Os08g0170700

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Revision as of 12:48, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0170700| Description = Disease resistance protein family protein| Version = NM_001067627.2 GI:297608051 GeneID:4344769| Length = 8534 bp| ...")
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Gene Name

Os08g0170700

Description

Disease resistance protein family protein

Version

NM_001067627.2 GI:297608051 GeneID:4344769

Length

8534 bp

Definition

Oryza sativa Japonica Group Os08g0170700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:4133297..4141830

Sequence Coding Region

4133297..4133611,4134192..4136208,4136481..4137359,4137925..4138201,4138295..4138349
,4140176..4140396,4140927..4141053,4141825..4141830

Expression

GEO Profiles:Os08g0170700

Genome Context

<gbrowseImage1> name=NC_008401:4133297..4141830 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:4133297..4141830 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagagaggagagaaggagaagaaagaaatgtcttcagtggttggaaaggaggttgtagatgcttcctcacttatcactaagggtgatatgaaggatttgctagaggatttgttgaagatgggcatgatagtgggtcatgtgagctacaattgtcccactcctcggaacattggcggcagggggttaattcgaggagggcatggtggatttggtggaacccgtggtggatttggaggagaccgtggtggctttgggggaaaccgcggtggtagaggaggtgactggagaggtcgcggtggaggtcgtggtaggacagaggttctcctcaggccaatgcagccattgaggagggtagtggtgatggtaaatctatcatcatttttactattaccacctaataactacttaaattatccgcattggctccacctctctcctcccctctccgcgtgggacggtgtccgtggcgtcgcggcatcggccacgggcgggacaactgttcctgtgattaatccggccgtttccgcggcggatccagcatcagtggtgggcgagaaactgaaggcggccgttcttgcagcgaacccagtgttggcggcatcggcaatgggcgggggtagtatcggtcatgttggcggcaggcgaggcggtcgttcttgtgtcagatccggtgtcgacagtgggagaggagctttctcgatcgcaatcatggagctggtgatgggggcaatggaaaacctgatccccaagttgggtgagctgctcaaggaagagtacgtcatgcagtcgggcgtgagagagaagatccagtctgtctcacgggagctcgagagcatccacgctgctctccgcaagatcggcaaggtgccatgggagcatcttgacgatgagttgaggctttgggcgcacgaccttagggaggcgtcgtatgacatggaggacatcatcgactccttccttgtgcgcgtcgacggccatgaggcaagtgaagttcactggttcaaatggttcttggagaagatgaccaaccagttcaacaagatcaaggctagccatgaaatcggtgtcgcaatgaaagaaatcgatgagaagctccaggaggtggctaccaggcatgcgaggtacacaatcgacaatattgccatcaatcctgcaggcccagcaactgtcgatcctcgtctcttgagtatgtacaaaacattggcagagcttgttggaattgaggggcccatggatgagctcatgaagatgttggatattgatttgccgaccaagaagaggaagatcgaaatcgatgtgtccgttagaaaaccgaagatggtatccatctttgggtttggaggacttggcaagaccactcttgccaaagcagtctacgacaagcttaaaccaagttttgattctggggctttcattccggtcggtcagaatcctaatattaggaaagtttttagggatattctcatggatcttgacaagcagtcatacaatgacttaaatctaaagctgctggacgaaaggcaactcatcaacaaactccaggaattcctccaaaaaaagaggtgttttgtagtcattgatgacatatgggataaggattcatggaggttaattagatgtgcactacaagacagtaaccatgaaagcagagtagtcacaactactcgtatttatgaagttgccacacaagtgggcgaagtttacaaaatgcatccactttctcatgatgaatcaaaaaaattattgtacacaagaattattagcggtgaaggtgagtctctccgtagtacatcggttgaggcatgtgacaaaatactaaagaaatgtggcggtgtgcctttagctatcatcataatagctagtctgttggccaataaaccaagggaatactggtccgaagtgtataactctattggtttagaacatggatacaatgatgacgtagataatacaagaaggatattgtctttgagctactatgatttgccgttgcatctgaagccgtgcttattgtacctaagcatatttccggaagattattatattgagaaaaatttgttaatatggaagtggatagcagagggttttgtacatgagaaacaagcagcaaagttagggttatttgaaaccggggagggatatttcaatgagttgataaacagaagcatgatccagccagttgagcatgaatactcagggtacatgtgtggttgccgtgttcatgacatggtacttgatctgatcctcttattgtcaggtgaagaaaactttgtcactgtagtagatggcagtaaggaacatgaactttcatggaaaaatgcccgtagattagctctacaacattggagttttgaagagaacaggaatcagttggctaatatgggtgtgaagcaaacaaggtcccttattatgactgagtgctttgataagaacatgcaattaccgagcttccaagttttacgtgtactagaaatacaaaagcaaggccgttggtggaacattgatggtaaaattaacctgcagcatgttagaaatttacttcaccttaggttcctccatctagattgtattgattctattcctctcatagagcaattcagaaatttgaggtttctacaagtacttcatctgaaggaatctaacatacaagagctgccagagtcagtgggcctgctaacaaaattgctgtccctacgtgttgatattgatgtaagggtgtcgcctggtgtgatcgagaagctgacgtccttacaggagctgtatttgtggccttatagtgatgatacgttccagttcgtgaaggtcctaggcaagctgagggaactgagggtgctgcatgctaaaaaccttaagcttgatggacagggcgagacatcagcactgctggagtccctatgcaatctgcacaagatccaaactttggacattgacctaaatcttaatccaaatgagggtgtcacgtgggatgcaggattcacttcccctcaatgcctccgatacctctgcttggtgtctttgaggtttcatagaatgccagagtggattaattggtcgcttcttccaaacctctcttatcttgaattgagagtgaattttttggaagagctagaccttgaaacccttgggaggttaccaaaactacgatacctccatctgtttatacactgcgacaggatagtaagcatcgggaagattgccggtgctggtgatgcctgcttccaagagttgagatttttgaacacaccctacttgtatgtccggtttgatcagcatggcatcatgtgcagcaaagacgaaaaagctgtcatgccaaacgtcaaaactctcagtttttgtgtttatgtgcggatcctaaaagataccgacatacttggatttgacaagctgtttagcttcgctcatcttggaagaagttcgctccaacaagtccaagttaacatccaatgtcgtggtgctcgtgccatggaagtcgaggaagcggaggcggcgttggcacacgcagccgccatccatcccaaccgtccaacccttcaaatccataagttttcggagggagaaatgcttccccctcacgaggagcctagcagcttctttcctaaagttgttgtcgaaaatctcaatgcgcatgagagaaaggacgacgatcttcgttttgtcctcggacagatgctccagcgtaatccatgcgtaaagaaattcagtgtctccatcaactgtgaaaatgcatgtcttgaggaggtggagaaagcagaggcggctgcgagatatgcagtcgacttccacgcaaaccgcccgacacttgaactggtaaaatatggtgaagataagatggtgttgtctggccaacaccaacaggtatgcaccccaggttgcctatctgattctaatccctag</cdnaseq>

