Os08g0178700

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Revision as of 12:49, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0178700| Description = Similar to Calmodulin-binding diacylglycerol kinase| Version = NM_001067665.1 GI:115475066 GeneID:4344812| Length = ...")
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Gene Name

Os08g0178700

Description

Similar to Calmodulin-binding diacylglycerol kinase

Version

NM_001067665.1 GI:115475066 GeneID:4344812

Length

4964 bp

Definition

Oryza sativa Japonica Group Os08g0178700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:4598754..4603717

Sequence Coding Region

4599012..4599353,4599516..4599632,4599764..4599851,4600276..4600353,4600780..4600847
,4601340..4601422,4601706..4601754,4601882..4602005,4602283..4602368
,4602579..4602707,4602812..4602934,4603046..4603267

Expression

GEO Profiles:Os08g0178700

Genome Context

<gbrowseImage1> name=NC_008401:4598754..4603717 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:4598754..4603717 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaaggggagatggatactgtggtgggttcatcatccaagccatgcgggccgctgacggattaccgcattccggattacatcctgaggccggatgcgcagcgggtgcttcttgatcatgcgcccccgtgccccgtgctggtgttcatcaattctggatctggtggtcagctcgggagcagcctgatcaaaacctaccgtgaacttctcggtgaagcgcaggttttcgatgtctccgaagaggctccggataaagtgttgcaccgtttgaatgtcaaccttgagaagctcaagatggatggagacattcttgctgttcaaatttggagaactctcagaataattgttgcaggtggcgatggtacggcaagctggctgcttggggtagtcagtgatctcaagctttcacaccctcctccaattgctactgtgcctctgggaaccggaaacaaccttccattttcatttggatggggaaagaagaatccttgtactgaccaagagtcagtaaaatcattccttgggctagtgaggcatgcaaaagagatgaaaattgatagctggcatatcatgttgaggatgcgagctacaaaggaaggtccatgtgatccaatcgcccccttagagttgcctcattcattacatgcatttcaccgtgtgtcaagtagtgattccctcaatatggaaggttaccacacattccgtggaggattttggaattactttagtatgggtatggatgcagaaatttcttacggatttcattctgaaaggaagaaaaatccagagaaattcaaaaaccagctgacaaatcagggtacatatgctaaggttggacttaaacaaggatggttttgtgcttctttaagtcatccatcttcaaggaatattgctcaacttgcaagtgtgaaaatcatgaaaagagccggtagccactggcaagaacttaacattcaccacagcattcgatcaatcgtctgtctcaacctgcctagtttctctggaggtctgaatccttggggcacacctggcacaaggaaagtagaagagagggagctgacggcaccttttgtcgatgatagacttattgaggttgttggattccgtgatgcctggcacggacttgtcttgctggccccaaatggacatggtacccgccttgcgcaggcccaaaggatccgtttcgagttccacaaaggcgcagcagagcacaccttcatgaggatcgatggggagccatggaagcagcccctcccaaaagatgacgacaccgttgttgtggagatctcccaccttggtcaggtcaccatgcttgccaacgagccctgcaagtcgaagagcgtccatgacgaccaatcctcccacgcacaacacagcggccatggcaacaacgacgacgacaaggacagcatggaggacgaagatgagtgggaggatggcaggaggaagtttggtgccgcagatacattcaagatccctgacgaggttgacattgctcacctcagctga</cdnaseq>

Protein Sequence

<aaseq>MEGEMDTVVGSSSKPCGPLTDYRIPDYILRPDAQRVLLDHAPPC PVLVFINSGSGGQLGSSLIKTYRELLGEAQVFDVSEEAPDKVLHRLNVNLEKLKMDGD ILAVQIWRTLRIIVAGGDGTASWLLGVVSDLKLSHPPPIATVPLGTGNNLPFSFGWGK KNPCTDQESVKSFLGLVRHAKEMKIDSWHIMLRMRATKEGPCDPIAPLELPHSLHAFH RVSSSDSLNMEGYHTFRGGFWNYFSMGMDAEISYGFHSERKKNPEKFKNQLTNQGTYA KVGLKQGWFCASLSHPSSRNIAQLASVKIMKRAGSHWQELNIHHSIRSIVCLNLPSFS GGLNPWGTPGTRKVEERELTAPFVDDRLIEVVGFRDAWHGLVLLAPNGHGTRLAQAQR IRFEFHKGAAEHTFMRIDGEPWKQPLPKDDDTVVVEISHLGQVTMLANEPCKSKSVHD DQSSHAQHSGHGNNDDDKDSMEDEDEWEDGRRKFGAADTFKIPDEVDIAHLS</aaseq>

