Os09g0414900

From RiceWiki
Revision as of 07:25, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0414900| Description = Similar to GASA5-like protein (Fragment)| Version = NM_001069705.1 GI:115479152 GeneID:4347055| Length = 1535 bp| D...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os09g0414900

Description

Similar to GASA5-like protein (Fragment)

Version

NM_001069705.1 GI:115479152 GeneID:4347055

Length

1535 bp

Definition

Oryza sativa Japonica Group Os09g0414900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:15482692..15484226

Sequence Coding Region

15482819..15482890,15482999..15483055,15483165..15483192,15483815..15483996

Expression

GEO Profiles:Os09g0414900

Genome Context

<gbrowseImage1> name=NC_008402:15482692..15484226 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:15482692..15484226 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctttggctggtaggctacttgtcctcttcgccattgctctccttgccatctccatagccgagcacaaggcgctagccaagggatcaaccagtgagcatgatgataacgtttaccaagtaagcaagggaggacagggcagcctgaagagctatcagtgctcgccgcagtgcgcgtaccggtgcagccagacgcagtacaagaagccgtgcctcttcttctgcaacaagtgctgcaacgcctgcctctgcgtgccgtcgggcctctacggcaacaagggcgagtgcccctgctacaacaactggaagaccaagcgcggcggccccaagtgcccgtga</cdnaseq>

Protein Sequence

<aaseq>MALAGRLLVLFAIALLAISIAEHKALAKGSTSEHDDNVYQVSKG GQGSLKSYQCSPQCAYRCSQTQYKKPCLFFCNKCCNACLCVPSGLYGNKGECPCYNNW KTKRGGPKCP</aaseq>

Gene Sequence

<dnaseqindica>128..199#308..364#474..501#1124..1305#aaactcgtcttggaacccactgctttgcctataaatatgtagctatagcttctctgctttccgtcgcttaacacagttaacaccaacgcagtggtgctctctcttcagttagtggagcttcagagaaatggctttggctggtaggctacttgtcctcttcgccattgctctccttgccatctccatagccgagcacaaggtgagatctagtctagctatatatgtgtgcgtagttcataagtttctccaagaagcttaagcttaatcatctgctaactagctagctgttcttgcatttttcaattaggcgctagccaagggatcaaccagtgagcatgatgataacgtttaccaagtaagcaaggttagtttcctcacaacagatgaatcggtccctagttcagtttctgagatccagcagatttaatcatttcactctacttactttctttgcgtaaaaatcgtaattgcagggaggacagggcagcctgaagagctatcgtaagtgataaatacttcctgtgatcctgtccatgcaaacctttctgtagttagctgcatttttttcaccccttcacctttcacctgtcctctgtggcatgcatgcgtcgtgcatatgcatattagttcaggccgcatggtctgatctaataaagaatctgctgctgctaaaatttaaattttaaaacttaattttaaaataaatttagggtattttttatattacattggtttctataagtagctatatatatatatatatatattatttttattcgctaataagcagtagtatacactatgttgcattgttgtgggtcagctaggtgacactacagccttacgtacaggtagtgttttgtcaagtacatctcctatacagagctaaagtacagtggaccagtagcattaatccactcattacttcattagtgataaaacagtgacgatccaaaaattcagataacttgaaacaagctagatagatctgcacgctgaaatgcagcagcagtaaccagccgcaaacgtttgcattgcatggtttgtccaagacacggctaagctgcagccagatgctaatgaaaatgctgtaacgtgtaaatttgttgggtggatgctgcagagtgctcgccgcagtgcgcgtaccggtgcagccagacgcagtacaagaagccgtgcctcttcttctgcaacaagtgctgcaacgcctgcctctgcgtgccgtcgggcctctacggcaacaagggcgagtgcccctgctacaacaactggaagaccaagcgcggcggccccaagtgcccgtgaaaaaaccttcagtggacgctcgaattctttggtcatttcagtacccaaactctgctcgcacgatgccgattgattctagcatggccgtcggggcagaggcagctgtggcttcctatacattacatacacacggttgtaaaaatgtacatctgggctatccattgctgtacgcctgaacggttccagaggggtgatgcaaatcatgcagatgcagctgtatcgctaccacg</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0414900, RefSeq:Os09g0414900