Os09g0416200

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Revision as of 07:25, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0416200| Description = Similar to Glucose transporter (Fragment)| Version = NM_001069711.1 GI:115479164 GeneID:4347061| Length = 6087 bp| ...")
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Gene Name

Os09g0416200

Description

Similar to Glucose transporter (Fragment)

Version

NM_001069711.1 GI:115479164 GeneID:4347061

Length

6087 bp

Definition

Oryza sativa Japonica Group Os09g0416200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:15540851..15546937

Sequence Coding Region

15540948..15541092,15544992..15545311,15545400..15546026,15546278..15546721

Expression

GEO Profiles:Os09g0416200

Genome Context

<gbrowseImage1> name=NC_008402:15540851..15546937 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:15540851..15546937 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgggaggcggcgtggcggcgctgggggtgaagaaggagcgggcggcggagtacaagggccgcatgacgctcgccgtcggcatggcctgcctcgtcgccgccgtcggcggcgccatcttcggctacgacatcggcatctccgggggagtgacgtccatggatccgttcctcaagaagttcttcccggtggtgttccggaagaagaacgacgacggccagaacaactactgcaagtacgacaaccagggcctctcggcgttcacctcctccctctacctcgccggcctcgtctcctcccttgccgcctcgccggtgacgaggaactacggccgccgcgccagcatcgtctgcggcggcctcagcttcctcgccggcgccacgctcaacgccgccgccgttaacctcgtcatgctcatcctcggccgcatcctgctcggcgtcggcatcggcttcggcaaccaggccgtgccgctgtacctgtcggaaatggcgccggcgcacctccgcggcgcgctgaacatgatgttccagctggcgacgacgctgggcatcttcacggcgaacatgatcaactacgggacgcagcacatcaggccgtgggggtggcggctctcgctggggctcgcggcggcgccggcgctgctgatgaccgtcggcgggctgctcctgccggagacgcccaacagcctgatcgagcgcgggcgcgtcgaggagggccgccgcgtgctggagcgcatccggggcaccgccgacgtggacgccgagttcacggacatggcggaggcgagcgagctcgccaactccatcgagcacccgttccgcaacatcctggagccgcgcaaccggccgcagctggtgatggcggtgtgcatgccggcgttccagatcctgacgggcatcaactccatcctcttctacgcgcccgtgctgttccagagcatgggcttcggcggcagcgcgtcgctctactcctcagtcctcaccggcgccgtcctcttctcctccaccatcatctccatctccaccgtcgaccgcctcggccgccgcaagctcctcatcagcggcggcatccaaatgatcatctgccaggtgatagtggcggtgatcttgggggtgaagttcgggacggacaaggagctgacgaggagctactcgatcgcggtggtggtggtgatctgcctgttcgtgctggcgttcgggtggtcgtgggggccgctggggtggacggtgccgagcgagatcttcccgctggagacgaggtcggcggggcagagcatcacggtggcggtgaacctcttcttcaccttcgtcatcgcgcaggcgttcctgtccctgctctgcgcgctcaagttcggcatcttcctcttcttcgccgggtggatcaccgtcatgaccgtcttcgtccacgtcttcctgccggagaccaagggcgtgcccatcgaggagatggtgctcctatggaggaagcactggttctggaagaaggtcatgcccgacctgccgctcgaggacggcgacagtcatcacaagtga</cdnaseq>

Protein Sequence

<aaseq>MAGGGVAALGVKKERAAEYKGRMTLAVGMACLVAAVGGAIFGYD IGISGGVTSMDPFLKKFFPVVFRKKNDDGQNNYCKYDNQGLSAFTSSLYLAGLVSSLA ASPVTRNYGRRASIVCGGLSFLAGATLNAAAVNLVMLILGRILLGVGIGFGNQAVPLY LSEMAPAHLRGALNMMFQLATTLGIFTANMINYGTQHIRPWGWRLSLGLAAAPALLMT VGGLLLPETPNSLIERGRVEEGRRVLERIRGTADVDAEFTDMAEASELANSIEHPFRN ILEPRNRPQLVMAVCMPAFQILTGINSILFYAPVLFQSMGFGGSASLYSSVLTGAVLF SSTIISISTVDRLGRRKLLISGGIQMIICQVIVAVILGVKFGTDKELTRSYSIAVVVV ICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQAFLSLLCAL KFGIFLFFAGWITVMTVFVHVFLPETKGVPIEEMVLLWRKHWFWKKVMPDLPLEDGDS HHK</aaseq>

