Os08g0178900

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Revision as of 12:49, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0178900| Description = Homeodomain-like containing protein| Version = NM_001067667.2 GI:297608069 GeneID:4344814| Length = 2728 bp| Defini...")
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Gene Name

Os08g0178900

Description

Homeodomain-like containing protein

Version

NM_001067667.2 GI:297608069 GeneID:4344814

Length

2728 bp

Definition

Oryza sativa Japonica Group Os08g0178900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:4616686..4619413

Sequence Coding Region

4616997..4618053,4618752..4618864

Expression

GEO Profiles:Os08g0178900

Genome Context

<gbrowseImage1> name=NC_008401:4616686..4619413 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:4616686..4619413 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatggatttcccttccctccaccttttgatggatcctacagaggtggattccccagctcttcagcttggttggatgcgtccggtggtgatgaatcttctcctggatcatgtgataaagatgtacatccacgtggtggtttcatgagctattttggaaatcatgcacaaaactctcatttggttggtgcgcctatttacattgctgatgctagttcaccaccagaggtggaaattttacaaggcaatgatgatggaaatggcaatggcaatgttaggactgagaagaggatactgtggacagaggaagaggatatcagattgatgagtgcttggatagagcattcaactgactctacatgtggagcagataagggaggtggccaatattggggtgaagttgttgaatcgtacaacaagactaccccacctctcagaaaaagaaatctgaagcaatgcaaggatagatggcacaagattaataggtggacggatctctttgagtgtgcttatgtaaaggctcgtagaatttttacaagtggatattctaatcaaatgtggattgatgcagcacacaaattttatgtggatgacaataaagaggcaaagctaggaccctttgtgctaatggaggtttggaaaatatgccgagaagtctcaaagtggaaaacatacaatgaaaacatgaggaatgcacgtaaaaggaaatcatttcacttggaaggagactctgaggaagctgatgacacttttgatgagatgccaaagcgaccaatgggtcagaaggccgctaaaaaggcagctctagatgcaaaaatcaagtcaaatggtttgggcagtagtgatgatggtcactcaaaggagtctcctattcagttagacaaatttgatagatatagcaaattccaggaggaaaacaatgacaagcgcatgaaactattggacagacaggaaaaaatatcttctgagaagctagaggccacaaaaattgcccaccttacagcacaagagtacaaagaaggaaggaagcttgagaaagagtcaaagatgatggagacttataacagcctcatctcacaagatacaagttcaatgtctgctgaggaaaaggcgcagcgagttagtatgatgaagtgtcttatgaaaactcttttccctgaatctgattga</cdnaseq>

Protein Sequence

<aaseq>MDGFPFPPPFDGSYRGGFPSSSAWLDASGGDESSPGSCDKDVHP RGGFMSYFGNHAQNSHLVGAPIYIADASSPPEVEILQGNDDGNGNGNVRTEKRILWTE EEDIRLMSAWIEHSTDSTCGADKGGGQYWGEVVESYNKTTPPLRKRNLKQCKDRWHKI NRWTDLFECAYVKARRIFTSGYSNQMWIDAAHKFYVDDNKEAKLGPFVLMEVWKICRE VSKWKTYNENMRNARKRKSFHLEGDSEEADDTFDEMPKRPMGQKAAKKAALDAKIKSN GLGSSDDGHSKESPIQLDKFDRYSKFQEENNDKRMKLLDRQEKISSEKLEATKIAHLT AQEYKEGRKLEKESKMMETYNSLISQDTSSMSAEEKAQRVSMMKCLMKTLFPESD</aaseq>

