Os08g0194400

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Revision as of 12:50, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0194400| Description = The start codon is not identified.| Version = NM_001067718.1 GI:115475172 GeneID:4344870| Length = 3515 bp| Definit...")
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Gene Name

Os08g0194400

Description

The start codon is not identified.

Version

NM_001067718.1 GI:115475172 GeneID:4344870

Length

3515 bp

Definition

Oryza sativa Japonica Group Os08g0194400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:5518883..5522397

Sequence Coding Region

5520031..5521269,5522075..5522101

Expression

GEO Profiles:Os08g0194400

Genome Context

<gbrowseImage1> name=NC_008401:5518883..5522397 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:5518883..5522397 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ctccacctggctacagattgttgggaggtgacaaagtttactaatcatcacacgtgtacatctagcggtagaaggaagactaccacaccaaccagcgcctgggttgcttccaaggccatccatatccttgggacagattcaggtatgggccctaaagaactgcaaaaaaggttgcaagaggatcagaaatgcaaaatcaattatgatactgtggctaagggtaggagtttggctatgatccaattgcatggtagttgggaagagaatttccatatgttgtataggtggagggctgcagtcatggagaggtccccaggtagtgttattgagattgacactgttgaggttgatgggaaggtttattttaacagattcttttgtgcatttagtccatgcattactggatttctaactggatgtaggccataccttagtgtagactcaactgccctaaatggtttgtggaaaggacatttagcatctgccatagctatagatggaaacaactggatgtaccctcttgcttttggtttctttgatgctgagactactgataattggacctggtttatgattcaattgcttaaggccataggaaaagtatctcctcttgcaatttgtactgatgcatgcaaaggactagagattgcagtgcaccgagttttcccttgggctgaacatagagaatgttttaaccaccttatgcaaaatctaatcaagaaatatggtggatctgtcttccaagagatgtatcctgcagctagatcatatagggcacaagtgcacgaggagtgtatggatacaattaagaaagcatgcactgatgtggctctctggcttgacacttgccataaattgatatggtacaggagtggcttcaatgctgaaattaaatgtgattatgtcactaacaatcttgcagagtgctttaacaattggatcagagatataaaggccttacctatttgtgagcttgctgacacatgtagggagatgataatgaccctgtggaataggaggagaaggattggaaataaattcacaggtacaattctacctgctaatttgcaccagttgagagctaggactcgagggttaggccacttgtcagttgtgcatgctgacataaccactgctgaggtttgggacaatagtagcagccatgctaggcatgttgtgaggacacatgagcagtcttgtacatgtcaggagtggcaacacactggcaagccttgccgacatgccttggcagtgattacctcctag</cdnaseq>

Protein Sequence

<aaseq>LHLATDCWEVTKFTNHHTCTSSGRRKTTTPTSAWVASKAIHILG TDSGMGPKELQKRLQEDQKCKINYDTVAKGRSLAMIQLHGSWEENFHMLYRWRAAVME RSPGSVIEIDTVEVDGKVYFNRFFCAFSPCITGFLTGCRPYLSVDSTALNGLWKGHLA SAIAIDGNNWMYPLAFGFFDAETTDNWTWFMIQLLKAIGKVSPLAICTDACKGLEIAV HRVFPWAEHRECFNHLMQNLIKKYGGSVFQEMYPAARSYRAQVHEECMDTIKKACTDV ALWLDTCHKLIWYRSGFNAEIKCDYVTNNLAECFNNWIRDIKALPICELADTCREMIM TLWNRRRRIGNKFTGTILPANLHQLRARTRGLGHLSVVHADITTAEVWDNSSSHARHV VRTHEQSCTCQEWQHTGKPCRHALAVITS</aaseq>

