Os08g0193900

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Revision as of 12:50, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0193900| Description = Cyclin-like F-box domain containing protein| Version = NM_001067717.1 GI:115475170 GeneID:4344869| Length = 2819 bp|...")
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Gene Name

Os08g0193900

Description

Cyclin-like F-box domain containing protein

Version

NM_001067717.1 GI:115475170 GeneID:4344869

Length

2819 bp

Definition

Oryza sativa Japonica Group Os08g0193900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:5473999..5476817

Sequence Coding Region

5474375..5475008,5476220..5476776

Expression

GEO Profiles:Os08g0193900

Genome Context

<gbrowseImage1> name=NC_008401:5473999..5476817 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:5473999..5476817 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccttcctccgccgcctctcgccgtcgccgccaccgccaccgccacgccggcaagcccgactacccaccgtcggagctgccggacatcctccgcgtccgcgagctccgccttgcccctcgcgcctcttctctcccaaaccctaaccctcacaaaccccagccccaccccacgattccctcctccaccaccaccaccacctctggacgccgtcgcaaccgccgtggccgtggacgcggccgcgggcgcaaggagggggatgcgagggactgggcgggggggctgccgctggacgcgatcctggccatcttccacaagctcgaccacatcgagatcctgatgggggccgggcaggtgtgccgctcctggcgccgcgccgcgcgcgacgagccccagctctggcggcgcatcgacatgcgcggccacgccgacctctccttcgagctcaacctcttcgggatggcgcaggccgctgtgcgccgcagcgcgggtcagtgcgaggccttctggggcgagtacgccgccgacgaaaaattgctccatttcctcggcgaacgagcaccatctgtgaagagtcttcgtctgatctcttgctatgatatcctcaatgaaggattttcagcagccataaagaagtttccactgcttgaggagcttgagctttcgctttgttcaaatataggtgagagcaatgtgtttgagattgttggcaaagcatgcccacagctgaagcgcttcagatttagtaaagactgcttctacagctttgaagataatgaatacgagatggacgaggaagccctaggtattgcaactatgcatgagctacggtctctgcagctttttgctaataatctcaggaatgaaggtctggcagctatccttgacaactgcccctacctggaatccctcgacattcgtcattgcttcaatgtcaatatggatgacaccctgcgagcaaagtgtgccaggatcaagacactgaggcttccctatgactcaactgatgactatgacttccaagttcagaagcctatctcgcttgctgacttctactctgacagtgatgatgattgtgtttatggtggccccgactatattcttgactcagatgagtacgatgactactgtgacccttaccgctaccttgatggtgtctatgagggcgtcgcgtcagggcgagctcgatga</cdnaseq>

Protein Sequence

<aaseq>MPSSAASRRRRHRHRHAGKPDYPPSELPDILRVRELRLAPRASS LPNPNPHKPQPHPTIPSSTTTTTSGRRRNRRGRGRGRGRKEGDARDWAGGLPLDAILA IFHKLDHIEILMGAGQVCRSWRRAARDEPQLWRRIDMRGHADLSFELNLFGMAQAAVR RSAGQCEAFWGEYAADEKLLHFLGERAPSVKSLRLISCYDILNEGFSAAIKKFPLLEE LELSLCSNIGESNVFEIVGKACPQLKRFRFSKDCFYSFEDNEYEMDEEALGIATMHEL RSLQLFANNLRNEGLAAILDNCPYLESLDIRHCFNVNMDDTLRAKCARIKTLRLPYDS TDDYDFQVQKPISLADFYSDSDDDCVYGGPDYILDSDEYDDYCDPYRYLDGVYEGVAS GRAR</aaseq>