Protein Sequence

<aaseq>MERGEKEKKEMSSVVGKEVVDASSLITKGDMKDLLEDLLKMGMI VGHVSYNCPTPRNIGGRGLIRGGHGGFGGTRGGFGGDRGGFGGNRGGRGGDWRGRGGG RGRTEVLLRPMQPLRRVVVMVNLSSFLLLPPNNYLNYPHWLHLSPPLSAWDGVRGVAA SATGGTTVPVINPAVSAADPASVVGEKLKAAVLAANPVLAASAMGGGSIGHVGGRRGG RSCVRSGVDSGRGAFSIAIMELVMGAMENLIPKLGELLKEEYVMQSGVREKIQSVSRE LESIHAALRKIGKVPWEHLDDELRLWAHDLREASYDMEDIIDSFLVRVDGHEASEVHW FKWFLEKMTNQFNKIKASHEIGVAMKEIDEKLQEVATRHARYTIDNIAINPAGPATVD PRLLSMYKTLAELVGIEGPMDELMKMLDIDLPTKKRKIEIDVSVRKPKMVSIFGFGGL GKTTLAKAVYDKLKPSFDSGAFIPVGQNPNIRKVFRDILMDLDKQSYNDLNLKLLDER QLINKLQEFLQKKRCFVVIDDIWDKDSWRLIRCALQDSNHESRVVTTTRIYEVATQVG EVYKMHPLSHDESKKLLYTRIISGEGESLRSTSVEACDKILKKCGGVPLAIIIIASLL ANKPREYWSEVYNSIGLEHGYNDDVDNTRRILSLSYYDLPLHLKPCLLYLSIFPEDYY IEKNLLIWKWIAEGFVHEKQAAKLGLFETGEGYFNELINRSMIQPVEHEYSGYMCGCR VHDMVLDLILLLSGEENFVTVVDGSKEHELSWKNARRLALQHWSFEENRNQLANMGVK QTRSLIMTECFDKNMQLPSFQVLRVLEIQKQGRWWNIDGKINLQHVRNLLHLRFLHLD CIDSIPLIEQFRNLRFLQVLHLKESNIQELPESVGLLTKLLSLRVDIDVRVSPGVIEK LTSLQELYLWPYSDDTFQFVKVLGKLRELRVLHAKNLKLDGQGETSALLESLCNLHKI QTLDIDLNLNPNEGVTWDAGFTSPQCLRYLCLVSLRFHRMPEWINWSLLPNLSYLELR VNFLEELDLETLGRLPKLRYLHLFIHCDRIVSIGKIAGAGDACFQELRFLNTPYLYVR FDQHGIMCSKDEKAVMPNVKTLSFCVYVRILKDTDILGFDKLFSFAHLGRSSLQQVQV NIQCRGARAMEVEEAEAALAHAAAIHPNRPTLQIHKFSEGEMLPPHEEPSSFFPKVVV ENLNAHERKDDDLRFVLGQMLQRNPCVKKFSVSINCENACLEEVEKAEAAARYAVDFH ANRPTLELVKYGEDKMVLSGQHQQVCTPGCLSDSNP</aaseq>