Gene Sequence

<dnaseqindica>1361..2417#550..662#tggttgagtcaagcgacgggagctgcgtcctctcgcgaggcgacggcgacgacccgtgctccgaggcggaagaggcaagctcagcaccgttgtacgagctcgtcgtcccgaggcgacggcgcggcaggatcccgcgcggagagcgcgagcgcgggaaatttccccgcaaaatccaggttcgtccaactcccctcccactcccccaatccgggaaatttgcccgcgaaatccaggaaatttgctccagcatatagcgcagcaatctctcccaatctccaactcccctcgcttgatttgggtgctgctgagatgtccacggcggctgcaggtaggaagaagaagggaggcacacctgaggcctcagatgcggcggcggcagccccagcccgtaccctaggttgtggtgttgggtcggcgacggcggctctccccttcagtcgtggcggccgcggtgtcgggttagcaccgccgccccgctctctcggccgtggtggcgggccagcagtggcagcaatccctccaggcggcttccccagttattcagcgtccatggatggatttcccttccctccaccttttgatggatcctacagaggtggattccccagctcttcagcttggttggatgcgtccggtggtgatgaatcttctcctggatcatggtaatcttttattcttgttctctgttctagcagaatatgcttgtgtgatttgtttccttgtggatgtttgattcatgaactgctaatgattcttgtgggttaaaaattgccccttacatcacaagagaacatagaatatgcttgttttttcccatctgaatgcctactatgttctgtgttagaactaattttagtgttacaaagtcataaaaatcaggctttattgtacatcccctgccatgtgatgagcttctctgcattctgcaacttaaccattcacagtttacttaaatgtttataactgctaatttagtactgattggaaaaggcattctacaatttaattacttgactctggaattttttgcatcatgtagcatgttatcctaatgttattgaggttatattcaacttttgagagaaataaaaatctgatggttgtttatattatgaatttcttgtggattggatgaagctatctctagatgttactttgtttatactacctgattagtaatgtcagtaatcccttcctttgttatatggtcacagtagttagctagaaccctgtaactgaaatgaactagctgccatgagataattcgcaaaagcgagccaaactcaaatgcagagattatccctgtgatctaagatattatccaatttatttgcctcaaatatatgctattatcctgcagtgataaagatgtacatccacgtggtggtttcatgagctattttggaaatcatgcacaaaactctcatttggttggtgcgcctatttacattgctgatgctagttcaccaccagaggtggaaattttacaaggcaatgatgatggaaatggcaatggcaatgttaggactgagaagaggatactgtggacagaggaagaggatatcagattgatgagtgcttggatagagcattcaactgactctacatgtggagcagataagggaggtggccaatattggggtgaagttgttgaatcgtacaacaagactaccccacctctcagaaaaagaaatctgaagcaatgcaaggatagatggcacaagattaataggtggacggatctctttgagtgtgcttatgtaaaggctcgtagaatttttacaagtggatattctaatcaaatgtggattgatgcagcacacaaattttatgtggatgacaataaagaggcaaagctaggaccctttgtgctaatggaggtttggaaaatatgccgagaagtctcaaagtggaaaacatacaatgaaaacatgaggaatgcacgtaaaaggaaatcatttcacttggaaggagactctgaggaagctgatgacacttttgatgagatgccaaagcgaccaatgggtcagaaggccgctaaaaaggcagctctagatgcaaaaatcaagtcaaatggtttgggcagtagtgatgatggtcactcaaaggagtctcctattcagttagacaaatttgatagatatagcaaattccaggaggaaaacaatgacaagcgcatgaaactattggacagacaggaaaaaatatcttctgagaagctagaggccacaaaaattgcccaccttacagcacaagagtacaaagaaggaaggaagcttgagaaagagtcaaagatgatggagacttataacagcctcatctcacaagatacaagttcaatgtctgctgaggaaaaggcgcagcgagttagtatgatgaagtgtcttatgaaaactcttttccctgaatctgattgaacaggtaaacaattatgcaatatctgaaacttacatgttattgccacaaatatgtgtgattacaagtgtcttaggcagtcccttcagtgtctaatatgaaccttactgttattgatacagatatgtcaattttgcaagtggaggctactatctttggctatctggtgaatgccaaattatcttgctgttttttctatcctaaaccaacttttccactttttctatcctaaactctggctattggcaagttatgtttaatctttcagcaggttcagtgtatgtctcagtttatataatttttgttcatgctc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0178900, RefSeq:Os08g0178900