Gene Sequence

<dnaseqindica>1810..2443#42..598#aaaattaaaccgactctttctccgttccgcttcccaccgccatgccttcctccgccgcctctcgccgtcgccgccaccgccaccgccacgccggcaagcccgactacccaccgtcggagctgccggacatcctccgcgtccgcgagctccgccttgcccctcgcgcctcttctctcccaaaccctaaccctcacaaaccccagccccaccccacgattccctcctccaccaccaccaccacctctggacgccgtcgcaaccgccgtggccgtggacgcggccgcgggcgcaaggagggggatgcgagggactgggcgggggggctgccgctggacgcgatcctggccatcttccacaagctcgaccacatcgagatcctgatgggggccgggcaggtgtgccgctcctggcgccgcgccgcgcgcgacgagccccagctctggcggcgcatcgacatgcgcggccacgccgacctctccttcgagctcaacctcttcgggatggcgcaggccgctgtgcgccgcagcgcgggtcagtgcgaggccttctggggcgagtacgccgccgacgaaaaattgctccatttcctcggcgaacggtgagatttctttatccccccaattgcgctccattctgtgatttatctattgagctcgccctttcatttgagtgaccctcggattctggaactaacaatccataatgattaatgaacactggaagactcgtctataattgggcatcatggatgcttctcgtaagtcataacagttcaattggggcaacctagtttgcaccaaatgctccctccgattcatagtataagtcgttttgactttttttactagttaaactttacgtaaagcaaacatattatcaaagtagagactaatttagtgtttaagatgttgctaattttttctataaatttggtcaaacttaataatgcttgaccagaaaaaagttaaaccgacttataatatgaaacagagggaatatatcataaattcgtaattagtcgcattacatttgggtagatatcaagatcagttatagatagtgaacaaatgacagacagctgtttctggttcgatattttcagtgtccctcacgcaagaggtttgattcgtaatgtccacatagttgtcttctgggagtcgcagcagaataattgattaatctcttcatctcgagaataattgatctgcaacattaaatctatacatagtgaaacattagacttgcatttagctagttgtcttcacgagacacaaggtaatatctcacatcagcttatgggctgatgtcttgatgattgaaggtttcctgacacaattaattggtcaagacaaggtacatcttcagtcggattcaaaataatagaatgcaattgtgagagagcttttcaactggagattacgtttcatcatgtgtctagttaaactgaatgaactcacatgaattcttatttggtgctgctgttgaatcattttaaattgcactctagggcaccattacgatacttgaatgttcctcttccacatgcaaaatgtggcgatcaagagaattcctgtcactaaacccttttaaatgctagaactgtgatgatgtgtgattactctctaaagtacctgaatgttttccacatgtcctattaggggaaatgtagttgcagttaactgcaacttctagcaagtctagaaaggatgacacagtactattacgtcttgtacatcattgtcctttttttcttaacgaatgttcttcattctataattgttaattcataccctagtcctatatttacagagcaccatctgtgaagagtcttcgtctgatctcttgctatgatatcctcaatgaaggattttcagcagccataaagaagtttccactgcttgaggagcttgagctttcgctttgttcaaatataggtgagagcaatgtgtttgagattgttggcaaagcatgcccacagctgaagcgcttcagatttagtaaagactgcttctacagctttgaagataatgaatacgagatggacgaggaagccctaggtattgcaactatgcatgagctacggtctctgcagctttttgctaataatctcaggaatgaaggtctggcagctatccttgacaactgcccctacctggaatccctcgacattcgtcattgcttcaatgtcaatatggatgacaccctgcgagcaaagtgtgccaggatcaagacactgaggcttccctatgactcaactgatgactatgacttccaagttcagaagcctatctcgcttgctgacttctactctgacagtgatgatgattgtgtttatggtggccccgactatattcttgactcagatgagtacgatgactactgtgacccttaccgctaccttgatggtgtctatgagggcgtcgcgtcagggcgagctcgatgaagaagatcggatgatgctcaagactatgcgcacgttcctgaaatgaatgccatgcgtatggtggtacttctgcatggttcactggatctgctgctctctggggtgtcaccacttaatggaagattgcttagcaacttggtcagcctatttttctgttcttttgtcttcttagtactctctaccaagttattcacaacggtgtcggtagtgttaaatcttacttggacaggttcctgttccctctgaattcggtatggtggtgtatgactatgtgcctacagccagaacaagataatggcacacttctatcagtatatggtatgttccccggcctaaaaaaaacgctcgcgctatgattatcatttggttattcccc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0193900, RefSeq:Os08g0193900