Gene Sequence

<dnaseqindica>8220..8534#5623..7639#4472..5350#3630..3906#3482..3536#1435..1655#778..904#1..6#atggaggtaataacgaagtagagaatattagaaggatagtcttttagctactatgatctgacttcacatctgaaggctttcctattatatctcttggtgtaaatatgtaatgtatacgagggtctacttgtaaaatgtttttttttaagaatagaaggatgatgaaggggtgtgtaggcttgaagccccctgagaaattgccccaaaaccaaactacaatatggtattagagccaaaccctagctcaccggcgatctgtggggcggggtgaggcccagagcaggaggagggcgcgaggaaggcggctgggcctagagcagcggcatcgtacgcgtgaggcggcagcagcggcgcgtgtgcatgggccgcgctgggcccggagcaggtggttggcggcggcataggcgttgggcccagagtggcagcgtcatacgcgagcagaaggccaggcacgcgtgcgtgaggcagcggtgtccacagcgcgcgtgcgtgcaggaagaagaggagaggaagaaggagggaaaaagagggagaagggtgagaagaagaagaaggaagagaacagcaagaagaggagaaggaggaaggagtactatcaccggtagatttgggattttgtgtggttgatttaagaagaggaggaggaggaggaaggagtactatcaccggtaaatttgggattttgctgttgtgtgtggttgctgctagtagattgggatcttgttgttgtgtatggttgctgcttgctgctagtaaatttggtgctgcttgctgaagagaggagagaaggagaagaaagaaatgtcttcagtggttggaaaggaggttgtagatgcttcctcacttatcactaagggtgatatgaaggatttgctagaggatttgttgaagatgggcatgataggtcagaggaatgtagcaggagggtctaaactgaaactagaagtgatgccaagtgagttgaggttggaagggagcaaaaattatttgagttggtgtaggagagctcaactaatgttgagagcaaaaggggtggatcattttttgcaagagggttgtgaagagccctctgataaggagagccaagcatggaggacatggaatacaacaaatttaacagttatgctagtgagttgcagcagttatggacaaatcttgatcactgtgatcctctacagttgaagcatgaggaggacattgtgattggaaataaatggatgcagaggcgaagagtcattcatttcttgaaggggctgaacaaggagtttgaggatagaagagcggctatgttccaccaggctacattgcctactatggaagaggttatttttgctatggtgcaggagatgaggttgaaactgatgagaggcacaaatcttacaagatcagcatacactgtggctgataatagggaatgctacaactgtggacaagtgggtcatgtgagctacaattgtcccactcctcggaacattggcggcagggggttaattcgaggagggcatggtggatttggtggaacccgtggtggatttggaggagaccgtggtggctttgggggaaaccgcggtggtagaggaggtgactggagaggtcgcggtggaggtcgtggtaggacagaggttctcctcaggccaatgcagccattgaggagggtaaagctattaccctaacaggtgaacagctgacacagtgggaagaatggcagaagaacaagaccaatgagagctccaacaccaccactcactttagtaactttgccaactacgcctaagtggatgaaggtactcaggcacatgcactaattgcatctacatatagacatcctatagattggatcatagactcaggagcatcaaagcatttcataggattgcataatactttcacatcatacaccccttatatccgctatgaaactatctaaatcgttgatggtacatccaaacctatttatggtatagggtcggtagagtgcacatcatcaatgaacttatcttatgttcttcatgttccttcctttccagttaaccttctctcggtttgttcggctattgatcaactcaagtgcattgttgtatttgatgagaattcttgtctgttctaggagaagggactgggaggaggattgggactggagtcaggcgtgatgggttgtggtacatcaatcatgaggaactggtactagctgcggtggttggagatgtttagaaggagatcggtttgcttcattgttagttaggacatccatctttggggttttgagtaagttgtatccagacctctttagtagagtggatatgcatagactggtgtgtgatacttgtgagcttggtaaacatactcgctctacatatgttgggcttggccttcatagctatgaaccattcatattaatacattctgatgtttggggaccataccctgttacttctgtgagtggtttcaagtggtttgtcatctttattgattgtcatactcgtatgacttggatttatatgcttaagcataagaatgaggtccttcgatgcttccaggactttcataaattagtgacaacccaattttcttagaattattaaatatagaactattttcttaaagaaaaaagtccactcaaactaactattcaaactaactatttcattggatcgaacaccttaaattaatttttttcttattttacccttatatatactattgaaaatggttaactcagctccctcatgcctaacatttttgttttctataggctatatatttaggctgcaattttgtagacccacagatgacaccgttatcaatgttagaaaatattttctaactttttattatgattttttgcatgaaattttaaaactcgatatttaaatctatcttgagtgcttccaacctaaacacattaacccctcttaatataataaatctggacatatttgttatactaggataggttggcatttttgggacggagtaagtaagttgttaacatgtatcatcgacatacctaatttcaatgcaaaataccgcttatatagggagtgaaaaaagagaaatactattaaagggtaaagtgatccctttttttagtagtttgagagtgcaggatgagcttaaaaaaaattactttagagggttaactggtgtgacaaaatagttcgagtgggtaaaatggactatcttctaatatccaaaataaactaaactaaaatttagacttaaaaaatagaaactaaaatttagaatagtattatcgtcaaggcagcacaatggtagtactgccatatatatagactcttttacaaacatcggatgtttcctttacaggtcggtattattttattcaactagctagtgcgatctgaagactgaacagcccggccgcccttctttgtttcttattctcaacttgctttatataatatcttgaacgtaaattccaggaaattggtgcatatacactattaatttctgtttgcaggtagtggtgatggtaaatctatcatcatttttactattaccacctaataactactgtacgtgaccaataaacagttagataagatttatcttatttccagccaattttttatttatagtaattaattatttggaaattaaataaccagtaaattatccgcattggctccacctctctcctcccctctccgcgtgggacggtgtccgtggcgtcgcggcatcggccacgggcgggacaactgttcctgtgattaatccggccgtttccgcggcggatccagcatcagtggtgggcgagaaactgaaggcggccgttcttgcagcgaacccagtgttggcggcatcggcaatgggcgggggtagtatcggtcatgttggcggcaggcgaggcggtcgttcttgtgtcagatccggtgtcgacagtgggtggggcggcctatttaatgctatagatactattctaattattgggttaggaatggccttagtcgtcctctgctgctcaaccttctcttcagtcttttttatcgctgccctctgctgctcgctgctaccaagcgcacagctagctgctctcggacgaggcaacgacgactccttcccttcccttaaccattaagctactctaaaatcccaagcttcggatcgaatcgagctacgaatcgcgtcccagggcaaagaaaggtaggcctttttcagttaaaatttcaaaagatttcttgatggaagttttggatctgtgttgtaatcatcaaccggcacttctgggctggcaaacttaaagttttattactcagtggggaggtgcaggggtgaactaagaaactagagataaaactttcaactttttatatgtttgtcgttttgataaaatcgatgttgtttctgcgtgagttggaagtttgatgagaaaaattggagctaaaagttaaaaaagaaagaaattctgcttgaaaactcattatttatgtggtttgtgatgatgatgaaggagaggagctttctcgatcgcaatcatggagctggtgatgggggcaatggaaaacctgatccccaagttgggtgagctgctcaaggaagagtacgtcatgcagtcgggcgtgagagagaagatccagtctgtctcacgggagctcgagagcatccacgctgctctccgcaagatcggcaaggtgccatgggagcatcttgacgatgagttgaggctttgggcgcacgaccttagggaggcgtcgtatgacatggaggacatcatcgactccttccttgtgcgcgtcgacggccatgaggcaagtgaagttcactggttcaaatggttcttggagaagatgaccaaccagttcaacaagatcaaggctagccatgaaatcggtgtcgcaatgaaagaaatcgatgagaagctccaggaggtggctaccaggcatgcgaggtacacaatcgacaatattgccatcaatcctgcaggcccagcaactgtcgatcctcgtctcttgagtatgtacaaaacattggcagagcttgttggaattgaggggcccatggatgagctcatgaagatgttggatattgatttgccgaccaagaagaggaagatcgaaatcgatgtgtccgttagaaaaccgaagatggtatccatctttgggtttggaggacttggcaagaccactcttgccaaagcagtctacgacaagcttaaaccaagttttgattctggggctttcattccggtcggtcagaatcctaatattaggaaagtttttagggatattctcatggatcttgacaagcagtcatacaatgacttaaatctaaagctgctggacgaaaggcaactcatcaacaaactccaggaattcctccaaaaaaagaggtaggaatataatcaccaaacctttggcgcctattggtagagaatgcaataacaattaactttctccaaattattgcatgctacagtttgatgcagattcatgtcgttcctccttactacttctgtttatatatataacaaaatctcatgctactgtaatatggttgatggttttctgcggttgttgtgttctgcttgcttttacatgttcttccactagttttaattactaactctattccctttcattgttgtgtggatatatgtaccaggtgttttgtagtcattgatgacatatgggataaggattcatggaggttaattagatgtgcactacaagacagtaaccatgaaagcagagtagtcacaactactcgtatttatgaagttgccacacaagtgggcgaagtttacaaaatgcatccactttctcatgatgaatcaaaaaaattattgtacacaagaattattagcggtgaaggtgagtctctccgtagtacatcggttgaggcatgtgacaaaatactaaagaaatgtggcggtgtgcctttagctatcatcataatagctagtctgttggccaataaaccaagggaatactggtccgaagtgtataactctattggtttagaacatggatacaatgatgacgtagataatacaagaaggatattgtctttgagctactatgatttgccgttgcatctgaagccgtgcttattgtacctaagcatatttccggaagattattatattgagaaaaatttgttaatatggaagtggatagcagagggttttgtacatgagaaacaagcagcaaagttagggttatttgaaaccggggagggatatttcaatgagttgataaacagaagcatgatccagccagttgagcatgaatactcagggtacatgtgtggttgccgtgttcatgacatggtacttgatctgatcctcttattgtcaggtgaagaaaactttgtcactgtagtagatggcagtaaggaacatgaactttcatggaaaaatgcccgtagattagctctacaacattggagttttgaagagaacaggaatcagttggctaatatgggtgtgaagcaaacaaggtcccttattatgactgagtgctttgataagaacatgcaattaccgagcttccaagttttacgtgtactagaaatacaaaagcaaggccgttggtggaacattgatggtaaaattaacctgcagcatgttagaaatttacttcaccttaggttcctccatctagattgtattgattctattcctctcatagagcaattcagaaatttgaggtttctacaagtacttcatctgaaggaatctaacatacaagagctgccagagtcagtgggcctgctaacaaaattgctgtccctacgtgttgatattgatgtaagggtgtcgcctggtgtgatcgagaagctgacgtccttacaggagctgtatttgtggccttatagtgatgatacgttccagttcgtgaaggtcctaggcaagctgagggaactgagggtgctgcatgctaaaaaccttaagcttgatggacagggcgagacatcagcactgctggagtccctatgcaatctgcacaagatccaaactttggacattgacctaaatcttaatccaaatgagggtgtcacgtgggatgcaggattcacttcccctcaatgcctccgatacctctgcttggtgtctttgaggtttcatagaatgccagagtggattaattggtcgcttcttccaaacctctcttatcttgaattgagagtgaattttttggaagagctagaccttgaaacccttgggaggttaccaaaactacgatacctccatctgtttatacactgcgacaggatagtaagcatcgggaagattgccggtgctggtgatgcctgcttccaagagttgagatttttgaacacaccctacttgtatgtccggtttgatcagcatggcatcatgtgcagcaaagacgaaaaagctgtcatgccaaacgtcaaaactctcagtttttgtgtttatgtgcggatcctaaaagataccgacatacttggatttgacaagctgtttagcttcgctcatcttggaagaagttcgctccaacaagtccaagttaacatccaatgtcgtggtgctcgtgccatggaagtcgaggaagcggaggcggcgttggcacacgcagccgccatccatcccaaccgtccaacccttcaaatccataagttttcggagggagaaatgcttccccctcacgaggaggtacgctcacacaaatgggcctcatcttttcgtttatgtttatacttatcagctaaaatttaaatttttaagtttaaaattagagcttatttcgaggttttttcattgaaatttattttaattagcctctgtttttagatcgctaagaacacttatataaacgttttatgcacatattatttttcctttgcaaatatagcgtttgacttattccacgaataagcgaaatgatgggctgattaatcaatcggactttttccgatggtctctattggtactgttatactacgcactactattattatcaacagtacaagacgtctcaactgttggtttatgacttctagtactggtagaaaaagagtattcgactagtacttggtgtggcagtataaataaataccggtttaaattcgtttataccgttagtaaaagaacattatatttataaaacacttcttggaactttcagtgaccgctggctcccatttttggtgattgagctgtgtatcatctattcttctctatattaattagttttcttcttctttcttgatggccacttgcttctccttcccagcctagcagcttctttcctaaagttgttgtcgaaaatctcaatgcgcatgagagaaaggacgacgatcttcgttttgtcctcggacagatgctccagcgtaatccatgcgtaaagaaattcagtgtctccatcaactgtgaaaatgcatgtcttgaggaggtggagaaagcagaggcggctgcgagatatgcagtcgacttccacgcaaaccgcccgacacttgaactggtaaaatatggtgaagataagatggtgttgtctggccaacaccaacaggtatgcaccccaggttgcctatctgattctaatccctag</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0170700, RefSeq:Os08g0170700