Os08g0188000

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Revision as of 12:49, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0188000| Description = CRS1/YhbY domain containing protein| Version = NM_001067689.1 GI:115475114 GeneID:4344836| Length = 2909 bp| Defini...")
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Gene Name

Os08g0188000

Description

CRS1/YhbY domain containing protein

Version

NM_001067689.1 GI:115475114 GeneID:4344836

Length

2909 bp

Definition

Oryza sativa Japonica Group Os08g0188000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:5146427..5149335

Sequence Coding Region

5146952..5147065,5147644..5147771,5147901..5148126,5148219..5148346,5148846..5149335

Expression

GEO Profiles:Os08g0188000

Genome Context

<gbrowseImage1> name=NC_008401:5146427..5149335 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:5146427..5149335 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gacctcctcctcctcccatggcggcgcgccaccgccgccggtgaggccatcgcccgccgcctcaaccaccaccgagccccgcccttctccgatcccgacgacgacccgccgttcacgcggctcgcggagcgcccgcctcgagctccctcgaagaagaagaagaaggaggaggaggaccagggcggcaggatcaggccgccggagccggcgagctccgacctgccgttcgacttccggtactcctactcggagacggacccggcgtggaggcccatcgggttccgggagcccacccggttctcgccgttcgggcccggccggctcgaccggccatgggacggcgtcgccgcggcggcggcgcgcggggagggtgcgggtgcggcggcgacgagcagggaggaggttcttggcgagccgctggcggaggaggaggtggcgcagctcgtggagaggtaccggcacagcgactgctcccggcagatcaatttgggcaaaggcggagtgacacacaatatgattgatgacatccacaatcactggaaacgtgcagaagctgttaggatcaaatgcctgggagtgccaactcttgacatggacaatatatgcttccatcttgaggataaaacaggtgggaaagtaatctaccgtaacataaacatccttatcctataccgtggtcggaattatgatccgaaacagcggcctcaaataccactaatgttgtggaagccacttgctcctatttaccctaggcttgtgcaaaatgttgctgatggtttgactttcgagaaaactaaagaattgaggaatacgggattaaattcttcacctcttatgaaattaactaggaatggtgtttatgtcaatgttgttgatagagtgagagaggccttcaagactgtggaagttgtgaggttagattgctctcatgttggtagcagtgattgcaagaaaatcggtgtgaagctaagggatttggttccatgtgttcccctattatttaaagacgaacagattattctctggagaggaaaggtgaaacaggagaactctgtttcacttcaattcagtcctgaaccatcatga</cdnaseq>

Protein Sequence

<aaseq>DLLLLPWRRATAAGEAIARRLNHHRAPPFSDPDDDPPFTRLAER PPRAPSKKKKKEEEDQGGRIRPPEPASSDLPFDFRYSYSETDPAWRPIGFREPTRFSP FGPGRLDRPWDGVAAAAARGEGAGAAATSREEVLGEPLAEEEVAQLVERYRHSDCSRQ INLGKGGVTHNMIDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKTGGKVIYRNI NILILYRGRNYDPKQRPQIPLMLWKPLAPIYPRLVQNVADGLTFEKTKELRNTGLNSS PLMKLTRNGVYVNVVDRVREAFKTVEVVRLDCSHVGSSDCKKIGVKLRDLVPCVPLLF KDEQIILWRGKVKQENSVSLQFSPEPS</aaseq>

