgatgtaaatttccaaggtgctgcaaaatatgtttacagtaatagttccgagaaaaatgattttctagagctaatacacgtaagacatgaaagcttggagattccacagtaataccatcgcattcactcacaacaaaggacctcagttggtccacccccacattacccaactgatgtctgttctcttcaaaattcctatgctgcagggctaacctgcgagtcttgatccttggagattcctgtttctcactgccgtccaacacagtgacaaagttttcttcaaatgacaataaacagatcatatcaagcaccatatcatgaacacggcaaccatctacataccctttgtcttcagcctccactggctggatcatgcttctgtttatgagctcattgaagtatccctccccgagttcaaataaccctacaccaggtgcttgtttctcatgtacgaaaccctcagctatccacttccatatcaacaaatttttctcaatataataatcttctggaaatatgcttagatacagtaagcaaggcttcagatgcaaaggcagatcatagtaactcaaagataatatccttctagtgttttccacatcatcattgcctccatgccccaagacaatagtgctgtacacttcagaccaatcctcctgaggtttattggccaatagactagctattgtaatgatagccaatggcacaccgccacatttcttcaaaaatttgtcacatacttcaaccaacgaactatcaagacatttcccttcaccctgaactattcttgtatacaataacttttcagagtcattacgggaaagtggctgcgttttgtaaacatcacccacatatgtggcaacttcaaaaacacgagtagttacaactactctacttctgtgattactgtcttgtagagcacatctgatcaacccccatgatttcttatcccacatgtcatcaatgacaatgaaacacctatagatccgcatgacagtgaaagagccccatgagctagaaactaaactagagaaagaacatgtttgtttaggtaatggaatgctaacattgcaactgctactgagagaacatacacaggcaagaaagcacaccaaccctgagaaaccaaactgtaacaattttattttttcaatctgacaattatatgtagattagtgcagttaaaatcaaacttatgtgctacaattaggccaatcttaatatttgactcaagtgaattatgcttgaactgcaacgcgctattaaattgccttctgtataattccttggaagattagagcaatacttttctcaatattatctcatgttttccccctttctatatgctgcaccttttttgtgtatgaatgcattccacctacacctatccataggctacgaacgcccctcaaacaccagccaatccacggattatggacactatatgctttcaaggacaagaatggttccaccatggtctacggattattatacattcccccagaaaccttcttcagtttagaaataattccatagttgtttttctgtctcatactctatttttttagaacttctgtctcatacatgatattgtggtcaagggactggaagtcctgtggcaacaccaggtaaaaggaatgtaggaaaggtttaattggactcagcatccaacatttcagccaggtagtagaattaagtaactaagatctaacaatattggagaacacattgtttcattattacagaagttttatgaataggaatttggtgatatttcgtaatatgcaagatagcacaataaaatggtgtagccgagaagatgaactgatccatctgtgtaaggtgcgagataatttagactaagcatggcggttcgaaagagtttataggcagaggttatgaacatggagtgttatcttaatactgatcaccaatggacatctatttaaatcaatctgtctctcttaacacactgacatacactaagcttttataaccacagaacacacaaataatgaccatatttattttggcttcgcggaatatttcttttttcatagcaccaatcacatgctgtcaactcctattatatatatatatatatgatatcaacgataattataggaaactagttacctgagtttttcacaattttatgaccaaacactaccacatatttaaagctatgtttacaatgtgggctgtgcttatttccaaaaatacattcatatatgttacgtggttgtatacttttgtattgactcaaatataagctagctagtctatgtagtatgtatccactaaaataataagtacttaatatttcaactggttgttttgtcgatgcactgtcatttcatagaactcaatatgatatatcagagcaagagatattgagcttcaatcttggttggcacaattaaataagaatattgaaacccacttttattctagatatgattaagggatagagctcgacgtggggctgctgttaaaatatatataactatataagcaaactacttgattggcttagtgtctgtttggattggaggacgtgctggtgcacgtaacttataaccaccaattaatcttgtaatttctaaccttacagagtgaatattaactattgttaaatttatttcaataatttcattgatatttgatggatctagaaaagtcttgaaaagtttttaagatatttttacaaatggttgctgctggagttttggaagtgatatgaccatttaaaagttgagacttagagtaatatagctgatgtacagtggagatacatgggtgaaagttgggcgtagctgcatatataggtgacataaataaaatattgtacagctactgaaactaaaatcattatcatcgtataattgttgcaagccgtggtcagatgattatattcttacctcttttcctggaggatttcctggagtttattgatgagctgcctttcatcgaacaaggtgatattaaaatctgtataggtcttcttgtcaagatcaatgataatatccctaaggactttcttcatgtcagggttctgaccgactggaacaaaagccccacaatcaaaacctggtttaagcttttcatagactgctttgacaagagttgtcttgcccagccctccaatcccgacaacagagaccaccctcaccgtcttgtcgaacaaatctatatcattcccaagagacagcatctttatgagattgtccatttgcccttcgatgccgacaagctcagttgcccttttgtacagattcaggagccgaggatcaatgtcttctgggactacaggcttggtgacgatgttattgaccgtgtacctcccacgccttgcagccacctcctcaagtttctcgttgatgtcttggatggctccagcgatctctcggcgagccttggtcttcttgaacagtatgctgatcttcttcctgaggcggcggaggatgtgggggtcggcaggatcctcgcggccatcaatatgcaccatgaaagcgtcgatgatgtcctccatgtcataggacgcctccctgagatcccacgcccagagcttgaccagctggtcaagctgctctggtggcacctggccaaccatgcggaggacgacatggacgctctcaagctcccacgagagagactcgatcttcttctgcaagcctgcttgcaggccatactcattgaggagctgacccagcttggggagaaggctccccattgcccctgtcactagctccatgcttgcacactctttggctcttgcaattaagcaacagatatggttgagtttctcacccagatttctgttgcattggtacctttggagtaccaagatacatatatatagtgttgtggattaacaggtcagtactgtttgttggatccatttgatgcagcttgccaatctgcactgcatgcatagttgtcactcctttttttttttactcttaactgtctctggcaactgatgcatgttacgggacccgggtacacatataacatgaccactaattctcgcctaactatatgtttatgaaactagaatataattaataatgtgtgtatacacaataaaccaatttatatgaatcgtaacatcacattcctatttaacaccatgagtttttacgcacttggaatgtatttacaaggtagaggtatttcttgtgtaaatttggagagatattatggctccttatattaatactactagtcgtctatctgcactgtgacaagttttgatgagagagtgtcagtaatttgtagtgctatagggaatttttttttctgtagaatgtgtgtcaatttttcacatttgatcaggtatatattgctctgaccatgcatgcaaggatgatcaggatgaacgcttacatgagatgatacacatgtgtggtccccggcacagaagagctgatgagcattaatcaaactttgagatcttagggatgataaactgttgtcagttgtgacgaacaatttggctataaattgtggtctcatgccattattgatccccctgaaagttgttatgtttgtgtactgttgactcgatccaacgactaactttttttatctccatgacatttacatgtgtcaaaaccataggtggttaaatttgtatatatttacaaacttgtaaacgtcatttgacagcagggtaaacaggaagtagattttctt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0169800, RefSeq:Os08g0169800