Os08g0197050

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Revision as of 12:50, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0197050| Description = Cyclin-like F-box domain containing protein| Version = NM_001188493.1 GI:297726116 GeneID:9271664| Length = 3265 bp|...")
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Gene Name

Os08g0197050

Description

Cyclin-like F-box domain containing protein

Version

NM_001188493.1 GI:297726116 GeneID:9271664

Length

3265 bp

Definition

Oryza sativa Japonica Group Os08g0197050, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:5612328..5615592

Sequence Coding Region

5612330..5612423,5612564..5613876

Expression

GEO Profiles:Os08g0197050

Genome Context

<gbrowseImage1> name=NC_008401:5612328..5615592 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:5612328..5615592 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ctcccgaagcgcgaagccgttctatcggaactcgaaagcagcgagagctcttggcgcggcccatcgatttcgccaagaaatccccaatctctccgcaacctgttcgacggaatgcatcagggagcggcgcggcaggcggggcagtccggcggtggcggtggcggtggcggtggcgcggaccgcctgagcgcgctcccggacgcggcgctcttccggatcgtgtcgcacctgacggcgcggcaggcggtgcgcacgagcgtgctctccaagcggtggcgccacgtgtgggcttccgtgccgcgcgtcgacatccgccacccctgcgcctgcgacgagcgcgccgaccaggagaggttcggcgacttcgtcaccaccatgctcctcaaccgccgcccatttgcgcccatcaaggcgctccggctgtggtggagccacgatggcgacgccgagacgtggatcgctcatgctgtcaggcgtggggccgaagaaatcgatttctccgcgaggcatcaccaagatgatccgaagccggagctagagtacacaagcttcatttctcccaagatcaagatcttgaagctgacgactttcgggatggacatcaaggccatcacgcatatctgttctaggtgcacttctctggaagagttagagctcaaggattttcgacgacttgatggacagattcgatcggcctcgctgaagcagttgtctatcatcaactgctttatctctgttgcctttttggttgatgctccgaaccttatctcgctctgcttcatcagacctctcagctttgagagaaccaaggaatccatttgctcgtctgataatcgtaggtggccatccccagtatggaaggatgacaacgatggatttgatcatggtgatatctttgcaattgctagtggcgaacactttgatgataagagagagaatgaatctgatcaagactatggttttgatgatggctctgatgataacatagccagtgaatctgatcatgatgatgatggtcccccttccccatattctgtttcctacgatggtgacaatgaatgcgagtcttatgaacccggcaataaggaggagtctgatcgtacagtggcctatggtgagattgcagatgagtactccagtaatggtgatcccggtgatgaatatcggggaaattatgtgaaccatgattctgcgaattacggtagagctaataagtttggaaatttgaacttcccagtgaagtcaattgtggatgcgtcagctcatgaaggagaggtaatatttaatcaccttgctgatactatcgtgttctcaattttgtatgctttttctaaacttctttgcaacaaaatttgcagtatggaagaggaactagttaccggtgtaataacagaaatgtcttcataa</cdnaseq>

Protein Sequence

<aaseq>LPKREAVLSELESSESSWRGPSISPRNPQSLRNLFDGMHQGAAR QAGQSGGGGGGGGGADRLSALPDAALFRIVSHLTARQAVRTSVLSKRWRHVWASVPRV DIRHPCACDERADQERFGDFVTTMLLNRRPFAPIKALRLWWSHDGDAETWIAHAVRRG AEEIDFSARHHQDDPKPELEYTSFISPKIKILKLTTFGMDIKAITHICSRCTSLEELE LKDFRRLDGQIRSASLKQLSIINCFISVAFLVDAPNLISLCFIRPLSFERTKESICSS DNRRWPSPVWKDDNDGFDHGDIFAIASGEHFDDKRENESDQDYGFDDGSDDNIASESD HDDDGPPSPYSVSYDGDNECESYEPGNKEESDRTVAYGEIADEYSSNGDPGDEYRGNY VNHDSANYGRANKFGNLNFPVKSIVDASAHEGEVIFNHLADTIVFSILYAFSKLLCNK ICSMEEELVTGVITEMSS</aaseq>