Gene Sequence

<dnaseqindica>2271..2384#1565..1692#1210..1435#990..1117#1..490#gacctcctcctcctcccatggcggcgcgccaccgccgccggtgaggccatcgcccgccgcctcaaccaccaccgagccccgcccttctccgatcccgacgacgacccgccgttcacgcggctcgcggagcgcccgcctcgagctccctcgaagaagaagaagaaggaggaggaggaccagggcggcaggatcaggccgccggagccggcgagctccgacctgccgttcgacttccggtactcctactcggagacggacccggcgtggaggcccatcgggttccgggagcccacccggttctcgccgttcgggcccggccggctcgaccggccatgggacggcgtcgccgcggcggcggcgcgcggggagggtgcgggtgcggcggcgacgagcagggaggaggttcttggcgagccgctggcggaggaggaggtggcgcagctcgtggagaggtaccggcacagcgactgctcccggcagatcaatttgggtgagttccagaaattgcattcctttctgatgcttttagctcgtaaaagtattgtttacaaaatttattcggattttcttgattgcttgattgattgattgattgagcacaagcagctagtatgttcatgacgaattgagaagttcacacgagaagagtgtgttggttctagcgagttggttatgcagtataaagtgcccaatttttgttttttaattcactaaagtttgatgctttatgaacctcctgagtgccgctactgaattccaccattaattgggatatcatgtcagcatgaaagtattagagtgaactccaaattgtagaatctaaatcaacacttagcatcgatggagtgacactatgggtctatggcatcatgcagagcgtacaggttccattgtgacatttcaatatttcatttatcctgttgctcaagagcattaagttgtgctttggaaacatttcccagttatgcaatggtgtttcatgttctcaggcaaaggcggagtgacacacaatatgattgatgacatccacaatcactggaaacgtgcagaagctgttaggatcaaatgcctgggagtgccaactcttgacatggacaatatatgcttccatcttgaggtcacagcagtactacttacttggggaaatactggaaactacatttttacttcctattttgtttggtctcatgtcagtgcactattgtgcaggataaaacaggtgggaaagtaatctaccgtaacataaacatccttatcctataccgtggtcggaattatgatccgaaacagcggcctcaaataccactaatgttgtggaagccacttgctcctatttaccctaggcttgtgcaaaatgttgctgatggtttgactttcgagaaaactaaagaattgaggaatacgggattaaattcttcacctcttatgaaattaagtaagttggaacctttccagcaaaacattcgccatacaattgtataaccacgatttacccatccatcccactgttgtgttatcgagttccttttttgtaactgatgatgtgagcttctatgttgtacagctaggaatggtgtttatgtcaatgttgttgatagagtgagagaggccttcaagactgtggaagttgtgaggttagattgctctcatgttggtagcagtgattgcaagaaaatcggtgtgaagctaagggtatgttgatatgatcccaggcttttgctgctgcatatgtgtatagtaattttttactttctgctccttattatactatatgcatattttcccccattttttaaactcttattgcacctaataaaatttctgttatattctcgaatttacaagtacaattgtgcaaagagttaagaaagagatgctcagatgattttttttttcttgaaatgttgcttagatgaattgactgtattagctgtttgcatatgtatgctattcaggtgaggttggtgaagaaaaagagcggcaccatatctttttataaccttagataaattttatagctaagtaactgtagtgttcatttcaacatagatgccaattgcattaccgtttctacaatttgtttgttcattctcacccatgtagttgagaaccatataacacagagtggaaagatcttactccttttctaatgcattgatagatacactggagaatttagtatttggatgatagaaagcacgtattatcttctctcttgcaaatcgccccagcatgaatgacggttttggccttctctatccatttcacaggatttggttccatgtgttcccctattatttaaagacgaacagattattctctggagaggaaaggtgaaacaggagaactctgtttcacttcaattcagtcctgaaccatcatgatatcaagtggcttaaatacatgagttgctagaagaaccctgctgcttggattacttccatcagttccatgggatgtcatgtgatcagaacaaattgttgaaaacctattacggggttaccagaaacattagaaaccgcgccggttgattattacatttcctgcagctatctggaatttggagttgtctgaaagagttgccagtgttgcatgagatgaagaccctgctctatttgagtgctgagcattgaacagtacagacgcacattgaatcattttttcaccttggaatgagtactgtgcttccagccaagggattgatatcttccatcatctgtttctttgttcaaatggcacatgttcctgctgcttctgctatccgggcagatatcaaccatctagattaggacatagtatcaaaagttgagaggtacatcatgttgtaacactagtggtacagacaggccttttgaattagaaggcgatcattcagagcctcaaatgaggttgtgggctttgtggctgct</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0188000, RefSeq:Os08g0188000