Os08g0174800

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Revision as of 12:49, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0174800| Description = Similar to Somatic embryogenesis receptor-like kinase| Version = NM_001067644.1 GI:115475024 GeneID:4344786| Length ...")
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Gene Name

Os08g0174800

Description

Similar to Somatic embryogenesis receptor-like kinase

Version

NM_001067644.1 GI:115475024 GeneID:4344786

Length

8551 bp

Definition

Oryza sativa Japonica Group Os08g0174800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:4351818..4360368

Sequence Coding Region

4359131..4359143,4359279..4359673,4359944..4360210

Expression

GEO Profiles:Os08g0174800

Genome Context

<gbrowseImage1> name=NC_008401:4351818..4360368 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:4351818..4360368 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cgccaacaaaaagaacggccgccatatgaacctccacttgattggcgaacaaggaggaggattgcattgggttccgccaggggactgtcctatttacatgatcattgtgacccaaagattatccatcgtgatgtcaaagctgcaaatatttcattagatgaagactttgaagccttagtggggggttttggtttggccaaactaatggatcacatggataccgatgaaccaaatgcagtacgtggaacaattgggcatatcgcaccagaatatctttcaactggaattatctctgagaaaactgatgtatttggttatgggattatgcttttggagcttattacaggacaacgtgcctttgaccttgctcgtctagccaatgatgatgacgtcatgctactggactgggtaaaaggattactcaaggagaaacggctggagatgttggttgatccagatctacagagcaactacattgatgttgaggtagaatcactaatccaggttgctcttctttgcacacaaggctcccccacagaacgccctaagatggcggaggtggtgaggatgcttgaaggtgatggccttgccgagagatgggaggagtggcagaagatagaagtagtacggcaggaggtagagcttgttgggaatagtcacacattgtttatttag</cdnaseq>

Protein Sequence

<aaseq>RQQKERPPYEPPLDWRTRRRIALGSARGLSYLHDHCDPKIIHRD VKAANISLDEDFEALVGGFGLAKLMDHMDTDEPNAVRGTIGHIAPEYLSTGIISEKTD VFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKRLEMLVDPDLQSNYID VEVESLIQVALLCTQGSPTERPKMAEVVRMLEGDGLAERWEEWQKIEVVRQEVELVGN SHTLFI</aaseq>

Gene Sequence

<dnaseqindica>7314..7326#7462..7856#8127..8393#agatcctgaacaattacaagtagcttcctactattacgactagtaccatcaaactacttcatccgactgagagctgagctcagacataagagagtaatggcgacgatgcttgtgggtgtttctacaggagtaatgaacaccctcctgtccaagctctccaagattttggaggacaaatacacaaagctcaaaggagtacgccgtcaaatcgcattctttagaaatgagttgagcagcatgaaggctgccttggagatgcttgaaactgtagaggaacttgatcccctccagaaggaatggagggacacagtgcgtgagctggcttatgatatcgaggactgtattgatcccttcttggttcttgttgatcagaagcaagatgaacaatcaacattctttaaggggttctcctacaaactgaagaagatgaaggctcgccatgagatctctaatgagattgaagaactgaagacacgcgtgatagaggcaagcaagaggcacaagagatataattttgttggtctacaatccagccatggcacttctggtattgaccctaggctgcgagcactctacgttgaggttgatgagcttgtgggaatcaaaggaccaaaggagcatgtcatggagtggtttgccaaggggagaggtgatgtagaagtgaaggtgttgtccgttgtgggttctggaggtctgggtaagactactcttgccaaccaaatcttccgtcaattgaagtgccaatttgaatgcacaggttttgtatctgtgtcacgaagtcctgacataaagagtatttaaagacaaatgcatactgaggtagggatcactgatgacacatctgaagatgagcgacaactgatagacaaaataagggaccacctcaaagataaaaggtaaacccagtaatccacttataacaactaatgattttctgcattttgttaagcacagaaaccaaacatggaagcatacaataaacaataattagtggcataactacatgcattttctttgtttataaagtgcatactgcatatacatatgctaaaaacaagaagtctagtcttgactgctataactgtcatgagtaaattgcataaactttctaaaccatttttgtataacaacattaatgaaaaactaacttcttgatggcaaatgacaaagacgtgtgtaaatttgtactgcttgactttttttcaacaaaatccaaatttacaaataggatttcttttctcagagtgcaaaattgtactgcttgatggcaaatggcaacacatatgtgagcatttggaaaggaaggtatttttctccattcctactagaacaaaactaccacctgtggaatatctgcattccaaacaattttttttctcaaaagcgcaggactgcatttcatttcatcaagaagaaaggaaataaatacaaaaagagggggctaaactaacaccagcctacactaacaacacctaagggcaacacacaacctcaacaagcaaacacaaactaattgcccggggtaagcaaacctacagtgaaactcatggagtgcgtaagctccagcaaaactacactcatttattttatagcctgcaaactcccgcgcccccccccccccaaaaaaaaaaaacgtttggattagcactattgaaaacacaatcgttgcgatgcttccaaatctcccaagcaactaggatgatcaacgagttcaatcagttgtgcaactctagataccccttgatggctttgccccaccatgctgagaatcaagtttatgatggttgaggtgcagcaccagccagccgtagcctcaagaggagtggggcaagagaaaacacatgatacgaggatatgctgaaatagtcatcaccactttggtcgcttattgggcaggcaacaaaatgtgacaaccctcgcttagcaagtcgatcagaagtcaacatatgacgttgattgctaaccaaataaaaaacttgcaacataaaggagctcagcttttccaaatccgcttccatggagcaaacttgatagatcccaggaaataagacttgtaggctgatttacttgtgtgggaaccagaccctgtgagcttccaaatatgctggtcctgaactccatgctgcaagaccaccccatcaaccaaatcccagatcagcaaatacttagagagaacatggacagacaagccaccttttataccagccacccaccgcctatttactagtgcttgtgccacagtacgttgcttcgttgatcttttggtgattaaataaaaaagattgggaaagggcatgtagcctagtggttgcagtaatctgagtagcactccaaggtcctaagttcaaatctctataggagcgaatttcggattgggttatttgagggctaagttccctgtttgataggctaagttcataatttaaaaaggctgcatatatccagttggatgtagagatcgggtaaaaaaatacccttctctaaaaaaaaaagattgggagcctattcagttatcgttcttccttgccaccatctatcactccagtacatggtattttccccgttgccaactatagtttccacacccactctgaacacagagcgaacactgcgatgtacttgtataggtaacacgttacaaggcctagtggagtcagtttttttaagtctaagccacctcaagattatgaatgccaagccccccttaaagagaggccaacaaacacgatcccaggagacaaggcagttatcactattggccttctcctgacccttccaaaggaagcccttgcgccttttatcaatagccctggacacccatttgggaagattcattgccatgaccgaatagataagtatagctgtcaagaccacacagaccatcacaagccggccagcctggttcataagggaagctttccacactggtaggccatccgccactttgtcaaccaatggcaacaaatcatccttaatggtttgcgagttgtgacggaagggcaagataagagcaaggaaagctcttcacttcacaagaaagctcagtggagagaacttccaagtcttcctcggaacattggataggggtgcacaaactccttgtcattttggtcttaagacctgaaatacagccaaaaaaatctaggatcacccttgtaggtcagaggaacatcattgttatgtggagggatgaattggggtgctcgacgggagggcaaggttgctgcagcttcgctgccccggagcctaggtgaggccgaacagagaagaggggagactagagataggtttaacttctttcttgattaattccacatgactgtggtgcctctccttatatagagccggctcctaacaaacatcctaacaaccttatcaaataaagcctaacaaacctcctaacaaccttatctaataaagcctaataaccttatctaataatgagaggggctgagttctgcccataacaatcaccacattatctgtgcgtatagagaaatccgatgtgccatctttggaacagcatggggccgacgaagattattgtggatgcatgaaccacgataaattcagcaaattcataactaaaaaaaaacatggggatggaggctccgaagatgaagtgttatttgccccggttccctattaatcaaagctcctgtggaagaagtggagagcggtaggcatagcaagttacaataccaccttccaaaccccaagtattttagtacctcaattaggaaggaccaatcaagcgaatcaaaggcctttgatatgtcaagtttaaacaaaacatggggctctttcttactgtgtaattttcttgccacctgttggacaagcagacaattgtcctgtatacttcttcccttgatgaatgcactttgatttatggaaaccatccccggaagcaaaggtgctaggcgatgtgccaaccaacttagcaaaatttgaataagactaatggaacgataatactttacttgaatcgcatcaattttttttttggcaacaaggcaatgaaagctgttttaagaagtttgaacttagccacatgaccacactgaattgctgagaaggccaaagatcacatcattttttgataatgtcccaagtcccaacacgatgtagaaccgaaagttccaacttccgaacaattgaatgtccacaataaatccatgcattaagatacattgccacatactcccctcaataagtgtatttttagcctaacaatttgtccctaatagagtgtagttttatagtggtccactagacctctttaatactacatccttttcttctcattttagtcattgaacaaatagtactccctcctcctcgttttctccccctccttgttttctctccattttaatgaagggcatattagtcttttgacctcgtccttaatatgtctttgactagctaaaactacagttatttagggacggagggttttatgtgtgcaaaatctgaccatatatatgctttgagaagacatatccatttccctaactaggttcctcattgatatttataaaactgggacctgagctctagagtaagcatgcatactagtatataaccctgattgcagtagggtggtaagcatacttgaatgatatataactaaataaccctgttaaaatcatggaacaggtactttgttgtaattgatgatgtatgggatgttgaagcatgggaagctgtgaaacttgccttgttcaataatagatgtggtagcagaatcgtcatgacaacacgtaatgcagcagttgcatcgcattgctcacgtggtggtgtttgtgtctatcaaatggaaccccttagttttgctgactccaaaatgttgttttgccaaagagcatttcgttcccaggaattatactatccccatttggaagaagtttgtgatgagatactggcaaagtgtggtggattaccattggcaattattactgtatctagcttgttagccggcaagcatgcaaaagatgaatgggacaggatgctaactgctattggccatgcacttgctaagaatcctgatgctgctaacatgacaaagatattatctctcagttactttgatcttccccaccatctaagaacttgtttcttatatttgagtgtatttccagaagattacaagatcagcaagcaacacttgataaatagatggattgccgaaggatttgttcatgaagaacaaggatggaggacctatgaagttggcgggaactattttaatgatctcatcaatagaagtttgatcgaaccagttgatataaatgatggccaggcgaaggcatgtcaagttcatgacatcattcttgatttcatcacatgcaaggctgccgaggaaaatttcgtcacctcagtgaattctgtggagcatgggaacatttcagaatgcagagttcataggctctgtgtcaagaatcacaataatgaaaaggttagcaaaccaacaagcctgaatgtcactcatgtccggtcacttaccatgtttgggcatgtcgatggaatttccttgtttgctttcccaattttgcgtgtgttggacttatcatattcactgttaaaagacaaacatcttaaaaatattgaaaagttgcattttctcaagtatttatctctccggtcaacattaataactaagctcccaagaaagattggacaactgaactgtctagaaacactggacatatcttatactgaaattctagaactgccgctaagtattgcaaaacttgagtgcctggccaatctatatgttggaagagggactagatttccggacagattaattggtaagatgcatagcctggtagaactagaggaatttggcgtgtcatgtgaactaggcaagtctctgcaaggattcagtcagctatcaaagcttaggacgttgaaagttcatcttttttggtggtcagatgctgaggagtgtcaaaattacgtgtcagctttgctatctagcaaccttcatcatctatatttgaccggtggcccactgatcatggagaagtggtaccctcctagtccttgcatcatccggaagcttcatatcataggctgttacatccgtaaggtcccaaactggatgagctcgcttggaagcctcactgaattacaactctggatccatagaatgggaccgaatgatattgagatccttggcgcaatacccagcttgtgttttctcaaacttaaaactatgtgtggcatcaatggaaggatcatcatatgtagcaacaaaggattcagaagtctgacatatttctcattacgaatcaagagatgtgggaccttgctagagtttgaaccagaatcaatgccaaagcttgataacttccaagtggaattccgtttacatggaatggattgcctgaatggtgcttctgatttcggcatccagcacctctccgcccttaccaaagtcaagatcggtatttggggcaacatttgctctgatggtatttatgatccagaacaagatatgaacaatagcatcaccaggtctgttgttagcctaatcaaagctgccatcgagaagcttcccaatcatccaactagcagattccatttagagtatgatcatggaagttgtttattggtaagttcttgaccagacctggagacattgattgttaattcatcgtcttagtttcaaatcctattattgttattattactatttgtttcttggatgctgcaaaagtgcaatatcttatcgtttaattggacaattaattcgctcctggcttgtcgctctctttcttgagctgtggctctgtgcctgtttccttccaacatttgcaggacgtacctcacctgatgcttttaataagtaaaaaatgtgagattggatcatacaaagcaatcagtagctgccaagaagggattactggaagcgaagttccgctatctgttttctcaataataatcatcctcacattcatttttctttttgtgccatgtgtaacagggtgagacaagtcaagagtttgagggtcagggtccagatgaggcctatcctcgccagcataaaattttttcactacgggaactagaagatgcaacaaattgctttagcgatagcaatgttcttcaacgtggtcgattcgacggcagcatgtacaaaggaagactaggagatggctcattagtagctgttaaaaaggattatataagccgggctttaagcatgggttatccaaacattgattggagaacatggcactttcaaacacaagttgagatgcctgtgcatagaaacctgatgcgtcttcatggattctgcataacgccaacaaaaaggttccttgtctatccatacatgtctaatggaaccgttgcatcacgtcttagagttacgttgccttttttttttctagtctgacatccctgtatctttcagataattagagggttgatttgggttttatattatagaacggccgccatatgaacctccacttgattggcgaacaaggaggaggattgcattgggttccgccaggggactgtcctatttacatgatcattgtgacccaaagattatccatcgtgatgtcaaagctgcaaatatttcattagatgaagactttgaagccttagtggggggttttggtttggccaaactaatggatcacatggataccgatgaaccaaatgcagtacgtggaacaattgggcatatcgcaccagaatatctttcaactggaattatctctgagaaaactgatgtatttggttatgggattatgcttttggagcttattacaggacaacgtgcctttgaccttgctcgtctagccaatgatgatgacgtcatgctactggactgggtaattgactagcacaatcttcaattcgaattgcagtccatattcatgtccttttgtggcttgatgttgtgttgggagttagataaaattacttttatgtatgtccaaaattgtatcatataaaaaatagtagttacagtaaggtcttaaaagtagtcctttttttaatcattatggcattagctaagctaagcataggattgaacatcatcgtctgagaaatacactgttatatggtaagccaatattcatgtgctgtgctttgtgcaggtaaaaggattactcaaggagaaacggctggagatgttggttgatccagatctacagagcaactacattgatgttgaggtagaatcactaatccaggttgctcttctttgcacacaaggctcccccacagaacgccctaagatggcggaggtggtgaggatgcttgaaggtgatggccttgccgagagatgggaggagtggcagaagatagaagtagtacggcaggaggtagagcttgttgggaatagtcacacattgtttatttagagagagttgaactaacttaaaagtggggggagtcactcacctcttgatgtagcttttggggtgtagcaaggctttctcccttttgggatgtagcaagactttcttccggttgagccaacgtctcctgattttgggccctcagagcttggccctcattg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0174800, RefSeq:Os08g0174800