Os08g0190700

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Revision as of 12:49, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0190700| Description = Conserved hypothetical protein| Version = NM_001067702.1 GI:115475140 GeneID:4344849| Length = 3138 bp| Definition ...")
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Gene Name

Os08g0190700

Description

Conserved hypothetical protein

Version

NM_001067702.1 GI:115475140 GeneID:4344849

Length

3138 bp

Definition

Oryza sativa Japonica Group Os08g0190700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:5313680..5316817

Sequence Coding Region

5313680..5314006,5315035..5315160,5315243..5316817

Expression

GEO Profiles:Os08g0190700

Genome Context

<gbrowseImage1> name=NC_008401:5313680..5316817 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:5313680..5316817 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgcgctcgtcgaccacccgccccgccgcccccgtccgcctccgccgcaggccgctgaaaacccccctcgtcgttgctgccgctgccgcctcatcgtccgccgccgtggggctgccccgcgggggcgggccgggcacgccgcacctgcggtggggcgccggggagcgggaggaggaggagaacggcggggagaaggggaatgcggtgggggcgcccggccgccgctccgtgaggcggctcgccgcggcggtgtggcggctgcggccggcggaggaggcgcctcctccggcttcccgccacgccgcggatcgtgcctgcctcgagcatataccaaggcatctacaagtccaactacttaggaaggatcatgttagcactcgatatggcctgaagaatgagacttcaagccccatatctgtcttggaacgacatagtggagagctccacaagggccaacttcatcttgcttcagacgtgttgcctataaccagcttggagaatgtaacaaagtgggagcctgacggcatagaggggatagaatcagatggtgcctatgtgatcgccagccaactaaatctcattgaagaacagaaaggggaaaattatgtatcgaacctccaggtggagcttcaacagacacgggatagggtcggcaagctagaagctgagcggatttcagccaagaagcaacttgaccacttgttcaagaaactgacagaggagaaagcagcttggcggaagagagagcacaagaaggttcaagccattcttgaagatatgaaggcagaccttgaacatgagaagaagaaccgtaggcaactagagaagattaacataaagcttgttgatgagttgaaggaggtcaaaatggcagcaaacaatctgttgcaggagtatgacaacgagaggaagacacgtgaactcactgaggaggtgtgcaccaagctggtgagggagttagaggaacacaaggccgagattgaaggcctgaagcaagactctctgaaactgcgtgcagaggtggatgaggacagaaaattgctgcagatggctgaggtgtggcgtgaagagcgtgtgcagatgaaacttgttgatgctaaactcacccttgaagccaaatacgaagagttgagcaaactgcaactagatgttgaggcaatcatcgcctctttcagtgacaccaagggagacgataccatagtacaaacagcaaaaaacatcttacagtcaattgaatcaaccagggaacaggagatcaaattcacgtatgaaccaccaccagcatcggatgatatactagcaatcattgaagagttacgccctagtgaagagctcgagacaagggaaactgaaccatgccataagcacaactctccagtacacgaatcagaaaaccagcaagattccccaatgactgacatattcctggagaacccaaccaaactgtactcaaatagaagccattacaatgagagtgacatgggtgattccagcagctgggaaaccataagcaatgaagagatgcaggggtcgagctcttcaaggaatggaagcgaaccttcagtcaacaagatatgtgacaagatttcctggaccagtggggatgattctgaggctgggcagaatgacaacctgagtggtgagttgagcaaggcctacttcgcagacagaaaaccatccaagaagaaagagtcagccatatcaaagttctggaagtcatcccctctgaaaaactgcgaaatcttcaagatagatgtcgtggagatgatgaacaggagatcatcgaacgaaaggctgtcaaatggcatgcattcttcgaacgaaggcgccaatcaagatgcaggactcagctcgccaagtatagggcaatggagctcacctgactcgatgaacagccaactcaaccgcgggttcagaggctgcatggagctggttcagaagcagagcttaaaggcgaagcttctagaagctcggatggagagccagaagatccagctccgccatgtgctcaaccagaaaacctag</cdnaseq>

Protein Sequence

<aaseq>MPRSSTTRPAAPVRLRRRPLKTPLVVAAAAASSSAAVGLPRGGG PGTPHLRWGAGEREEEENGGEKGNAVGAPGRRSVRRLAAAVWRLRPAEEAPPPASRHA ADRACLEHIPRHLQVQLLRKDHVSTRYGLKNETSSPISVLERHSGELHKGQLHLASDV LPITSLENVTKWEPDGIEGIESDGAYVIASQLNLIEEQKGENYVSNLQVELQQTRDRV GKLEAERISAKKQLDHLFKKLTEEKAAWRKREHKKVQAILEDMKADLEHEKKNRRQLE KINIKLVDELKEVKMAANNLLQEYDNERKTRELTEEVCTKLVRELEEHKAEIEGLKQD SLKLRAEVDEDRKLLQMAEVWREERVQMKLVDAKLTLEAKYEELSKLQLDVEAIIASF SDTKGDDTIVQTAKNILQSIESTREQEIKFTYEPPPASDDILAIIEELRPSEELETRE TEPCHKHNSPVHESENQQDSPMTDIFLENPTKLYSNRSHYNESDMGDSSSWETISNEE MQGSSSSRNGSEPSVNKICDKISWTSGDDSEAGQNDNLSGELSKAYFADRKPSKKKES AISKFWKSSPLKNCEIFKIDVVEMMNRRSSNERLSNGMHSSNEGANQDAGLSSPSIGQ WSSPDSMNSQLNRGFRGCMELVQKQSLKAKLLEARMESQKIQLRHVLNQKT</aaseq>