Gene Sequence

<dnaseqindica>98..242#4142..4461#4550..5176#5428..5871#actggttcggtgtgagcgagcgagcgagatagccatatcttcgctgtgcgtcgtcgtcgtcgctgcgtggtgaattcttggggaggaggaggacgagatggcgggaggcggcgtggcggcgctgggggtgaagaaggagcgggcggcggagtacaagggccgcatgacgctcgccgtcggcatggcctgcctcgtcgccgccgtcggcggcgccatcttcggctacgacatcggcatctccggtacgtcacgtacaccaccccccatcacctcctagctcctttcgcatcggctgctcgtcagccaccatgggggtcattggagaagacaacaacttctgtgtggctttgttcaacgaacatgtcccgtgtcttatcttgctagctcgctagcggcctagcgctgtacgccgtggcccccgtggattttggagccaagtgcggctcgtgttggcccctttcgctcgccaacacgcatactctcatgccttttcgcagtttgtttgcttctcccggcgattatttgttcgcacatggatggaacgggagcgtaacacctagagtttcgctttgcgagagccttttttttctcctcccgatcaaaaggtggattggttcatagagtagtagttgagattcaatggtgtggcctttctgaactgactagctaggcgaatgattgggcgattcgtgcagcgtaggcaggcattgtgcagtggttttgggtttgcatgatccgttgatgtgatcattcctgtagcagtagaatttggaacaaattcagggaagcagaaaaactgggaaccttttacacacgcaaaagctgcttttgactacactactacacacgtggccggaatccccaccgtatctgtgtcctctttcagttcagagtgatagatatcgcggtgttgtgttttcggtcaagctgtaatcatgtcggagagatttgcttcgtaccagcaagagctgcaaattggaggttagtattagggtgtgtttagtacacgttaaaattaaaagtttgattaaaatttgaacgatgtaacggaaaagttaaaagtttgtgtgtataaaaaattttgatgtgataaaataattggaaatttgaagaataagtttggaactaaactcgttcttaggcactgaattttagcagcagtttcgtcgaaggtactacgcctggtacaaccgcgagaccttagcggccgtactggcctgatgagtggtgctcttggagttcgattcttgtggacgagggcgattgcatcatcatatccaacaattaggcgatcatttcctcgtgtgagaacaaaactatttttttttaagaaaaaaaagagaacaccaggctgaatacaccatccatagaagaccattgacttcaccaataaaagttataaaacagctttgttgctttatatttgcatgactttattatatttaacaaacaatcaactagaccttaggcattgtgaatggtgattgtttattcccaagtagtaggggataccagaccagccggttttctagcgtcaacatattcagatgagacaccatatctcctccacttcacaagacatcgctttagctaggtgtataattatctttttcatgctaatcgaaggaagaatcatttgtatgatgctaatttattcaagtgttctcatttgctgaaatgggccgtctttgatattttcatttagctgtgttttttttgtcagcggtatgacttttagtttgtcttcttgtttattttaatatgttagcatatgtttttcatgtttttccattggtagggaactaccacaatacagtttttatttttttaaaaaaagatagagcagttcatttttttcccaaaaaaacacactcaaacgggcaagttagttgtagccaatcggaccaacttgtcttcctgcccacacgcctttgtgatatgatgtcatgcctgctacagttgctctggtgacgtggactgacaacgtgtcacctcgtcttgccctagccaattacatttgcatgacaagtgggtccatgatgtcagtaacgttgagagaggtaacggaattaattgtagctttgtgaattgtgataattgtactctctaacgttgtagctatataaaattgcttgctaatgttacttgataactttgataactagttgaaaccccacgcgttgcagcgggatattttgttgagattggtggttggctggttgcatttggtaaattgaagttgtataaaaatccctcactattgaattgggccacgatcaaattagatgggcctcctatcgtgaatgtggtgtgcgatggttagactgtgttttttcatctaacggttcaaagaagatcaaatctactgatccaacgactgagaattaacgatgatgtggcacattgaggtttgaactttaggatcttaattgcacttagtgggttataactttatagtaagaaaggatttggttaataaagttacaagttcatcatctatcaatcatttttaactagccaaagtcataacttaatcaaagcggaggaaggagcgaattccacatacactactcgactcttttcccttatttcttgctttgtcatcagtgacgggtcataagttacaacccgtcagagattagtcatcagtgacggtcatgtagttacgacacgtcactgatgactcatctgtgacgggtgacaagttttaacccgtcagagatgacttatataccggtcaaagatgagttatatgtgacgggtgtttcactcgtcataggtgattttgtcatcagtgaccactaatcactgaccaaagccaaacccgtcaaaggtgagggtttaggcccgtcagagatgacctggtccggcgtagtggatagtgcaaggaggcaacgaagcttctcccttccccttcctattccctatcacgccatctcactatggctgggagaagtgatgcctcctttcattaccttcccccgcaaactgagaagaggggaacaaagtcatgtagtgtgctttgacaaggttatgacctaggcgatgcccacgtgttgagttgttctatcatcttctcgcccacgtactcgtatgatgtggtatcttgctacagtagctttggtgacatggactaccaatgtgttgccctgtctcgcctagccaagttctatttgtatggcaggtgggtccatgacgtatagtgttgagagataacaagattgtagttttgtgatagttgtatttgctaacatgagatttactctggtccaacaaaaagtatctcgaggtaccggtacctcacggtattgtagtagtcgggcctcggcacggcctaggcccggccgtgactgggccaagagtagtcgggccggtacgacctgacctacacaccgggccatgccgtgccagcccacgggccgcacatgactcgggccggctcgaaggcacgacagcccatcgtgcttttccacagaataagtctagtttccctccatcttgggctgcgacatatatatagctaaaaagtctattttccctccatcttcttttggctgtgacatataaatagctaaataagtctattttaggtctctattctttggaccatgacattaatatgtctatttttagtccctatactttgtgtgccgggcccggcctgccggcccagcgtgccggtggggaggcctaagcacgtcccggcagttggggcgtgccgtgcttgggccgggccaaaataccgtgccgtgggccaagccttcgggcctcgggccttatggccatctatacgcggtattaaattgtttccaatcgttagatctaacaatgtccatcttgtccagctagatccaacgattggatacaatttagtaccgtgaaataccggtacctcaagatactttttgttaaactgaagtaaatcttccaaattttacaatacaaaatacctcgaggtaaaaaaaattatgctacctcgaggtagcaatcgttggatggtaaaattactcgagaagctatgtttgtactgtcagttctgaagctagagcatcgcattccatcaaagatgctaaaaaaaaatatcatgtttcacctggaaatcacagttgagctccggcgatctgacaaacggttgctgcagggggagtgacgtccatggatccgttcctcaagaagttcttcccggtggtgttccggaagaagaacgacgacggccagaacaactactgcaagtacgacaaccagggcctctcggcgttcacctcctccctctacctcgccggcctcgtctcctcccttgccgcctcgccggtgacgaggaactacggccgccgcgccagcatcgtctgcggcggcctcagcttcctcgccggcgccacgctcaacgccgccgccgttaacctcgtcatgctcatcctcggccgcatcctgctcggcgtcggcatcggcttcggcaaccaggtgcgatatatgcgacatcgatgaaatgaatcgagttcttgtgcttgcgttgctttgatgctaatggtgtttgtgcttggcgtcgcaggccgtgccgctgtacctgtcggaaatggcgccggcgcacctccgcggcgcgctgaacatgatgttccagctggcgacgacgctgggcatcttcacggcgaacatgatcaactacgggacgcagcacatcaggccgtgggggtggcggctctcgctggggctcgcggcggcgccggcgctgctgatgaccgtcggcgggctgctcctgccggagacgcccaacagcctgatcgagcgcgggcgcgtcgaggagggccgccgcgtgctggagcgcatccggggcaccgccgacgtggacgccgagttcacggacatggcggaggcgagcgagctcgccaactccatcgagcacccgttccgcaacatcctggagccgcgcaaccggccgcagctggtgatggcggtgtgcatgccggcgttccagatcctgacgggcatcaactccatcctcttctacgcgcccgtgctgttccagagcatgggcttcggcggcagcgcgtcgctctactcctcagtcctcaccggcgccgtcctcttctcctccaccatcatctccatctccaccgtcgaccgcctcggccgccgcaagctcctcatcagcggcggcatccaaatgatcatctgccaggtattccccgtttcagaagtcaaactactttaaatttaattaagtttatagacaaatatagtattaatttataataccaaattagttttattaaattaataaataaatatattttcttaataaatttgtcttgggttgaaaatgttactatttttttctacaaatttaatcaaatttaaaatagtttgactttaaccaaagtcaaaatgtcttgtatatcctgatgagtttattggaaaacgcaattgcaggtgatagtggcggtgatcttgggggtgaagttcgggacggacaaggagctgacgaggagctactcgatcgcggtggtggtggtgatctgcctgttcgtgctggcgttcgggtggtcgtgggggccgctggggtggacggtgccgagcgagatcttcccgctggagacgaggtcggcggggcagagcatcacggtggcggtgaacctcttcttcaccttcgtcatcgcgcaggcgttcctgtccctgctctgcgcgctcaagttcggcatcttcctcttcttcgccgggtggatcaccgtcatgaccgtcttcgtccacgtcttcctgccggagaccaagggcgtgcccatcgaggagatggtgctcctatggaggaagcactggttctggaagaaggtcatgcccgacctgccgctcgaggacggcgacagtcatcacaagtgaaagaaatgtactctgagatagtatatgggggttacagtagatgagacatgacatgtaggatgaggagattaagattgatcatgtgcggtaatgcattctgtgtgtatgttaattgaagttcatggatcatgatgtctgtttgtcgtggcagagaagagaaatattggaaacacaaaattttatactactcgattattaattgtctgaatcctcgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0416200, RefSeq:Os09g0416200