Os08g0176900

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Revision as of 12:49, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0176900| Description = Similar to Transcription factor HBP-1b(C38) (Fragment)| Version = NM_001188481.1 GI:297726092 GeneID:9271290| Length...")
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Gene Name

Os08g0176900

Description

Similar to Transcription factor HBP-1b(C38) (Fragment)

Version

NM_001188481.1 GI:297726092 GeneID:9271290

Length

2482 bp

Definition

Oryza sativa Japonica Group Os08g0176900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:4504748..4507229

Sequence Coding Region

4505144..4505317

Expression

GEO Profiles:Os08g0176900

Genome Context

<gbrowseImage1> name=NC_008401:4504748..4507229 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:4504748..4507229 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>catcttgctgatgacgtgcaggccgaccatctccggcaggagacgctgcagaacatgtacaagatcctgacgctgccgcaggcggcgcgcgggctcctcgcgctcggcgactactgccagcgcctccgcgcgctcagctcgctctgggcggcgcgcccgcgcgagccggcgtaa</cdnaseq>

Protein Sequence

<aaseq>HLADDVQADHLRQETLQNMYKILTLPQAARGLLALGDYCQRLRA LSSLWAARPREPA</aaseq>

Gene Sequence

<dnaseqindica>1913..2086#ggatgcgtcgtcgccattagcggggagaggagcgggagagagctcgtcgggattattccgagctccatatccattgaaccgaaccagctctgagtgagagagagagagagagatcggagctgttgtttcttctcgtttctttgattggtggcggtgttgaattgaattgaattgatcgatcgattgtttcttggtgtggtggtggcggcgacggcgagcagcgcgccaaggtacatgacctcggcggcgccggcggccgcgcagttcgctgcgccggcgccggcggcgatggggatctacgaccgccggcaccatcccctcgccgccggcgtctggggagaccaccccttcatccgcccggacaccaccgccagcaccagcaacgccgccgccgccgccatggtcgtcgcgccgccgccgctaacagagcccaagttcgagagccaggtaattatttatttatttataataattaattaacacaacaacctccatcatcttgctgatgtatttcttgaaaatctttgattcgctcttgctgttggatcagctagctctgcctctgcagcatggagacgatcaagacaacgctgcagctctgcaagaatcgccgaggcatgcgtcggacagcttcgagcaggaggcgtccaagcctcgagacaaggtgggacaaaatctctctgacacaagctagctaaactaatcgcccgaaattattgctaattacgactagcttaattagaattaacaaactataattcgattgattgttcgtcctttttctcgattagatccagaggcggctcgcgcagaacagagaagcagctcgcaagagccggctacggaaaaaggtgagcaagctcatgatcacatcacattattcgtctcattgttcatgattttgtattcaaagatatgatttaatttaggtttgtttgattttgtgacaggcttacatccagaacctggagacgagccggatgaagctggcgcatctggagcaggagatcacccgagcaaggcaacaggtaagaacaaaaaaaagaaaaagaaaaagaaaaccagcttgtgacgagcagattcttctccatggctgtcattgctgacgtatggctgagctatgcagagcgcgtacatcaaccgcagcagcaacccagccaccctaccagcgcccatcgattcaggtcagcttctctccaagaatccatcgattgatcgagctcgacaagaattgtgatggaattttgttgatttgttgtgttcaggtgtggtgacgttcgaggtggagtacgcgcagtgggtggaggagcaggggaggcagacggcggagctgagggcgtcgctgcaggcggcggcggaggggccggagctccgggcggtggtggaggcggcgctggcgcactacgacaggctgttcgcggcgaagcgtgaggcggcgaggcgcgacgtgttcttcgtgatgtccggcgtgtggcgcaccggcgccgagcggttcttcctctggatcgccgggttccgcccctccgaggtgatcagggtgctcgcgccgcagctggagccgatgacggagcggcaggccgccgacgtgcaggggctccagcagaaggcgcgccacctcgaggacgcgctgtcgcagggcatggacaagctgaagcagacgctcgccgactcgctgctcgccgaggccgtcgtcgtctccacctcctgcgacgcctcgccgccgccgccgccgccggaggaggaggagccgtcgtcctccgccgccggtgacggcggatgctacatggcgcagatggggagcgccatgggcaggctcagcaacctcgtcgcgttcgtcgaccatgtacgccatcgccgatcaccaccacctacctcccatctccatgtccgacgacgagcagagctcggctgacatcttgctgatgacgtgcaggccgaccatctccggcaggagacgctgcagaacatgtacaagatcctgacgctgccgcaggcggcgcgcgggctcctcgcgctcggcgactactgccagcgcctccgcgcgctcagctcgctctgggcggcgcgcccgcgcgagccggcgtaaagcgagctgagctcgccgccggcaacggccagcctgatcgatcaccggaggaggagcaagatgtcgtcgctgagctcgccggggaagacgacatggagctcaagtggctcagtttgagttctctgcattttcatttgcaaggacaggaaagaaattaaacggacgtgttcacttcatcataggatagcagcagcagcagtagctaggaggaggaggaggaggaggagaatttgaatttgaatttaaaagacgtgtaaatatttactacagtaattaacttgcttgggtagttatttgcgtcgctcaacttgtaattgctgccatttccatggataaaaaaaatgtcagggatggtcatatgaaaaattgggagtgattccaggcgcctgaagtttg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0176900, RefSeq:Os08g0176900