Os08g0176100

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Revision as of 12:49, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0176100| Description = Cornichon family protein| Version = NM_001067651.1 GI:115475038 GeneID:4344795| Length = 3286 bp| Definition = Oryz...")
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Gene Name

Os08g0176100

Description

Cornichon family protein

Version

NM_001067651.1 GI:115475038 GeneID:4344795

Length

3286 bp

Definition

Oryza sativa Japonica Group Os08g0176100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:4429921..4433206

Sequence Coding Region

4429954..4430078,4430191..4430319,4430414..4430458,4430722..4430807,4430972..4431024
,4431138..4431197,4431856..4431957,4432378..4432497,4432679..4432930

Expression

GEO Profiles:Os08g0176100

Genome Context

<gbrowseImage1> name=NC_008401:4429921..4433206 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:4429921..4433206 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgcggatcccaccaccggcggcggcgaggcggagtccttcttccgcgccgcgccgccgctccgcgaccaggaccgcgtcgccggggacctcgccgacttcgtcgcccgccactccggcaacggaggaggggggaggctcgccggggtggtctgcgtcacctccggcggcacgacggtgcccctggagcagcggtgcgtgcgctacatcgacaacttcagctccggccagcgaggggccgcgtccaccgagtactttctcaaagctggctacgcggtcatcttcatctaccgccgtgggagcaagcaaccttactgtaggtttcttccagaggattcctttcttgatttattcgagcttggtgaagaatcagatatccaagtcccagaatctcatgccgcggttgtcaagacagcaataagaaattatcggaaggcgattgatgaaggcctattgctgaaacttcctttcaccactatctttgagtaccttcagttactgcaaatggtaggtacggcgatgaattgcttgggacgccaaggaatgttttaccttgctgcggcagtttctgacttttatgttccatgggaaagcatggctaaacataaaatcgagtcagcaagtggtcctttgaacatgcaactcaatcaagttccgaagatgcttttcattctgagaaaacaatgggctccttcagcattttgtgtatccttcaagcttgagacggacccagatatccttctgcagaaggcagaggcagctctgagaaagtatggtatgaatgtcgtggtcgccaacgagctagcgaactacaaagatgtagttgtgatggtcacaagcaatgggaggacaaccgtgcgaaggcccagcaaggaggacgacgtcgaagaacagttaatcgatctcttggtagagatgcactccgaacacatcatgcagctcaatcaagacgtgcacaagctgacataa</cdnaseq>

Protein Sequence

<aaseq>MAADPTTGGGEAESFFRAAPPLRDQDRVAGDLADFVARHSGNGG GGRLAGVVCVTSGGTTVPLEQRCVRYIDNFSSGQRGAASTEYFLKAGYAVIFIYRRGS KQPYCRFLPEDSFLDLFELGEESDIQVPESHAAVVKTAIRNYRKAIDEGLLLKLPFTT IFEYLQLLQMVGTAMNCLGRQGMFYLAAAVSDFYVPWESMAKHKIESASGPLNMQLNQ VPKMLFILRKQWAPSAFCVSFKLETDPDILLQKAEAALRKYGMNVVVANELANYKDVV VMVTSNGRTTVRRPSKEDDVEEQLIDLLVEMHSEHIMQLNQDVHKLT</aaseq>