Gene Sequence

<dnaseqindica>4365..4706#4086..4202#3867..3954#3365..3442#2871..2938#2296..2378#1964..2012#1713..1836#1350..1435#1011..1139#784..906#451..672#ggagaagagcgaacacttctccttctctctcttcttcttccctcatccccgcgcggcctcccgcctccgcctctgctcgcgagccacccatttcccggcgacagcggcctccctccgccgccgccggcgatctgacactggcgcccgcgccaccggccgagaaaggtagttccttttccagtcctgggtaacgatccaaaggcggtttctttttttatcttctcttgtggatgataagttcgaatttttccctttcatccatggcctcctgcgatttatgatctgttgcgagacaaatcgacacgggtgtttgtgggtttggtgtgttggattcgactgtttcttggcctgaatcatctcaggagaaggaattgaatttgtggtggtggcatttgttgtggtgttctttttaggggaattgaagtgtcataatcgatttgcaggagcaggatggaaggggagatggatactgtggtgggttcatcatccaagccatgcgggccgctgacggattaccgcattccggattacatcctgaggccggatgcgcagcgggtgcttcttgatcatgcgcccccgtgccccgtgctggtgttcatcaattctggatctggtggtcagctcgggagcagcctgatcaaaacctaccgtgaacttctcggtgaagcgcaggtatatcgtctgcgtgtttggaaatgtgatttcctttcttgccttgtggcgtcaggaaaggaatgtggcttttgttatatcagttgttgatggctgctgtgttcttttcaggttttcgatgtctccgaagaggctccggataaagtgttgcaccgtttgaatgtcaaccttgagaagctcaagatggatggagacattcttgctgttcaaatttggagaactctcagaataattgtgagtgatgatgctttgaggttatattatgcagatttgcagagtaggaagtctctttggctttccatttccatttctgttgacttaaaagaggtttcaattaggttgcaggtggcgatggtacggcaagctggctgcttggggtagtcagtgatctcaagctttcacaccctcctccaattgctactgtgcctctgggaaccggaaacaaccttccattttcatttggatgggtaagtggtcagaaattaatgtgtacttaacaaatcatcttcttgtgtcaattagtttttgaagggaggtggcaaaagtgatgtacttaaactagagtccattatgtataagttgttctgtgttaaatgatcttttaaatgattcttgcctgaactttaacctgttcctgatcatggtcttgtatacttttgctgaattaaacatcgcagggaaagaagaatccttgtactgaccaagagtcagtaaaatcattccttgggctagtgaggcatgcaaaagagatgaaaattgataggtaatgccataaagatatcactttactttaagctttgacttttgccttgatcctgctcataagggttaagcggctgattaacttatttaatatttgccataaacccccaaacttgcaatcaatcaatactgaactcttttaatgaaccttaagtagttgaataattacctcttcaaatctgtttgtccttcctcccagtctaaaacatgatttcccttttatacctcattcaaacacaacagaagactacaatgtaatgtgcacatgaatgtttcagctggcatatcatgttgaggatgcgagctacaaaggaaggtccatgtgatccaatcgcccccttagagttgcctcattcattacatgcatttcaccgtgtgtcaagtagtgattccctcaatatggtaagacaatctgtccagtttttctaagttactatgtttcttgttgacgaaaattgttatatgtcaagacccaagtggcattgaatttaattcatttcctcaattggtctttttttttccccttcaggaaggttaccacacattccgtggaggattttggaattactttagtatgggtaaggctttgtctgttcatggccacttccagttatggaccctaaacagtctgatggtttggtttctagtttaccgtggaacttgatgttgcatgctagtttgtgctatgaagatgcaggcacctgctggttccatgtacggcaagtactgtgggactcatgatcactactgtcgtagtttattatatttggaaaaaagatcccaagtttcttcaagaacctagagcatatattgattcaatgactcagaaattcaaattttcatacgtgatgatctttgcaggtatggatgcagaaatttcttacggatttcattctgaaaggaagaaaaatccagagaaattcaaaaaccagctgacaaatcaggtatattatattcttattattgtgcattgtgatgatttcttttgtactgtttcgctgtgctgcagattctgaattactcgtaagtttaaaattgttccaactgaactgcctctttatttggcaggcagagacttgagacgtacaattgaccttatttagattctctatgtgctcaacacccatttcttatgtcttcctgtgggatcttactatacagaacttttatgagctatgagaagtgaggaagtgtcgaatgggaccaatacccattgcatgttactggaattcttaactgtagttgttacaaaatattgcacttacatctctagttctgtcaaattgattcctaaatatgtaatccttgatagctaatatacctgtaaatatgtgaaatttacttctatattgatttagataaatgtccctctagtcaatttcaatctggctgaatgacttaactttgccaggtgttaatccatttaatctatacagggtacatatgctaaggttggacttaaacaaggatggttttgtgcttctttaagtcatccatcttcaaggtagcttgttgatttatcattaacatatttcatggtatacctgttgtgctagttgtatacttgtattgtgttatctttgcagtcaaggtgtctctaatttaatattataccacctaactcctataaatatctgtgagtaatgtggagagagaagttatagggagtatacccactccagcatttttgggggtgttcaatgtacattgcatttacaaactacaccaatcaattcatttgtgcccttttttgttccttcatattagcaccatccttgcagtttatagattcagtccacaaaatttattgtcaaagcttaaacctgtacttggcaatgttaaatttgaaatttggtgtaatcaatttgtgtgcgttcaagttgtttccttcttttcgttttggttgtaaggttgagtgcttcatttccaggaatattgctcaacttgcaagtgtgaaaatcatgaaaagagccggtagccactggcaagaacttaacattcaccacaggtaaacattgttcattccttttgttgtactatgaattattttttcccccgtgtactgttatttgagcctactagtatgatatgatacaagaaagcttctcatttgcacttggaatattttgcttatactgtttcttttttgggatacgcaaaaggcttgcgtatcttttctattaagattggaagcagtatacattactttgaaagctgtaaaaagaactgaatcgaaaagaaaagaaaacagaagagaagaaaaactcggatatactgtttcagttttgcttccttgcaagttacaatatgttccttggatttcttgcttgcacatgttggcaacatttctgatttatgttctgcttgttgatggaggatgctaccataatctatgagcaaagttgtgacctgtgtactactgcctcttgcagcattcgatcaatcgtctgtctcaacctgcctagtttctctggaggtctgaatccttggggcacacctggcacaaggaaagtagaagaggtgagtttacatgcactacgcttgtcattcaacacgtgaatttcgcattgtagctattcacagattatttactggaaatcttcagaggaactaataatcaaacctctgtcttgaaaaaacaaaatctacagagggagctgacggcaccttttgtcgatgatagacttattgaggttgttggattccgtgatgcctggcacggacttgtcttgctggccccaaatggacatggtacccgccttgcgcaggtatgaagtatatgtaaaagtgcttccattttgtccatttgacatcccagaactgaaaaccacttcttccccattgtgccgtagtcataattttctacgtcaagaactagaactagtatagtcctctccattcaagcttatgtggacatccttcaaaatcaggcccaaaggatccgtttcgagttccacaaaggcgcagcagagcacaccttcatgaggatcgatggggagccatggaagcagcccctcccaaaagatgacgacaccgttgttgtggagatctcccaccttggtcaggtcaccatgcttgccaacgagccctgcaagtcgaagagcgtccatgacgaccaatcctcccacgcacaacacagcggccatggcaacaacgacgacgacaaggacagcatggaggacgaagatgagtgggaggatggcaggaggaagtttggtgccgcagatacattcaagatccctgacgaggttgacattgctcacctcagctgaactcagaattggtatcttttctaggttgcattcttgatgttcataatcttcttcagtaaagtgatttttgtcttcgattccttcaacattataagagtggaatttagtaattcgttcactgcaaaatttggaatgtatagaccataggtttggaacatctatagtagaacccaagttggtaacatttctgatttcttgtttattgttcagcagaaatttgtgttattttgggaagaaaataaagttattaaactgttg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0178700, RefSeq:Os08g0178700