Gene Sequence

<dnaseqindica>1..327#1356..1481#1564..3138#atgccgcgctcgtcgaccacccgccccgccgcccccgtccgcctccgccgcaggccgctgaaaacccccctcgtcgttgctgccgctgccgcctcatcgtccgccgccgtggggctgccccgcgggggcgggccgggcacgccgcacctgcggtggggcgccggggagcgggaggaggaggagaacggcggggagaaggggaatgcggtgggggcgcccggccgccgctccgtgaggcggctcgccgcggcggtgtggcggctgcggccggcggaggaggcgcctcctccggcttcccgccacgccgcggatcgtgcctgcctcgaggtaaccacgtctcttcctccgttcgaacaccctcaaatttcaccacccccaattttagcccgcattttgctccaatttgcgccgatttgggacgaacgggtggccgcattgaatcccgcaccaccacctcgtgtaccgccgccgttcatgcccgtggcggcagggcagcagtagaggcgtttagccgttgcggcagctgtacggcgctctccagatcgaagcacagatcccgccattaatggcgtcctatcagcatttggtgatccatcttgatcgttgggagtggcatttattgacaaccctatcgccatgggcgcgtttcttgtgatccgctaatcttttgctcatgtgatccatccactcctactcctctttacgtggggacccggctctggcattgaatcttcggcgcgcagagagcaatcagtgtgtacttctgtaccgtgcttggttcttgatatggaagtaatccgcctgtcccctgctgctactgttgctgctgcttctagttctttggatgctggaatttactggtaccttgtcagcttcttgctgtaatgggaatgtttctactgcggttattataggtgtcagctctgtgcatctgacaatttggttccaagagcaaacaaatgcattgtttgtgtgagctgggttcagagatgtctcgcagtaactttgtggaggctggggggttgctctggtgtttcatggtggaaagatacgaccaatcgaaaagcagtataactgctagagttttatagacatggatattcatcttgggttatctgcgcaatagttttgtttgtgacttgtgagctttgcttgttttgatgtgagagttattttaaaatgtaacaacatgaatcagcagatctgactctggatgtctaaatttgttaccttcatagtaacagagtgagtcatatgcttctgggaggagatgaaaatgaaaacatttttagtttctggttattgacattctgttggtcgtatgttaacttgttggttacatttacttatgacagcatataccaaggcatctacaagtccaactacttaggaaggatcatgttagcactcgatatggcctgaagaatgagacttcaagccccatatctgtcttggaacgacatagtggagagctccacaaggtaatgctagaaactgcttgcttcaaacttgctggtatttcttctgtactgtatagttaatttggcggatttaattgtgtagggccaacttcatcttgcttcagacgtgttgcctataaccagcttggagaatgtaacaaagtgggagcctgacggcatagaggggatagaatcagatggtgcctatgtgatcgccagccaactaaatctcattgaagaacagaaaggggaaaattatgtatcgaacctccaggtggagcttcaacagacacgggatagggtcggcaagctagaagctgagcggatttcagccaagaagcaacttgaccacttgttcaagaaactgacagaggagaaagcagcttggcggaagagagagcacaagaaggttcaagccattcttgaagatatgaaggcagaccttgaacatgagaagaagaaccgtaggcaactagagaagattaacataaagcttgttgatgagttgaaggaggtcaaaatggcagcaaacaatctgttgcaggagtatgacaacgagaggaagacacgtgaactcactgaggaggtgtgcaccaagctggtgagggagttagaggaacacaaggccgagattgaaggcctgaagcaagactctctgaaactgcgtgcagaggtggatgaggacagaaaattgctgcagatggctgaggtgtggcgtgaagagcgtgtgcagatgaaacttgttgatgctaaactcacccttgaagccaaatacgaagagttgagcaaactgcaactagatgttgaggcaatcatcgcctctttcagtgacaccaagggagacgataccatagtacaaacagcaaaaaacatcttacagtcaattgaatcaaccagggaacaggagatcaaattcacgtatgaaccaccaccagcatcggatgatatactagcaatcattgaagagttacgccctagtgaagagctcgagacaagggaaactgaaccatgccataagcacaactctccagtacacgaatcagaaaaccagcaagattccccaatgactgacatattcctggagaacccaaccaaactgtactcaaatagaagccattacaatgagagtgacatgggtgattccagcagctgggaaaccataagcaatgaagagatgcaggggtcgagctcttcaaggaatggaagcgaaccttcagtcaacaagatatgtgacaagatttcctggaccagtggggatgattctgaggctgggcagaatgacaacctgagtggtgagttgagcaaggcctacttcgcagacagaaaaccatccaagaagaaagagtcagccatatcaaagttctggaagtcatcccctctgaaaaactgcgaaatcttcaagatagatgtcgtggagatgatgaacaggagatcatcgaacgaaaggctgtcaaatggcatgcattcttcgaacgaaggcgccaatcaagatgcaggactcagctcgccaagtatagggcaatggagctcacctgactcgatgaacagccaactcaaccgcgggttcagaggctgcatggagctggttcagaagcagagcttaaaggcgaagcttctagaagctcggatggagagccagaagatccagctccgccatgtgctcaaccagaaaacctag</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0190700, RefSeq:Os08g0190700