Os08g0180100

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Revision as of 12:49, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0180100| Description = Similar to Enhancer of zeste homolog 2 (ENX-1)| Version = NM_001067672.1 GI:115475080 GeneID:4344819| Length = 3978 ...")
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Gene Name

Os08g0180100

Description

Similar to Enhancer of zeste homolog 2 (ENX-1)

Version

NM_001067672.1 GI:115475080 GeneID:4344819

Length

3978 bp

Definition

Oryza sativa Japonica Group Os08g0180100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:4691658..4695635

Sequence Coding Region

4691917..4691934,4692041..4692141,4693061..4693160,4693238..4693333,4693453..4693620
,4693714..4693839,4693913..4693966,4694092..4694339,4694434..4694542
,4694631..4694930,4695146..4695310

Expression

GEO Profiles:Os08g0180100

Genome Context

<gbrowseImage1> name=NC_008401:4691658..4695635 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:4691658..4695635 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctagaacggccaaagggagaccgtgatgggtatgacttggttttcgttgatgcaatgcataaggctaactatgcgagcagaatttgtcactcctgcaaccctaactgtgaagcaaaagtaacggctgtggatggtcattatcagattggaatttacactgttcgaccaattgcagaaggcgaggaaatcacttttgattacaactctgttactgagagtaaagaagagcacgaagcgtcagtttgtctctgtggaagtcaaatatgcaggggcagctatttaaatttttctggggaaggagcttttgaaaaggtcttgatggaattccatggtgtgctcgatcgacatagtcttctgttacaggcttgtgaagcaaactctgtttctcaacaagacttaattgacttggggagagctggtcttggtacctgtttgcttgctggtttgcctggatggcttgttgcttacactgctcacctggtgcggtttatattctttgagagacagaaacttcctcatgagatctttaaacacaatgtggacgagaagcgccagtttttcacagatataaacatggattccgagaagaatgatgccgaggttcaggccgagggagttctgaattcaagattacagaatttgactcatacacttgacaaggtaagatatgtcatgagatgcatatttggggatcccaagaatgctcctcctccactggtgaggctaactgggagaagtctagtttctgccatctggaaaggggaaggctcgttagttgatgaacttcttgagtcaatggaacctcatgttgaggaagatgtacttactgacctcaaagccaaaattcgtgctcatgatccatctggttccgaggacattgagggagaaatccgaagttctcttttatggttgcgtgatgagctgagaactctttcatgcacatacaagtgtcggcatgatgctgctgctgatttgattcacatgtatgcttacacaaagtgttttttcagagtccgagattacaagacggtaaaatctccaccggttcttatcagtcctcttgatttaggtcccaaatatgcagataaactgggaccaggcttccaggagtactgtaagacatacccagaaaattattgcttaggtcaactcatttattggtatagccagaatgcggagcctgaatctagattgacaagagctagaaagggttgtatgtcattgccagatgtatcctccttctatgtgaagtcagtaaaaccaacacaagagcgagtctatggcagcagaactgtgagattcatgttagcgcgcatggagaaccaggcacaaaggccatggcccaaggaccggatatgggttttcaagagtgacccaagattctttggtactccaatgatggatgccgtattgaataattccccccttgacaaggagatggtgcattggctcaagacaagatccaacgtcttcctaggctag</cdnaseq>

Protein Sequence

<aaseq>MLERPKGDRDGYDLVFVDAMHKANYASRICHSCNPNCEAKVTAV DGHYQIGIYTVRPIAEGEEITFDYNSVTESKEEHEASVCLCGSQICRGSYLNFSGEGA FEKVLMEFHGVLDRHSLLLQACEANSVSQQDLIDLGRAGLGTCLLAGLPGWLVAYTAH LVRFIFFERQKLPHEIFKHNVDEKRQFFTDINMDSEKNDAEVQAEGVLNSRLQNLTHT LDKVRYVMRCIFGDPKNAPPPLVRLTGRSLVSAIWKGEGSLVDELLESMEPHVEEDVL TDLKAKIRAHDPSGSEDIEGEIRSSLLWLRDELRTLSCTYKCRHDAAADLIHMYAYTK CFFRVRDYKTVKSPPVLISPLDLGPKYADKLGPGFQEYCKTYPENYCLGQLIYWYSQN AEPESRLTRARKGCMSLPDVSSFYVKSVKPTQERVYGSRTVRFMLARMENQAQRPWPK DRIWVFKSDPRFFGTPMMDAVLNNSPLDKEMVHWLKTRSNVFLG</aaseq>