Gene Sequence

<dnaseqindica>3..96#237..1549#gtctcccgaagcgcgaagccgttctatcggaactcgaaagcagcgagagctcttggcgcggcccatcgatttcgccaagaaatccccaatctctccgtgagttcttctcctcctcccctcgatcgcgtgctccgatgtgtttcttgcgattctcggtggttttccgctcgtcgtagctgagcagaaacgttcgttgtgggttcttttgattcggggagtcgacgtgtccattgcaggcaacctgttcgacggaatgcatcagggagcggcgcggcaggcggggcagtccggcggtggcggtggcggtggcggtggcgcggaccgcctgagcgcgctcccggacgcggcgctcttccggatcgtgtcgcacctgacggcgcggcaggcggtgcgcacgagcgtgctctccaagcggtggcgccacgtgtgggcttccgtgccgcgcgtcgacatccgccacccctgcgcctgcgacgagcgcgccgaccaggagaggttcggcgacttcgtcaccaccatgctcctcaaccgccgcccatttgcgcccatcaaggcgctccggctgtggtggagccacgatggcgacgccgagacgtggatcgctcatgctgtcaggcgtggggccgaagaaatcgatttctccgcgaggcatcaccaagatgatccgaagccggagctagagtacacaagcttcatttctcccaagatcaagatcttgaagctgacgactttcgggatggacatcaaggccatcacgcatatctgttctaggtgcacttctctggaagagttagagctcaaggattttcgacgacttgatggacagattcgatcggcctcgctgaagcagttgtctatcatcaactgctttatctctgttgcctttttggttgatgctccgaaccttatctcgctctgcttcatcagacctctcagctttgagagaaccaaggaatccatttgctcgtctgataatcgtaggtggccatccccagtatggaaggatgacaacgatggatttgatcatggtgatatctttgcaattgctagtggcgaacactttgatgataagagagagaatgaatctgatcaagactatggttttgatgatggctctgatgataacatagccagtgaatctgatcatgatgatgatggtcccccttccccatattctgtttcctacgatggtgacaatgaatgcgagtcttatgaacccggcaataaggaggagtctgatcgtacagtggcctatggtgagattgcagatgagtactccagtaatggtgatcccggtgatgaatatcggggaaattatgtgaaccatgattctgcgaattacggtagagctaataagtttggaaatttgaacttcccagtgaagtcaattgtggatgcgtcagctcatgaaggagaggtaatatttaatcaccttgctgatactatcgtgttctcaattttgtatgctttttctaaacttctttgcaacaaaatttgcagtatggaagaggaactagttaccggtgtaataacagaaatgtcttcataaacttaatgtgtagaagagtgttttgtcagttctgttgatgacattctcaaatcagtatggctagctcagttacaaagagtactagtattgctgaagttatagtattgccactcaaagaaatgaaaatgctaccgttgtagcttgctgatgacaatattaagaagttccttactaattgagcagccaaatgaattggtgtcacccagatgacattgtatatctgttaggtactaccgcaagttatcatgttcctacctgatctactagtgtgcaagtattcaatcaccttctctttatggtgttgaactttgaatattatcttatggtcgacttgttactgtgccttaactagaactctcaattagcattttttttttacttttacctgtcgatttttctgtttgccttggccagaagaagtttcttttatcatataagaccatgctagcacattagttactcgtttctagataatggaagtacaactcagcacttcagcgtagtcactaccaatatctcacaaatatttcacattgacttgagagaaaccttggattcatttcataagtcataacaggagaaatttaggttgccgttctagaacatttgttgctagtgcaacatgtttactaactgactgctaaaagtggcagtaactttcaatgtataggttggtattcccgtgatgattgcaaacctgtgatttctttttacctgctcatctaccacttttgattttatcaatgcacatttcgttgttctctggtaggagaaatgtttttggtcactgaatcattttgatatctatggaaatgtgtacttgtgcagctgcttctgaggaggctattggaaaatttccccatgtttaataacctggatactctgtcccttggtgaatggtgtatggttcctgacttcagtgctttgtcaaccatacttacgaaatcaccaaatgtaaaaaggctttatcttcaccttgacgtggtacgtgtactcgtatgcttgttacatgtttgcttaaagtgtttaagcatgttattaatcccttgaaccatcgttttacaaaagattcacagaagaagaaggtgcatcgatcccagtggaggatcattttcttgcaacaacctggagaaggttaagatcacatgttgtaaagatgatgtaatggtccatatgctggctccattcctccaagataacggtgtatcgcctgagaagatttttgttcgtcgcacttccagcccacataatggcaaggaaggcagaggtagtaactccagtgcgaaacggaaggcgcaaggcgaagttgcgaggctagcagtgaaacagaggagggcgcgaaacagtagaagcccggagtgaggggaacatgtttaaaatgctgaggaatccagtgctgagtttacattgcagttagcagtagaattcttcactggatgtgtatatgcatcaattctagtacaggtaactttggttacatgcagaattaggcatccgttggtgttgcatgaaaatagatgattggtcaatgttcagtgacttggaatcctgtgaattgctatgtcatgtttgatgtattgagtaattggcagtggctacatttgtctttgtgatttcacggtctgatcatctggcctaattagttttgtcatggtgtcatgtttgcaactatgtttatactccccgtaaaagaagaaacatgttcgtactgtagcc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0197050, RefSeq:Os08g0197050