Os08g0171800

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Revision as of 12:48, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0171800| Description = Protein of unknown function DUF617, plant family protein| Version = NM_001067634.1 GI:115475004 GeneID:4344776| Leng...")
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Gene Name

Os08g0171800

Description

Protein of unknown function DUF617, plant family protein

Version

NM_001067634.1 GI:115475004 GeneID:4344776

Length

1472 bp

Definition

Oryza sativa Japonica Group Os08g0171800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:4210446..4211917

Sequence Coding Region

4210909..4211856

Expression

GEO Profiles:Os08g0171800

Genome Context

<gbrowseImage1> name=NC_008401:4210446..4211917 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:4210446..4211917 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcggcttcgctccccaccccgtcgtcgtccccaccgccgccatggacgggaccagcagcgttagcgcgcggacggcctcgtctctgtcgtcgtcgtcgtcgtcgctcgacgacggcggccgtggccggcctccgccggccgggtcgacgctggagctgccgtcgcggaagcactaccggtacccttcccggtcggcgaggctgttccagaagctgcgccgctcgctcccgctgctgacgctggcgccgcggtgcggccggatgcaggtcggctcggcgagcgaggtcgccgcggcggcggcgtccggcggaggaggaggaggagcagccgactcgcacctgatgtcgcacgtcgtgtcgtcgttctccggcgcggcgcggccgatgcggcgggtgacggggacgctgttcggccaccgcaagggccgcgtcgcgctggcgctgcaggagacgccgcgctgcctgcccaccctcgtcatcgagctcgcgatccagacgaacgcgctgctccgggagctcgccaaccccgccggcgcgcgcatcgtcctggagaccgagcgccgcgcgccatccacggacgccgccgccggcaagcaccggagggcgccgccgctgctggacgtggcggcgtggaccatgttctgcaacgggaggaagaccgggctcgcggtgcggcgggaggcgacggacgacgacctcgcggtgctggagacgctgcgccccgtctccatgggcgccggcgtgctccccgcctccaacaggtcgtcgtcgtcgtcgtctcagtcgccggagaagggggcggcggcggcggacgacgaggtggcctacatgcgcggctgcttcgaccacttcgtcggctcgcgcgactccgagtcgctctacatgatcgcgccccagggcggcggcaccggcccggagctcgccatcttcttcgtcaggctatga</cdnaseq>

Protein Sequence

<aaseq>MGGFAPHPVVVPTAAMDGTSSVSARTASSLSSSSSSLDDGGRGR PPPAGSTLELPSRKHYRYPSRSARLFQKLRRSLPLLTLAPRCGRMQVGSASEVAAAAA SGGGGGGAADSHLMSHVVSSFSGAARPMRRVTGTLFGHRKGRVALALQETPRCLPTLV IELAIQTNALLRELANPAGARIVLETERRAPSTDAAAGKHRRAPPLLDVAAWTMFCNG RKTGLAVRREATDDDLAVLETLRPVSMGAGVLPASNRSSSSSSQSPEKGAAAADDEVA YMRGCFDHFVGSRDSESLYMIAPQGGGTGPELAIFFVRL</aaseq>

Gene Sequence

<dnaseqindica>62..1009#attcccccaaggcgccgcaacgttccccgacgccggccggccgcccacggccctcgcgcgcatgggcggcttcgctccccaccccgtcgtcgtccccaccgccgccatggacgggaccagcagcgttagcgcgcggacggcctcgtctctgtcgtcgtcgtcgtcgtcgctcgacgacggcggccgtggccggcctccgccggccgggtcgacgctggagctgccgtcgcggaagcactaccggtacccttcccggtcggcgaggctgttccagaagctgcgccgctcgctcccgctgctgacgctggcgccgcggtgcggccggatgcaggtcggctcggcgagcgaggtcgccgcggcggcggcgtccggcggaggaggaggaggagcagccgactcgcacctgatgtcgcacgtcgtgtcgtcgttctccggcgcggcgcggccgatgcggcgggtgacggggacgctgttcggccaccgcaagggccgcgtcgcgctggcgctgcaggagacgccgcgctgcctgcccaccctcgtcatcgagctcgcgatccagacgaacgcgctgctccgggagctcgccaaccccgccggcgcgcgcatcgtcctggagaccgagcgccgcgcgccatccacggacgccgccgccggcaagcaccggagggcgccgccgctgctggacgtggcggcgtggaccatgttctgcaacgggaggaagaccgggctcgcggtgcggcgggaggcgacggacgacgacctcgcggtgctggagacgctgcgccccgtctccatgggcgccggcgtgctccccgcctccaacaggtcgtcgtcgtcgtcgtctcagtcgccggagaagggggcggcggcggcggacgacgaggtggcctacatgcgcggctgcttcgaccacttcgtcggctcgcgcgactccgagtcgctctacatgatcgcgccccagggcggcggcaccggcccggagctcgccatcttcttcgtcaggctatgaccaccaccaccacctactcgccggctcgccggcgatgcaccgatcaatccatcgccaccgccatcgcgcgcgccatgcaaagcaagacgaagggcgcgtcgtgattcgtgcagccctcttgacggcctcgagattcgtgaggagcaggcgagccacctcgactccctacgtcagagatggcttagcttaaatttaatcatctgattaagcactaatcttgtgctcttagtgggtgattaggttgtgaggaggtcattgcataaatcgggtttaatggtggtgcccaacacctcattgcacacacaatctagtggagtacggagaaaattatattaattaattaagttgcttgcttttgctttcttctctctcgcgtttaattatcggatggtaattttgcataatttatttgtcagtgcaaagaatttgagaattacatataaactccattttggtttagatt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0171800, RefSeq:Os08g0171800