Gene Sequence

<dnaseqindica>260..277#384..484#1404..1503#1581..1676#1796..1963#2057..2182#2256..2309#2435..2682#2777..2885#2974..3273#3489..3653#agggtcttggagttgtttgtaacaaaacgggtggatttggtgtagacgactttgtcatcgagttctttggggaggtatgtgatttttacgatcaacaaatcttcctagatgacatgcaaagggatataacaatggtataatatttgtgaaattgcaatatctgcaggtatacccttcttggagatggtatgaaaaacaagatggcattaagcatatacaaaacaatagcgacgatcaagctcctgagttttacaacattatgctagaacggccaaaggtattagtgcaatctcaaattttttaatgtgaccttgcatgtgacttatgttattccaggtcaaggtacatataactgatcgttttacctttgttatgataaaaagggagaccgtgatgggtatgacttggttttcgttgatgcaatgcataaggctaactatgcgagcagaatttgtcactcctgcaaccctaactgtgaagcaaagtaagcttcttaatcttcagattagtaccttgtgtggtgtatgtgtactgccttatcactcctcctatagtacttcctctgtttcaaaatatagtgtgcattttgtttcgttaggacaagagtttggccaacgattactctattatgatataatttttacgacacataaatttattagattcatatccagaagtacttatgattatacttttgtatcacaaatgatattctaatagagcgattgttggtcaaagtcgtcctaacgaaacaaaatatgccctttgttttgaaacagagggagtacctttttagtgttgacctgtacttttggactgtatttgtggaaggggtttactctgttaactaaatttatatatgtggtgttgcagtttgcacgtgatatatgcttggccctatcatttacgcaactaccttctattgtctttttcatattttgaaaggcctttgtgacttcattgttgttgtattctgtggtggatccatcctatgctttgaactgtagtgggggaatgcgatttcactcttcctgcatgtctacttcattctatttggttcaccatgcgctgttgtatttttttctgaacaaagtccctgatggcctgtttttgttgttccagtagtgaaattcagaaattgagaacaaacagggaagggggcagcaatcaatggatggctaacaatttataaaaactgaactgcacatttatagtttaagcattttctgtacacctgtacctaatattgaaggactcttaagattgaaggagaactggcccatattggtttccacaaagcccactttccatgctagtcaaatttataaattagtaaaatgcactcataagattacatgttatacctgtaataataactcacgattattaaaatatatttccagagtaacggctgtggatggtcattatcagattggaatttacactgttcgaccaattgcagaaggcgaggaaatcacttttgattacaactctgttactgaggtgattgccatttctagtttctgtataagttctaacgtaaattgctttatcttatgaatacattctaattatgccagagtaaagaagagcacgaagcgtcagtttgtctctgtggaagtcaaatatgcaggggcagctatttaaatttttctggggaaggagcttttgaaaaggtaaacttcattcttgtttacagtaatttaggaactgacacttgcagtttatcaaattgtcatacactgaattttatactgcatcatttcctctcatctactaatatcatttggaacaggtcttgatggaattccatggtgtgctcgatcgacatagtcttctgttacaggcttgtgaagcaaactctgtttctcaacaagacttaattgacttggggagagctggtcttggtacctgtttgcttgctggtttgcctggatggcttgttgcttacactgctcacctggtaattgtagttaccattttcttaaagcttcttttttcttgatacagtaatcagtatcgtgatccctcatggctatttttcctgtaaacaaaggtgcggtttatattctttgagagacagaaacttcctcatgagatctttaaacacaatgtggacgagaagcgccagtttttcacagatataaacatggattccgagaagaatgatgccgaggttcaggtgggtcttcgaacggctacaagttgcaacgtaatttacataaaatcgatctaattctgtcatcactactcaggccgagggagttctgaattcaagattacagaatttgactcatacacttgacaaggtgcgcattttatgccccctagcttgaagttattcagtataagtgaacaaaaaacatgcactatgcactaacaacccaaaagaagtctcttctgatgcatttttatggatcattgttatgttcaggtaagatatgtcatgagatgcatatttggggatcccaagaatgctcctcctccactggtgaggctaactgggagaagtctagtttctgccatctggaaaggggaaggctcgttagttgatgaacttcttgagtcaatggaacctcatgttgaggaagatgtacttactgacctcaaagccaaaattcgtgctcatgatccatctggttccgaggacattgagggagaaatccgaagttctcttttatggtgagtttagaatatattcttgttttgtttgaccattaatctgactcttccctccagtcacctgtatctggaatctgaccgcccttttcttcaggttgcgtgatgagctgagaactctttcatgcacatacaagtgtcggcatgatgctgctgctgatttgattcacatgtatgcttacacaaagtgttttttcagagtccgagtaagtgaaaacttcctcttaattttgcaacaaatgtttgtgatttttctctgtaccaaaggactgactcaaggatcaccacatgcaggattacaagacggtaaaatctccaccggttcttatcagtcctcttgatttaggtcccaaatatgcagataaactgggaccaggcttccaggagtactgtaagacatacccagaaaattattgcttaggtcaactcatttattggtatagccagaatgcggagcctgaatctagattgacaagagctagaaagggttgtatgtcattgccagatgtatcctccttctatgtgaagtcagtaaaaccaacacaagagcgagtctatggcagcagaactgtgagattcatgttagcgcgcatggtaagtgcttaccttttatatgtcattgtggctaaaatattccaaattttgttcttggaactcgttcagtgtggaaaacaaaagagaatatttgttctagacaatattaaatcatcttctgttggattgagtatttctcttcatatatgcaatatattacagtttctttccctgactcccatctttctcaatgaaactgcgtggttttattacaggagaaccaggcacaaaggccatggcccaaggaccggatatgggttttcaagagtgacccaagattctttggtactccaatgatggatgccgtattgaataattccccccttgacaaggagatggtgcattggctcaagacaagatccaacgtcttcctaggctagccaaggaattgtaggcagagggtattggtttttttcctttggagattttagtcagacaccattcttttttcttcctactcacacctttcctacctaatcatggggatttagcttttagatggcagggtaacaacagtctctctcaccttccccatttgtacagccccctcctccccttaccttgtagagatgtgttccattattaactgatagatccatcattgatttaatgtagcgccttttcccgttgcgtagaattgtcacctcccaatgtgcaatgtggatattcatgtgtaaatgcaaaacagtagcaatcttaaattcc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0180100, RefSeq:Os08g0180100