Os08g0174900

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Revision as of 12:49, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0174900| Description = Similar to CRS2-associated factor 2| Version = NM_001067645.1 GI:115475026 GeneID:4344787| Length = 1714 bp| Defini...")
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Gene Name

Os08g0174900

Description

Similar to CRS2-associated factor 2

Version

NM_001067645.1 GI:115475026 GeneID:4344787

Length

1714 bp

Definition

Oryza sativa Japonica Group Os08g0174900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:4362402..4364115

Sequence Coding Region

4362402..4362942,4363046..4363173,4363335..4363560,4363637..4363764,4363852..4364115

Expression

GEO Profiles:Os08g0174900

Genome Context

<gbrowseImage1> name=NC_008401:4362402..4364115 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:4362402..4364115 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctcctcctcgccggcctcctccgccgcgcccgcccgccgcgccgcccctccgtccgccgcctctccggcctcctcgaccgctacggcttcgtgccacccgcctccctcaccccgcactccgcctccgacgacggcggcgccaagaagcggcgccccaagaagcccccctaccggccaccctcctcgctggaccgcggcggccgccccgccgcgcgctccgacctccccttcgacttccggttcagctacaccgagagctccccgggggacaagcccatcgggctccgcgagcccaagtactccccgtttggccccggccgcctcgaccgcccatggacgggcctctgcgcccccgccgtcgacaccacgctccgcgacgcccacgccgacgacccggcccccgccgccgagagggagctcgaggaggcgcgccgccgcgagcgggagcgcgtgctcggcgagccgctcacccccgccgagcgcgccttcttggttagcaagtgccagaagagccgcaccaagaagcagatcaatctcgggagagatgggctcactcacaacatgctaaatgacatacataatcactggaagaacgacgaggcggtcagggtgaaatgcctcggcgtgccgacggttgatatgcagaatgtgtgccatcagcttgaggataaaactggtggccttatcatccacaggcatggtggtcagttgatattgtacaggggacggcattataatccaaagaaaagacctgttattccgttaatgctgtggaagccagctgaacctgtatacccgaggctaattaaaacaacaatagaaggactgacagttgaggagacaaaggaaatgaggaagaaaggcctatatgttcctgttttgacgaagctagccaagaatgggtattacgctagtcttgttccaatggttcgggatgcctttttgactgatgagttggtccggatagattctaaaggattgccaaaaagtgattatcggaaaattggagtcaagctcagggaccttgttccttgcataattgtctcttttgacaaagagcagattattgtttggaggggaaaggattataatggaaccatacaggataatacacagaagacatctgtttcagttctcgaagaagagagtgcaggagctgagagcgagaacggtgatcaggaacaagcatcaagcgactgggcttctgatgagtgctctcagttgagtagctctgatgaaatgccagatgacaaatcagctatttctgaggcagactctgattag</cdnaseq>

Protein Sequence

<aaseq>MLLLAGLLRRARPPRRPSVRRLSGLLDRYGFVPPASLTPHSASD DGGAKKRRPKKPPYRPPSSLDRGGRPAARSDLPFDFRFSYTESSPGDKPIGLREPKYS PFGPGRLDRPWTGLCAPAVDTTLRDAHADDPAPAAERELEEARRRERERVLGEPLTPA ERAFLVSKCQKSRTKKQINLGRDGLTHNMLNDIHNHWKNDEAVRVKCLGVPTVDMQNV CHQLEDKTGGLIIHRHGGQLILYRGRHYNPKKRPVIPLMLWKPAEPVYPRLIKTTIEG LTVEETKEMRKKGLYVPVLTKLAKNGYYASLVPMVRDAFLTDELVRIDSKGLPKSDYR KIGVKLRDLVPCIIVSFDKEQIIVWRGKDYNGTIQDNTQKTSVSVLEEESAGAESENG DQEQASSDWASDECSQLSSSDEMPDDKSAISEADSD</aaseq>

Gene Sequence

<dnaseqindica>1..541#645..772#934..1159#1236..1363#1451..1714#atgctcctcctcgccggcctcctccgccgcgcccgcccgccgcgccgcccctccgtccgccgcctctccggcctcctcgaccgctacggcttcgtgccacccgcctccctcaccccgcactccgcctccgacgacggcggcgccaagaagcggcgccccaagaagcccccctaccggccaccctcctcgctggaccgcggcggccgccccgccgcgcgctccgacctccccttcgacttccggttcagctacaccgagagctccccgggggacaagcccatcgggctccgcgagcccaagtactccccgtttggccccggccgcctcgaccgcccatggacgggcctctgcgcccccgccgtcgacaccacgctccgcgacgcccacgccgacgacccggcccccgccgccgagagggagctcgaggaggcgcgccgccgcgagcgggagcgcgtgctcggcgagccgctcacccccgccgagcgcgccttcttggttagcaagtgccagaagagccgcaccaagaagcagatcaatctcggtaaaaaaaaaaagaagagtacttgtttttagttggtaaattttactccatttcaagatgtggtgatgatgattatgattcgattgggtggtgatttttgtagggagagatgggctcactcacaacatgctaaatgacatacataatcactggaagaacgacgaggcggtcagggtgaaatgcctcggcgtgccgacggttgatatgcagaatgtgtgccatcagcttgaggtagcttcatctgtgttgggtctaataaataagaatcatctttgcctgcatgtactaatgtgaatacactgatgccattttagtagcttttgtttgattttagcttattgttacatttctgtccattagaaagcatgatgagtagtgcccacttctttcaggataaaactggtggccttatcatccacaggcatggtggtcagttgatattgtacaggggacggcattataatccaaagaaaagacctgttattccgttaatgctgtggaagccagctgaacctgtatacccgaggctaattaaaacaacaatagaaggactgacagttgaggagacaaaggaaatgaggaagaaaggcctatatgttcctgttttgacgaagctaggtaaacgctgtaccgctttttcgcttacatatatgtagggttgaagagaggacttaacaactgcgctatttcacagccaagaatgggtattacgctagtcttgttccaatggttcgggatgcctttttgactgatgagttggtccggatagattctaaaggattgccaaaaagtgattatcggaaaattggagtcaagctcagggtgagtttattatgtgcatatattaatgcgtgtattttccttgacgatccgtaacagagcattttcttcccttctgttttgctgtaggaccttgttccttgcataattgtctcttttgacaaagagcagattattgtttggaggggaaaggattataatggaaccatacaggataatacacagaagacatctgtttcagttctcgaagaagagagtgcaggagctgagagcgagaacggtgatcaggaacaagcatcaagcgactgggcttctgatgagtgctctcagttgagtagctctgatgaaatgccagatgacaaatcagctatttctgaggcagactctgattag</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0174900, RefSeq:Os08g0174900