Gene Sequence

<dnaseqindica>1129..2367#297..323#gtgtcggtgttgactgaggagggagaagctgggagcggcatcggcagaggcgacaccagcgtgcctccacatcggcttcgtctccggcgccggcccccgcccctgccactcccccacctcgtcctcccccagtcagcgccgccgcccccatccgcctccgccaccgcccccatccgccgccacccccacccctatccgccgcccccatccaccgctgcccctcggtcagctcctcccgccctccactccctcctcccctccctcaatgtgtggttagggtttggctccatggatgactccacctggctacagattgttgggaggtatgcacttctctatttttttcagtgacatgattgcacgattgatttgctggaagtaaggggttagatagatctgactattgtttgcaattatttgcttctttttctctaggctcgaggaggagcctgggagtcaattagtagttgtacaatcgcctactgatgaacctgatagtggtggtagttctcctcctactcaaggagaacagccacagccagaaccacatccaccacctattgttgattgggaaaacctacagattatcgaaccgttagatgaggaaggaagggtaaacatcgtagatgatgaccagttgtacgtgcttttgggtttgagggctgaggatgaagccgccgagaatgctccgagcggcggctgaaactgaacagggtaatggtaacgatggcaatggtgctgaaaatgggaatcacgatgaaaatgaggttgaggttgagcctccggtcgaggacgaggttgccggagaaagaatgatggtgaatgacgcgaataagccatccttggtcaaaggaactgtgtatcccgacatgaaggtctttagattggcggttagacagtttgccatcaatgaggagtttgaactttgggtaaaggcgacagatcgtaaaaaatatgtaggagcatgcaaaggggcaagtgattccccttggcatgtgaatgggcgtagacaggctgacgagcgaaccgtaatggtactttttttcctaatgtcattaatattttcacttctatgttgttttctttattttgctctaatgccatgttttatttgttttaattttgcaggtgacaaagtttactaatcatcacacgtgtacatctagcggtagaaggaagactaccacaccaaccagcgcctgggttgcttccaaggccatccatatccttgggacagattcaggtatgggccctaaagaactgcaaaaaaggttgcaagaggatcagaaatgcaaaatcaattatgatactgtggctaagggtaggagtttggctatgatccaattgcatggtagttgggaagagaatttccatatgttgtataggtggagggctgcagtcatggagaggtccccaggtagtgttattgagattgacactgttgaggttgatgggaaggtttattttaacagattcttttgtgcatttagtccatgcattactggatttctaactggatgtaggccataccttagtgtagactcaactgccctaaatggtttgtggaaaggacatttagcatctgccatagctatagatggaaacaactggatgtaccctcttgcttttggtttctttgatgctgagactactgataattggacctggtttatgattcaattgcttaaggccataggaaaagtatctcctcttgcaatttgtactgatgcatgcaaaggactagagattgcagtgcaccgagttttcccttgggctgaacatagagaatgttttaaccaccttatgcaaaatctaatcaagaaatatggtggatctgtcttccaagagatgtatcctgcagctagatcatatagggcacaagtgcacgaggagtgtatggatacaattaagaaagcatgcactgatgtggctctctggcttgacacttgccataaattgatatggtacaggagtggcttcaatgctgaaattaaatgtgattatgtcactaacaatcttgcagagtgctttaacaattggatcagagatataaaggccttacctatttgtgagcttgctgacacatgtagggagatgataatgaccctgtggaataggaggagaaggattggaaataaattcacaggtacaattctacctgctaatttgcaccagttgagagctaggactcgagggttaggccacttgtcagttgtgcatgctgacataaccactgctgaggtttgggacaatagtagcagccatgctaggcatgttgtgaggacacatgagcagtcttgtacatgtcaggagtggcaacacactggcaagccttgccgacatgccttggcagtgattacctcctagcaaattagggatgtaaagttggagaagtacattaatccctactactctgtggccctattctggaatgcatacaactcaattattgagccactccctgacaaatcacaatggcctaaggtggatttaccttttgttcttggtgcaccccttgcaaaaaggaacctaggaaggtacaggaaactaaggatcaagggttgcttgaaaggtggtggtagcaagcctaaagacaatgccaaagagaaggcaacgattagaggaaaaaggtgtaaaaaatgtggtgagttgggtcatggacaaactagctacaagtgtaagctcaatggtacaaagaagaagccgtaagtctaaatgtcattatttttttctgttgtactacatttgtttttccttgtaaaattaaaatatatatacctcaccttgcaggaaacgaaaggcaagatggaacacaacgaggtatgggccggctcctgctcctaatgctcctgatgtggtttatgcccctgctcctgatgcttatgctgctcctgctgctcatgctgctcctataccatataccccaactaggcctactgtagaaaccattattcaagaaagcccaacaattgtgacaagacggttagtacaaccaactacaattacattaacctagatgtatttttgcttaacaacaacaatttccttgtagccggcttgcaatgttaatggaacaaggagggacaagctcacaaccggcacttgcttcacaagtgacatgtaaaaggagggtgaatattgctgaatcaagctcacagccggctccatcaaagaggacatgtacaaagaagctcacacccaagaaaatgaagcctacttgaatagctcctcctgtatcacaactaatattgtgtgctgtgcatgtgaggcacaattataggaggtattttgtgaaccatggtgcatgtgaaccatgttggtgtatgtgaaccacctttgttgttggtgcatgtgaggcactgttatgtgaggtcttttgtgaaccatggtgcatatgaaccactactatgttgtgaaccatggtgcatgtgaaccactgttatgttgtgaaccattgttatgtgaggtattttgtgaaccacatgctattcaatattatgtcatacatgctgtcc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0194400, RefSeq:Os08g0194400