Os09g0119100

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Revision as of 07:17, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0119100| Description = UBA-like domain containing protein| Version = NM_001069126.1 GI:115477991 GeneID:4346417| Length = 6078 bp| Definit...")
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Gene Name

Os09g0119100

Description

UBA-like domain containing protein

Version

NM_001069126.1 GI:115477991 GeneID:4346417

Length

6078 bp

Definition

Oryza sativa Japonica Group Os09g0119100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:1411041..1417118

Sequence Coding Region

1411349..1411435,1411546..1411719,1414316..1414530,1415616..1415769,1416836..1417015

Expression

GEO Profiles:Os09g0119100

Genome Context

<gbrowseImage1> name=NC_008402:1411041..1417118 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:1411041..1417118 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtccgcggcggtgtgcggcaaacgggcctcctccttcttcgaggacctcccccattcgccgtcctccccgccctccaagcgcgcctgcttccgtggaggttcctcgccctcccgcccgctcgccgacccggccctcgtcgcccagatccgcccgcggttcccctccgtcggcctcgaggttattgagaacgcgttggaggaatgtgaaaacgattttgattcagcaataaagttcttgttcaatttgcatgtaggacccacagaatgtaatgtggatcctatttatcaatctccatcaggaatgtctactgagcttcaagtggctgatgaaggtattttggctggtaatgaagctgctgtacctataggaaatgctccctgcgctgataactttccatcaagcagcacccagtgggttgagattcttgtgaacgagatgactaatgcctctaacatggatgatgcaaaggctcgtgcctctagagtattggaggtgtttgagaagtccatgaccgctcatgttggtgcaatggggagctttcagaaggaaagctctgtgtataaggaacagtttgaagcaataaccagggaaaatactattctaaagaaagccgttgcaattcagcacgagcgccaaaaggagcatgatgggagaaaccaggagattcagcaactcaagcagctggttgctcagtaccaagagcaaattagaagcctggaggtaaacaactatgcactgtccatgcatcttaggcaagctcagcaagccaactcgattccagggcacttccatcgggacatcttctga</cdnaseq>

Protein Sequence

<aaseq>MSAAVCGKRASSFFEDLPHSPSSPPSKRACFRGGSSPSRPLADP ALVAQIRPRFPSVGLEVIENALEECENDFDSAIKFLFNLHVGPTECNVDPIYQSPSGM STELQVADEGILAGNEAAVPIGNAPCADNFPSSSTQWVEILVNEMTNASNMDDAKARA SRVLEVFEKSMTAHVGAMGSFQKESSVYKEQFEAITRENTILKKAVAIQHERQKEHDG RNQEIQQLKQLVAQYQEQIRSLEVNNYALSMHLRQAQQANSIPGHFHRDIF</aaseq>

