Os08g0197200

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Revision as of 12:50, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0197200| Description = Cyclin-like F-box domain containing protein| Version = NM_001067725.1 GI:115475186 GeneID:4344878| Length = 2961 bp|...")
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Gene Name

Os08g0197200

Description

Cyclin-like F-box domain containing protein

Version

NM_001067725.1 GI:115475186 GeneID:4344878

Length

2961 bp

Definition

Oryza sativa Japonica Group Os08g0197200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:5622666..5625626

Sequence Coding Region

5622925..5623980,5624927..5625082,5625163..5625405

Expression

GEO Profiles:Os08g0197200

Genome Context

<gbrowseImage1> name=NC_008401:5622666..5625626 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:5622666..5625626 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagcagggagccgcggggcaggcgccgcggcgcgacgacggggaggcggcggggccttccggtggtggcgggggcggtggtgaggaccgcctcagcgcgctcccggacgcggtgctcggcaggatcgtgtcgcacctgaaggcgtggcaggcggtgcgcacgagcgtgctctccaagcggtggcgcgacgtgtgggcgtccgcgccgcgcgtcgacatccgccacccctgcgcctgcaacgagcgcgccgaccaggagaggttccacggcttcgtcgacaccctgctcctcaggcgccgcccgttcgctcccatcaaggcgctccggctgtgctggagccacgacggcgacgccaacaactggatcgctcatgccgtcaggcgcggggccgaagaaatcgaactctccacgaggcatcaccaaggttctctggaaccggagccggagttcacgagcttcatttctcccaagatcaagatcttgaagctgatgcgtgtcggcatggacatcaggtctatcacgcaaatctgctctaggtgcacttctttggaagaattagagctcgaggatgttcgcctacttgaagggcagattcaatcggcctcgctgaagcgcttgtctatcatcaaatgctatatcgatgatggctttttggttgatgctccgaaccttgtctcgctctgcttcatcagacctctcggcattgagagaaaggggggatccaattcctcgtctgatagactttggtggccagtgtggctgaatgacgacgatggatatgatcatgatgatgatttctttgcaaatgctagtgctgtacaatctgacgataagagaggcagtaaatctgatcaagatgatcttgaaggttgcaatgatgatgattgtactgtggcctatgatgagattgcagatgagtactccagtaatggtggtcctggtgatgaacatggaggatattctgagagcgatgattctacaatttgtggtccctatggtttatttaatgttcttgtaaagacatctctgatcatgatagcccgggaaggagagctgcttctgaggagggaattggaaaatttccccatgttcattaacctgaatactctgtcccttggtgaatggtgtatggttcctgacttcagtgctttgtcaaccatacttgagaaatcacctaatgtagaaaggctttatattcaccttgacatggtccacagaggaagaggggacatcgatccaagtggaggatcatttgcttgcaacaacctgaagaaggttaagatcacatgttgtgaagatgatgtaatggtccataagctggcggaattcctcgaagctaacggcctacagcgtcagaggatttttgttcgtcgcacatccagaactcgtagagactccagggcgaaacagaaagagcaagaggatcatttgaggctcgcaaagaagtggtga</cdnaseq>

Protein Sequence

<aaseq>MQQGAAGQAPRRDDGEAAGPSGGGGGGGEDRLSALPDAVLGRIV SHLKAWQAVRTSVLSKRWRDVWASAPRVDIRHPCACNERADQERFHGFVDTLLLRRRP FAPIKALRLCWSHDGDANNWIAHAVRRGAEEIELSTRHHQGSLEPEPEFTSFISPKIK ILKLMRVGMDIRSITQICSRCTSLEELELEDVRLLEGQIQSASLKRLSIIKCYIDDGF LVDAPNLVSLCFIRPLGIERKGGSNSSSDRLWWPVWLNDDDGYDHDDDFFANASAVQS DDKRGSKSDQDDLEGCNDDDCTVAYDEIADEYSSNGGPGDEHGGYSESDDSTICGPYG LFNVLVKTSLIMIAREGELLLRRELENFPMFINLNTLSLGEWCMVPDFSALSTILEKS PNVERLYIHLDMVHRGRGDIDPSGGSFACNNLKKVKITCCEDDVMVHKLAEFLEANGL QRQRIFVRRTSRTRRDSRAKQKEQEDHLRLAKKW</aaseq>