Gene Sequence

<dnaseqindica>34..158#271..399#494..538#802..887#1052..1104#1218..1277#1936..2037#2458..2577#2759..3010#acctgcagtcccgtcgctctctcaccagcagccatggccgcggatcccaccaccggcggcggcgaggcggagtccttcttccgcgccgcgccgccgctccgcgaccaggaccgcgtcgccggggacctcgccgacttcgtcgcccgccactccggcaagtccctcctcccctcgcctcctccttccctctcctccgatctcatctccttcgatgcgtcgcgtggtgggtgagtttgctgatctcgatcgtgtttggtggtgggtagggagcggaggaggggggaggctcgccggggtggtctgcgtcacctccggcggcacgacggtgcccctggagcagcggtgcgtgcgctacatcgacaacttcagctccggccagcgaggggccgcgtccaccgagtatgcttacgtcatcatgatgccctctcgttgctgttctctctgctttgtacaactgtttggtgctaattttcagcttgctggtaaaattcaggtactttctcaaagctggctacgcggtcatcttcatctaccgccggtaagttcaaaaagaaaaaaaaaaagttcaacaattcaattgtaagttcagaggagctgaagttgttactgcatgctcgtttacgatcattgtgtagatagacagtgcttgggacgttttcagggaataaagaagagacaaaaaccagtgtagatagacagtgcaagctgttttgtttacttttctttcttttttgatttgttttagttctcaatgcctcatttagtggaagagttgtgagtgacatcagcgcctctttgcagtgggagcaagcaaccttactgtaggtttcttccagaggattcctttcttgatttattcgagcttggtgaagaatcagatatccaaggttggggattgatcctaaattatttatattcatgccaactgaattatctgttgtttttgcttcttttttttcactttttagatgtttgaccttaattataaacatttattgatatgaactgaaaagactaaatgataaactctcatgtaagttacttacctcagtcccagaatctcatgccgcggttgtcaagacagcaataagaaattatcggaaggtataaacagttctgttttaactccatgaaactagtctcatgcgctggttacaacttacaactggtcagactggtacagttgtgtgaccattggcttggttccttgattgcaggcgattgatgaaggcctattgctgaaacttcctttcaccactatctttgagtaccttcaggttttgctcattattcctacagaaacatgttctcatatacacgctatcataaagacagaggacttagtcagtctcacgagaaaggcttaggggtcttccggctagcaccacctgggttcgagcctcacccctatcctaataaatttcgatctgagagcccttcctctcatatccagtgttttttttttcagtcagtctcacacatagcgatgcaagtggatctggatggacttggcccaatggcccatgctaattcatttgcttgaattataattcgaatgcatatatacatatttgaccagaaagtgactcatcaattgagtaaaatgggccaatggccaggtgtccagtccaattgcatttgtgctcacacgtccactactgctggtgtttcaaacattttataccttgtttcattgaatatattattatatgacttagcattgcaaaagaattcaatcacgatctgtctccaatacattaaggtggggagatgcttggattttgaaaatccagtcataatttagactgtcttagatatcgaatgctttaggaacttgccaattttctgttatgttctacagtaaaagattaaccttggcatactgttatactgatgaggaatctgatatatctcttctgcttgtttttccaatagttactgcaaatggtaggtacggcgatgaattgcttgggacgccaaggaatgttttaccttgctgcggcagtttctgacttttatgttccatgggaaagcatggtaggctctactcttctgatcatttcattgtattaaaacaaacaaatagcctatatgttcactgcatttggtgtatatatcagttaatgatgctcgtaggcttctagatggcgtttgtcattggacattataggtgcctggcttttccctaaatcaggggatccttatttaagagatcacagccccctcttacttacaccatgttagagttataccatttcaaaatcttgaaacttaggaaccatgtattggtattgaaacatatgattcttttcgtaactagttataaaaatggtagttacgtagcatagtaatggactccttgttatcagatgtttcatatatattggcatattgcacccaatgcactagtagttgcaggcaacatggtcattatgtacctcgcacatgttttggcaggctaaacataaaatcgagtcagcaagtggtcctttgaacatgcaactcaatcaagttccgaagatgcttttcattctgagaaaacaatgggctccttcagcattttgtgtatccttcaaggttagtttgatgtattttcacacttccatatggagctatggttgctcaagcttttttctgcattaaagaaaacctcagtgtaccttcattctgctcgtgttactctcgaaatatcttattttctagagtcgagatgactagacccaccttactgctggcgcctaatacctgcacattacagcttgagacggacccagatatccttctgcagaaggcagaggcagctctgagaaagtatggtatgaatgtcgtggtcgccaacgagctagcgaactacaaagatgtagttgtgatggtcacaagcaatgggaggacaaccgtgcgaaggcccagcaaggaggacgacgtcgaagaacagttaatcgatctcttggtagagatgcactccgaacacatcatgcagctcaatcaagacgtgcacaagctgacataacaattatactgaatggaatacgagtatcagaattcttggcaactacatcatccaaagttgttacaacttacgagccacgagctgaactatgaatatcatgacttgtaaaaaagaaaaagaatagcatatgcccacaaatggtggtaaagtatgtatgtaccacattcaggtgtcaatgttacgcctggtgcttctgtaacttactacatgttaattccctgggaaagggccttgggagataggcatgattttttttttctaagttttccttttctc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0176100, RefSeq:Os08g0176100