Os08g0179400
| Gene Name |
Os08g0179400 |
|---|---|
| Description |
Helix-loop-helix DNA-binding domain containing protein |
| Version |
NM_001188484.1 GI:297726098 GeneID:9271688 |
| Length |
3411 bp |
| Definition |
Oryza sativa Japonica Group Os08g0179400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:4644301..4647711 |
| Sequence Coding Region |
4644301..4644474,4645241..4645291,4645634..4645699,4645839..4645904,4646048..4646239 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:4644301..4647711 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:4644301..4647711 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgtacggcggcggcgcggcagcgggtggtgctacgacgacgacggggagccacggcggcggcggcggcgactggtggagcgccgcggtgtcgtcgtgctcggcgccggcgccggagacgatgcaagggttcggcggctggtcggccgcggtggtggccgtcgacggcggtggcaacacgtcgaggtcagctgctggtaacactgcttcgtcggagtcgcctggatcgctcgccaccggaagctccatcactttccaggagcccgccggcggcgtcgccgacccggccgccatcgccgtgcacgcgcagacggtggccggcggcggcggcggcggctggaatcagcagcctttcttggatgggagtggtttccatggctacatgagctcatcaagaaatgatcaccataccaatcatcatcatcatcagatcaacacgccgagtttgatgagcaactcatcatcaaataacggcgtgatgctgcaagagcaccaacatgaccagaattaccagttcctctccaacctcggcttcgagctgctctcgtcgccgacctcgccgtacggcggcggtggcggcttccgctcctcgctgctcagaagcctcacggagccggcggcggcagcgaagcctaatgactcgccggggtttcagcagtatcatcatcatcagccggcgatgaacctgcagccgccggccgccgccgccgggagagagccactgcagttcaccaacagcacggcggcgccgttttggaacccttcctccaggttcaccgtcgcggcggagggtacagcactaggtggtgccggagcatcgccggcgcagcctacgccggcgagccttgcagctaagagggcattagaaggagtaggagactccagctcaatcatcacgaagaaggcgaaggctgattccacgccactaaagaaatccagaaccgggacgccatcgccattgccgacgaccttcaaggcatgtgtctacatatatataatatttaatttgtcccaaatggtgattgatttccttccaataaagttccatgtgaggaaagagaagctaggggacagggtcacagcactccaacaactagtctccccttttggaaagacggacacggcatcggtgctccacgagacaatcgagtacatcaagttcctgcacgatcaagttggtgcacttagtgctccttacctaaagaacaggcaacaagtgccccacttgaagaactccaccggcgtcgacaacgatggcggcggcggcggcggcgaggcgacggcggctagcaagagagacctcaccggaagagggctgtgcctggtcccgatatcgagcaccttcgccgtcgccagcgagacgccggtcgatttctggacgccgttcggtgcagccttccggtag</cdnaseq> |
| Protein Sequence |
<aaseq>MYGGGAAAGGATTTTGSHGGGGGDWWSAAVSSCSAPAPETMQGF GGWSAAVVAVDGGGNTSRSAAGNTASSESPGSLATGSSITFQEPAGGVADPAAIAVHA QTVAGGGGGGWNQQPFLDGSGFHGYMSSSRNDHHTNHHHHQINTPSLMSNSSSNNGVM LQEHQHDQNYQFLSNLGFELLSSPTSPYGGGGGFRSSLLRSLTEPAAAAKPNDSPGFQ QYHHHQPAMNLQPPAAAAGREPLQFTNSTAAPFWNPSSRFTVAAEGTALGGAGASPAQ PTPASLAAKRALEGVGDSSSIITKKAKADSTPLKKSRTGTPSPLPTTFKACVYIYIIF NLSQMVIDFLPIKFHVRKEKLGDRVTALQQLVSPFGKTDTASVLHETIEYIKFLHDQV GALSAPYLKNRQQVPHLKNSTGVDNDGGGGGGEATAASKRDLTGRGLCLVPISSTFAV ASETPVDFWTPFGAAFR</aaseq> |
| Gene Sequence |
<dnaseqindica>3238..3411#2421..2471#2013..2078#1808..1873#1473..1664#585..1083#1..356#atgtacggcggcggcgcggcagcgggtggtgctacgacgacgacggggagccacggcggcggcggcggcgactggtggagcgccgcggtgtcgtcgtgctcggcgccggcgccggagacgatgcaagggttcggcggctggtcggccgcggtggtggccgtcgacggcggtggcaacacgtcgaggtcagctgctggtaacactgcttcgtcggagtcgcctggatcgctcgccaccggaagctccatcactttccaggagcccgccggcggcgtcgccgacccggccgccatcgccgtgcacgcgcagacggtggccggcggcggcggcggcggctggaatcagcagcctttcttgtgagctctagctatatgactcatgatcatatgtgtatgcatgatgaattgataatacacatataatcaaccaaagcatatatatagatttcatatatactctacatgcttaattagttgctcatgatcttagtgagattgatttatttattcatgcatgttaagttggtgaataattatcagtggaatgatttaattatatgcatatatgtgtgatttctgatcaagggatgggagtggtttccatggctacatgagctcatcaagaaatgatcaccataccaatcatcatcatcatcagatcaacacgccgagtttgatgagcaactcatcatcaaataacggcgtgatgctgcaagagcaccaacatgaccagaattaccagttcctctccaacctcggcttcgagctgctctcgtcgccgacctcgccgtacggcggcggtggcggcttccgctcctcgctgctcagaagcctcacggagccggcggcggcagcgaagcctaatgactcgccggggtttcagcagtatcatcatcatcagccggcgatgaacctgcagccgccggccgccgccgccgggagagagccactgcagttcaccaacagcacggcggcgccgttttggaacccttcctccaggttcaccgtcgcggcggagggtacagcactaggtggtgccggagcatcgccggcgcagcctacgccggcgagccttgcagctaaggttaattggcacacacttgtacgtatatggacatagttgatagttaattgtgcgcctatactaactaaaagtaattaacacaatatcacaattagccacacctcttatatagtatgagttgttattggacataagtgaattgtgcatatttactcatcagcttaatattttgggttaaactaattagtagtataatcttatgcttagctgcgggatatgtgaatatgaatatatgttatatattatagaaattatagatgtatatatttaaataatgtaaaaataatgtggagataatgatttgacattgtttaaatattaagtttggtgcatgcatgcaactgatcaatagttcacatttgtttatttttttgtgttaatatgtgtagagggcattagaaggagtaggagactccagctcaatcatcacgaagaaggcgaaggctgattccacgccactaaagaaatccagaaccgggacgccatcgccattgccgacgaccttcaaggcatgtgtctacatatatataatatttaatttgtcccaaatggtgattgatttccttccaataaagttccatgtatgtatgagtgagctgttacaaatcatgagagaagtaaaccgttagagatcataaagttccaccttaattagttcagtcaaactgttaattagatgtattaatgtacatattgaatttcacataaattatatatgtttcaggtgaggaaagagaagctaggggacagggtcacagcactccaacaactagtctccccttttggaaaggtgagtgcaccatatatatagttcttgaaattaagaatcttattaagatcgatcaaacatgcaactctgatcgatccctttacaacaacaacaacaacaaaaaaaaatgatggatcaacctcggcgtgcgtgcgtgcagacggacacggcatcggtgctccacgagacaatcgagtacatcaagttcctgcacgatcaagttggtgtaagtgcgccatctagcggcaatattttgttctacccttccccttttaatcatatacatgtagaaattaacaacattggtccatgttctgatccaagtatccagtgcaacacctagctagctactgccttaattattgcactaattaatatttctttaaaacatttcttcttgcataaatgctctctgcttatatatatatatgtatatataatttcctcaaacatattcttcaaacatgtagtgcacgcatacattctgctttgcactataatatattcaaacattgttcatatatatatagtgtactcatgtatgtgttatgtgtattcatatatgcaggcacttagtgctccttacctaaagaacaggcaacaagtgccccacttgaaggtactatatatatacaagctaaaccatgcagtgctagctcacatatactacacacaatataatgcttttctcttcttcttttcacacacatattgctatatatcgtcattgtttgatcatcaagtacgtattgcatatattatcgatgcatgagggtatatacccgcataaaaacatgcaagcttgttagtgtagttcattccaacttttgctagtacaaattttggaagaaaaaaataactagatttgaataagcaggcaaagaaaccctgcttgcttgcccggtcaacttacatcgatccctagcatatatatacattattcatgttaatttaattactttacatgcttcctttaatcaatctcattttttcaattatgcttatgcttatcagttaaaacttgaattttcaaacttaaatttggagttaattaattttgccatttttctcgttatagtctattttccagtgtttgcttttaaatcgttaagaacacatatataaaatttttatttataaattatttttcatttgtaaatatgccgttttcatttcttcctccaatatgccaaactatggagctgaatatttcagaactccggtgacaatatttactgtacatgcttttaatttttttcttcagttcacgcatatatattgctatatatcgtacgtcgtcgtttgatcatcaagcttgaacgtatatagtgcacatatgctcactatatacatgctaattaattcgttgattaatattatctcagaactccaccggcgtcgacaacgatggcggcggcggcggcggcgaggcgacggcggctagcaagagagacctcaccggaagagggctgtgcctggtcccgatatcgagcaccttcgccgtcgccagcgagacgccggtcgatttctggacgccgttcggtgcagccttccggtag</dnaseqindica> |
| External Link(s) |
