Os08g0196900

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Revision as of 12:50, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0196900| Description = Cyclin-like F-box domain containing protein| Version = NM_001188492.1 GI:297726114 GeneID:9267378| Length = 4689 bp|...")
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Gene Name

Os08g0196900

Description

Cyclin-like F-box domain containing protein

Version

NM_001188492.1 GI:297726114 GeneID:9267378

Length

4689 bp

Definition

Oryza sativa Japonica Group Os08g0196900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:5601630..5606318

Sequence Coding Region

5601685..5601770,5602789..5602897,5603797..5603926,5604588..5605435

Expression

GEO Profiles:Os08g0196900

Genome Context

<gbrowseImage1> name=NC_008401:5601630..5606318 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:5601630..5606318 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgagttagggatcatcgagcaaggcgtcgactggaggactcgccttggccaagacattcgcgattgcatgataaatgatatattgttcagcctgcaaacgaaattgcaaagtactactacagcattgattgatctccagaaggttgctgtcagaatagaggagaggatccatacgatagctagtgactatggtgattatctacggaggatttgtctgacaagaggtgatttggactcatatgatgtatttttgaatgattgtcaacgtcagcaagcttcaatccgttcatccatcttgctccatcaggagaataagcaaggtgtgctatctaatcaagtagccctaaatgaccacaaggagcactcacacccctacgagaaggatatgatcagcaaactccctaacgatttggtccaacatattatgtcattcttgtcaatgcgagaggctgtgcgcaccagtgttttgtcccattggtgggtcaaccagtggaccttcttgaagtccattcagcttaatatatattggtttcatatggacagagaaaaattcagtagtttccttgacaaactattgctaagccgtgtccaagctgatgctcccatggacacattcgagctaaaatcttttgcaattgaccgcgccaattattggattaatcatgcaatcaagcacaatgctaaagtgcttaaatttgctgaatatggaaaatgggaacctttctacttggatccaaatcttgtggagttaagttctcggtatctagaaactttggagctgactaatgttgctctagatgcgacgatattcaatcagttggccaatgcatgcccagcattgcaaaatatgctgctgacagactgcttactggaggtagaagaaatttcatcaagctcattgaagaatctggatataattgactgctatattctcaaggacctgagcatttgtactcctagtttggtttcattgtgcatcaagaatgaaagaacagacaattcttcgttcagaaactcttacctaatattcgcaacggccattatcattgatgcttcaaatgtcagtagcatggagttgttagctatggatagacaggtactgtactgcttgccctgtagcactgatcctttctcccaaacactctgtacattactatttgtttcatag</cdnaseq>

Protein Sequence

<aaseq>MDELGIIEQGVDWRTRLGQDIRDCMINDILFSLQTKLQSTTTAL IDLQKVAVRIEERIHTIASDYGDYLRRICLTRGDLDSYDVFLNDCQRQQASIRSSILL HQENKQGVLSNQVALNDHKEHSHPYEKDMISKLPNDLVQHIMSFLSMREAVRTSVLSH WWVNQWTFLKSIQLNIYWFHMDREKFSSFLDKLLLSRVQADAPMDTFELKSFAIDRAN YWINHAIKHNAKVLKFAEYGKWEPFYLDPNLVELSSRYLETLELTNVALDATIFNQLA NACPALQNMLLTDCLLEVEEISSSSLKNLDIIDCYILKDLSICTPSLVSLCIKNERTD NSSFRNSYLIFATAIIIDASNVSSMELLAMDRQVLYCLPCSTDPFSQTLCTLLFVS</aaseq>