Gene Sequence

<dnaseqindica>5684..5770#5400..5573#2589..2803#1350..1503#104..283#ccaaccatttctcctgggccttgctccgctccacctcccaccaaaccctaaccctaaccctaacgcgcctaccacgcgaggcgcggcggcggcggcgggcaccatgtccgcggcggtgtgcggcaaacgggcctcctccttcttcgaggacctcccccattcgccgtcctccccgccctccaagcgcgcctgcttccgtggaggttcctcgccctcccgcccgctcgccgacccggccctcgtcgcccagatccgcccgcggttcccctccgtcggcctcgaggtgatgccgtctgctcgtctccctcgtaaattagcagtcatgcgtgttatgatttgagatggaagtttaatctttggtcccaaagtagtacctggtgctggtgctgttgctatgtaaggggtgagccaatcaagcacatcctgctcatgattatgcgtggtgctgtctgtgccgcttgctattgctaggtttaaaggttagatggaattgcagcaaagctaccatatgtacatgtaatctaatcatttagcgatctctttgttttgttccaatcttgcaattttctagtttcctgacgaaataaatgtggcttctgtgttcctatattttttcttcaattatggaatgcaggtctcgcagactttgttcctggttagggtttgtgttaggatttatttgagaatggtgacttggtttatgttacagttcattttttccttggagtgatagcaattttttctatgcatggatttgtatttattattttagtttagtcattgttttctttgggaactgtcgattgtcgtttttgagcggaactggtagatattgagaacttacttacattaatggcttttaactgatgggaatctggagtgcatcggagcatttattaatttgttatccttttgtccgttgatgccgatccttgcgatccgcgcacacctcttcccagaaaagtttttgttgcctagaaaaacgtattattcatataagaattatagccagcaattctatgaagcatctatgggccttatatggttgctttcctcttttcttaaaatggccactcgcgggaatggtatgttaccatatttttttgtttgttcagatagtcatttttttctgttcgtttggattctctgaacaatgtgcttgttgttataacaaagcataatatcctacaatatctggtaaaatttccttaacctgaccactaaagattttcacttgtgtttgtcagctttctagatacaattcgtcaacatattcaaagtatgttcacttgttggagctttttaacgatttagtaacttaaaccttatggaaacttttgttcctgcaggttattgagaacgcgttggaggaatgtgaaaacgattttgattcagcaataaagttcttgttcaatttgcatgtaggacccacagaatgtaatgtggatcctatttatcaatctccatcaggaatgtctactgagcttcaagtggctgatgaaggtaaactttggacctctggatgttgtctatcttctatgatgttatgttgataccatctataagacttctatcttctatgatgttatgttgataccatcttaggtgtccaaactcctgagggttttcattatcaaactgtcttgagaattcttgcaaaattcctgtgttgtgaacagaccctatggaatcagtttttcagtgccaatgttagattgtctaatgatgaattgtaatacaatacggatctgttttcttagctttgttattcacaacaacttttccaattggagcatggctttctatgaaattagtgacacagttttatctcattgaacgcatgattgtggtgcaagtgtcaaacttgggcacgagtgtctgatatggtagcctagggaaaataggattcaaggatttgattggtatatttgaattatttgaaatcacaaaagactcatgcactaatgtaggcacaaaagattattcaactatgtagtgtgaataatcatatttactaagcaaaaaaaaggcattggcacaatgagaaaaggctgctcattaattcaatcacccgtatagaaaatatttcaattcctttattctgtgcatctcacaacctctagatcccctctcctccctagacctgactcttgccatctcctttctctgaaatctcatctgatttcaacgtttgatcaagcaagattccaatacaaaatttagtttttaacgtcttccatttaatatgctctgcatgctatcaagcaattttgtaaccatatgttttttctttatttgaggtgctgacttgaatgcttttggatctccaagacttcaactaaagttgcatggctattgctgtacaacttgagataaaatatcgttttattatatgcttttcactttgcatcctttgtaacttcttctgtatagtgcaccaacaaacttatgctttcgaactcagtatttcaaatttagttctaggcatagaatagaactcctgttagcattaaccaatttgaccactttgagaatattgttctgaagaatattattaagtatggcagatgtgttgctttatggtccaggtattttggctggtaatgaagctgctgtacctataggaaatgctccctgcgctgataactttccatcaagcagcacccagtgggttgagattcttgtgaacgagatgactaatgcctctaacatggatgatgcaaaggctcgtgcctctagagtattggaggtgtttgagaagtccatgaccgctcatgttggtgcaatggggagctttcagaaggtaattcaaatcccttccaagagtgcttcagaactttcagggctgcttgctagttatctaggggtgaaaacggatcggattcggacggataatagctataccatatcctaaaccattttttttaaacggatgcggagcgggtgcggatgacgtgcggatgcggatgcggagcggattatttcggacgtcggattcggtgcggagtcggtgcggagtcggttcggaaacggacaaaaagttgtcggatgtcaagtttgtattcaatccatacaacaagaggacgccaatacaattagccgcaatacgatggcaaaataacatctaaacatgatctcagttctctaggaaaaaccaaccaaaacacatcaataatataattttgcttaatataacacatccaacaaaataatccaagatacatccatcactcattagtcactggtcactgcattgcttaaaatttaacaatataacttataagtcatcactcatcagtagttcagtacgacatgcatgctgcatgcagcatatgagccagcaatgttatccacatcaacaacaacaatagtgttgggactttcattgccactgcccacagttgatggcccttcttccccttcagctggagctggcgacgaggcagcaatgctactttcagtagcagtagcagcagctgctgcttttgcccctctttttctaggtgccattttttacgatcctaatgaatgatgaacaattaatcaaattataacttgctattgacgtaatttccgtaagcaaagctcatctctacatttctaaatcagtaaatcccaaatttgatacttcaaattggactgcaagtgtacaagaaaacaatacctaatctatcgtcgacttgtcgttggactggaacagcagctgcagctctaggcctcgagcagttacagcacgacgacgacacggcacggctgacgacagtggtggctggcgagtggcgacgccacgacggggatggctgctggcgacagccaacagggatggcggctgggctggtgacggggatgtgacggtgcactggcggcccggcgctggagacgtgctgatgggcgacagtggacggagtggtggcggcgccgaggagccgaggaggcgaggacgaatggcagcggcgccaccagcctgtactgcagccgaggaggagcggcggcggcgctagcagccaaggaggagcggccggccggcgctgggtcgccgtcgcgctgggtcgactcgccgtcgcgccgccactcgcccactcccctacgactgagagctgacgggagaaagagagagagtcagagagagagagagggatctgccgatctgggggacagggggaggagaggaaggattaggttagggttagaatagatgggttattgggctagaatgctagatgggcctgaaagttgcggattatccgccaaacactatatcggataatccgattaaaaaatcggataatccgaatccgtcggatatcattgataccacatccgcatccgcatccgcatgacaaaatccgcatccgcatccgcatccggccggatatctaacaacccttaccatatcctcacatcggacggattcggatcggatcggataatatccgctccgttttcacccctatagttatctgacctttgatgtggttatgatattgtcgtgttctttcatccttgtccattctaggttaccaaggtatcgttgttcctactgggtaacctagtggtcagcgaaaaactgtttgagtggagaatcattttaaacatatgagcacattttggcaactctgggttttacatacttctccaggacatgatatagatggataaactaaatgtaaaaaaaaagaagcaaaatgatactttggccagcagaaaacttcaaatcttgaggaccgattctaaaatatggacacatttgatcaagcatatagccatataccaactattgttactaggctagttaaataacttttggggatgccaaaacatggattgacttggatgtatgagttgggagtggattttgatacctcaaggggatgtcctattgttgtttgcatgtcacttaaaaagttataaaaaaaattgaaaaaaatttgagaagatgtattgacatgttatcacttcacaaacatacaagttcaaattcaacttctacatctcgcaaagaaaaaaaaacaaatttgactgaatatgtgttaactagctgtagtttaatttttttttcgttgcgagatgtataagttgaatttgaatttgcatgtttgtggagtatatcacatgttaatacatcttctcaatttgttttcataattatttgactgatgcaaacaacgaggtgacatccccttgagggatcaaacatcatgaatatctatgatggattaccacgtagacttttaacatcttttatttggatgctttccagaggattaacttccaatggttatgaactgaattgcactgcagatttgtgctgattataatctattgtttactatggagaacacttgatggtaagttttaaaataaattaacttctctctgatattcttactttcaaacaggaaagctctgtgtataaggaacagtttgaagcaataaccagggaaaatactattctaaagaaagccgttgcaattcagcacgagcgccaaaaggagcatgatgggagaaaccaggagattcagcaactcaagcagctggttgctcagtaccaagagcaaattagaagcctggaggtataacaatcttagttgttttcgctattcttgtttattggccctttttgaagcatcataagtggttctggctaccgatgttttattttattcattttcttgctgtgcaggtaaacaactatgcactgtccatgcatcttaggcaagctcagcaagccaactcgattccagggcacttccatcgggacatcttctgaataacttcatacctaaaccggaggtttccatagaatgagatatcgttcacccaacaattaagggcagagttcttgttcttggcttatatccaatatattgccaagttataaacatagtttaatgtatgttgtagacctgtgtgtacatgcttgtcttgcgttgtgctgttggccccctaagatgggattgtgtgcgagcaagcgcaaagaaagcttagttcattcgaacggcagacagaatatgatcaagttagaaaagaaaaaaagaaaagaaaagaaaagcgaaagagcctttaaaattattctcc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0119100, RefSeq:Os09g0119100