Gene Sequence

<dnaseqindica>260..1315#2262..2417#2498..2740#ctcgaagccgttctaccacctgctggtgctccaaagttgaaagtcgaaagcagcgagagctcttggcgcccatcgattcgccaagaaatccccaatctctccgtgagttcttctccccctcccctcgatcacctgctccgatgcttttcttgcgattcttggttgccgattcgccgttgttggttgatttcctctttggttctggagtttgttgatgtggttggtcgccgtgtccattgcaggcaacccgttcgacggaatgcagcagggagccgcggggcaggcgccgcggcgcgacgacggggaggcggcggggccttccggtggtggcgggggcggtggtgaggaccgcctcagcgcgctcccggacgcggtgctcggcaggatcgtgtcgcacctgaaggcgtggcaggcggtgcgcacgagcgtgctctccaagcggtggcgcgacgtgtgggcgtccgcgccgcgcgtcgacatccgccacccctgcgcctgcaacgagcgcgccgaccaggagaggttccacggcttcgtcgacaccctgctcctcaggcgccgcccgttcgctcccatcaaggcgctccggctgtgctggagccacgacggcgacgccaacaactggatcgctcatgccgtcaggcgcggggccgaagaaatcgaactctccacgaggcatcaccaaggttctctggaaccggagccggagttcacgagcttcatttctcccaagatcaagatcttgaagctgatgcgtgtcggcatggacatcaggtctatcacgcaaatctgctctaggtgcacttctttggaagaattagagctcgaggatgttcgcctacttgaagggcagattcaatcggcctcgctgaagcgcttgtctatcatcaaatgctatatcgatgatggctttttggttgatgctccgaaccttgtctcgctctgcttcatcagacctctcggcattgagagaaaggggggatccaattcctcgtctgatagactttggtggccagtgtggctgaatgacgacgatggatatgatcatgatgatgatttctttgcaaatgctagtgctgtacaatctgacgataagagaggcagtaaatctgatcaagatgatcttgaaggttgcaatgatgatgattgtactgtggcctatgatgagattgcagatgagtactccagtaatggtggtcctggtgatgaacatggaggatattctgagagcgatgattctacaatttgtggtccctatggtttatttaatgttcttgtaaagacatctctgatcatgatagcccgggaaggagaggtagtgtttaatcaccctgctacgtttgatcatgtcattctacatattatgttctctcttatttgtatgctttctttttccgggatgtacgcattacttttgcacaattctttgcaagcaaatatgtcactgtatgagaaaggaactagttaccggtgcattaacagaactgtcttcataaacttaatgtgtagaagaaagtttggtcagttctgcttgttacgagatttctcaaattagtatggttaactcagtttatagtacaaagagtgctcatattgctaacattacagtactgtcactcaaacaacgtccttacaaaatgcttccgttgtagcttgctgatgacaatattaagaagtttcttactaattgatcagccaaatgaattggtgtcactcaggtgacattgtacatcttttaggtactactgcaagttcttatgttcctacctgatcttctagtgcactagtattcaatcatttctctctatggtgtattgaacttcgaatttatctcatggctgacttgttaccgtgcctttactagaactcgcaattagcagttcttttttatttgtctctggccaaaggaagttatatatttgtctctgaccaagctagtatgttagttacattttttttacataatggaagtacatctcacaaatatttcacaactcacttgagcaaaaccttgggttcatctcataccaggacaaattttggttgccattctggaacatttgttggtagtgcaacatgtgtactaactgattactaaaagtggcagaactttcaaggctagtttaatattcatctgatgattgcaaacctgtgatttttttcctataatcttgtccatgtaccacttttgatttgtcaatgcacatatcttttgatttatttgggtcactgaatcatttggtatctatggaaatgtgcagctgcttctgaggagggaattggaaaatttccccatgttcattaacctgaatactctgtcccttggtgaatggtgtatggttcctgacttcagtgctttgtcaaccatacttgagaaatcacctaatgtagaaaggctttatattcaccttgacatggtatgtgtactcacatgcttgaaaaaaagtttgcttggagtgtttaagtatgttattgatcccttaaatcattgttttaggtccacagaggaagaggggacatcgatccaagtggaggatcatttgcttgcaacaacctgaagaaggttaagatcacatgttgtgaagatgatgtaatggtccataagctggcggaattcctcgaagctaacggcctacagcgtcagaggatttttgttcgtcgcacatccagaactcgtagagactccagggcgaaacagaaagagcaagaggatcatttgaggctcgcaaagaagtggtgaacggtgtgaaatagtagaagcctggagtgagggaaaggtgcctaaaatgccgaaagccggtgcgggcgttgaggaatccagtgctgagtttacattgcagttaacactaggattgtctactggatgtgtatatgcatcagttttagtacaggtacctgggtatgtgcaagactttgcattcgttggtgttgcatgaaaatagatggctgatcagaatgttt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0197200, RefSeq:Os08g0197200