Gene Sequence

<dnaseqindica>56..141#1160..1268#2168..2297#2959..3806#taagcacttctacctaacgaaaccaaagaggagaagacttgtgttagtcggtgccatggacgagttagggatcatcgagcaaggcgtcgactggaggactcgccttggccaagacattcgcgattgcatgataaatgatatgtgagtgcactctctctctctctctctctctcacccaattcttacttttttttgccatgagaaattgattgcagtgttttgaatcgatgataatttatgaatattggataccctgctcgatgctatagtacttgtttagtgatctaattgaatcatgatatgtatcagtagtcagatctaatttgacgttttctagatccaagagttgtgataattctgtggcttgctatctaaccgtcacgataacctaaaaattggcatcagttttggtataaaaagttgttggtgaggttcaaacctttgtgtattgatcatacccatgtttagaaaatgatcccaattaatgaactaaggttgcatgtcgatagttctttaccaagttacttggccagttctttgcatgactctaagctttatggactagtattttagtactgaaacttcagctgtctgtcgattttttgttatattatttaactagtattttacttcagcgcctattctttccctgttcccaccatgaggaggaggaagagggagagacctggagaaaggataggtgattgtttatatgtatgggtatatgtaattgcttttaatgcaggtgataaaactcacaagaaagatgatcccatatgcatgctcccacatcattttctctttttctttttgcattatatatagtttctccttattattggttatgaatgctctcttgtagactcttagcatgtataacgaattgctaaaatcttgctcacttctggttggacaaattatatttcattatttatgagaatgtatttacaattttgaacatgttactttgccacatgcattgcccaaatagtgaacagtttgcatatgtatttcttgtacgaaacaacccctaaatcctcagttgcctgtttcttttattgcttgttatattagaaccacatttttgaactatttaggttggaagtaccatattgaaacaataaatctctcatgttaccattcaacattctgtctgcagattgttcagcctgcaaacgaaattgcaaagtactactacagcattgattgatctccagaaggttgctgtcagaatagaggagaggatccatacgatagctagtgactatgtatgatagtttcttcttactagattttttttgtaatataatttccttatatattaattatacaatactttatttatctttgatgtgcgcatgatagagtattaatcttaatatagcaacacttctgctgatctgctagttattgcaatgtctcatagctttttgagtaagtacaacttcttgctagaaatcctgaactagttaactagagctataacaattgtgtgaaaccatgggtacgattgtcttgcttcatattatgtaacataatacaatataatgtattggttgcaagatgctctacaccaattttatcgatctaattaaaaatgtttattactccttcatttggtatcgtgcacaagacactaggactgaggctgtattcaattaaagtttttcattttacatagttccaaatatttatgtccccttttcaatttattggcttcaagatgtaaatctctagattaattctagaatatattgattttatcgtgtgcactgattttattgtcatgcaattacttgttttggtggtgttcatatactccctccgtttcacaatgtaagccattctagtatttcccacattcatattaatgttaatgaatctagatatatatatatatatatatatatatatatatatatatatatttgtctagattcattaacattaatatgaatgtgggaaatgttataatgacttacattgtgaaacggaggaagtaccatttaataatatatgcacttattcttgacttgctagattgttgacatgttccttttgctatatatctttgtataatctttttgaaactcatatggttatggttcatcaataggatgttcagttttaaacggaagttctcataatttttttgtcttacacttagggtgattatctacggaggatttgtctgacaagaggtgatttggactcatatgatgtatttttgaatgattgtcaacgtcagcaagcttcaatccgttcatccatcttgctccatcaggagaataagcaaggtgatcaaattgtccaggcaaaaagaaatattaaggggacatcatctagcagtatgttcttgagaatttgaacaccagtgtactcagcagatatattgttttgatctgtttttatggtgcctgtatgacaaaagaattgtttgcttagtaaatattcgagaaaagtggttttttttttacccgagtctacacatgaatctaatgttctgcactagtttatacatgacaatacatcatacatgcaaagacaattttcaacgtctacaacctgatcccgtttgattaaacaagcattgtaatgtttttcttctttagacattggaaatttgggtgcaaaacgatgaatattagttattcttatgcaacggatgattcaagtgtgtacattgcctcctaattatgtgccccctttttttttcaaaagataaattggagctagcccaccgtactgacttatatcatctatgtaaaatgaattacagatggcaatctctctgtgaaactagagttaagcaaagcataaaaactacaaatttgttgtaagttgtttaggtggttctccaagatcaagtatcaacactaaggagcatgtgttagagtcaatgccagtaattgttctccactaaaataatgtaacacaatatccacttttatattgcaggtgtgctatctaatcaagtagccctaaatgaccacaaggagcactcacacccctacgagaaggatatgatcagcaaactccctaacgatttggtccaacatattatgtcattcttgtcaatgcgagaggctgtgcgcaccagtgttttgtcccattggtgggtcaaccagtggaccttcttgaagtccattcagcttaatatatattggtttcatatggacagagaaaaattcagtagtttccttgacaaactattgctaagccgtgtccaagctgatgctcccatggacacattcgagctaaaatcttttgcaattgaccgcgccaattattggattaatcatgcaatcaagcacaatgctaaagtgcttaaatttgctgaatatggaaaatgggaacctttctacttggatccaaatcttgtggagttaagttctcggtatctagaaactttggagctgactaatgttgctctagatgcgacgatattcaatcagttggccaatgcatgcccagcattgcaaaatatgctgctgacagactgcttactggaggtagaagaaatttcatcaagctcattgaagaatctggatataattgactgctatattctcaaggacctgagcatttgtactcctagtttggtttcattgtgcatcaagaatgaaagaacagacaattcttcgttcagaaactcttacctaatattcgcaacggccattatcattgatgcttcaaatgtcagtagcatggagttgttagctatggatagacaggtactgtactgcttgccctgtagcactgatcctttctcccaaacactctgtacattactatttgtttcatagttttactatttgtttagtatatgcatttgtacattactatcatacattttcatgtgaatatatttatgcaaatgaattttctttcataacaaggacacaacataaaacattcattttgcacggtatgtatatacccgatttcaaatcgacacatacttctctgaccaccttttttaccacaattgttttggatttcatagcattaacagtatttaagacttaagacatgtttttttcctgtgtacatatgaagttcacattcgtggagaaagacgggggcgagccaatgttcaagaatctcagaaacttgagcctaggtctatggtgcattaacaacatgttttcgcctctacgtcgattcgtccggcattcgcctatgctgaggatggtgactctgaggatcagtccggtcagtgccatccattgcattgcatcatccccatgcttcctgtgtccagcttctttttcttttttttttggttactatcattgttgaaagcctagagctctaatgatgctgcaaacctttcaacttcagctggattggaagtcccatctcacgaaggaacatcaggagatgctgatcagcattcgtgatcgtcgtggcctgattctttatatcgattggtattgaaggccaagggcttctgcggtgctccaatggtgaataaaattgctgccaaattaagctggttgctgaaacattgagaccaatttaagtttcttttcgttttaatcgcagtggatcaaacttgttgcagtaataattacctgttacttgactgcatgtgtcagcctggagtctggatgttgtctttgatgtggtgtcattgttacttatactgtttcattatatggatgaaccaatgagtctttaagaacc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0196900, RefSeq:Os08g0196900