Os09g0416400

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Revision as of 07:25, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0416400| Description = Conserved hypothetical protein| Version = NM_001069712.2 GI:297609476 GeneID:4347062| Length = 5211 bp| Definition ...")
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Gene Name

Os09g0416400

Description

Conserved hypothetical protein

Version

NM_001069712.2 GI:297609476 GeneID:4347062

Length

5211 bp

Definition

Oryza sativa Japonica Group Os09g0416400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:15549886..15555096

Sequence Coding Region

15550104..15550184,15550327..15550525,15553634..15553749

Expression

GEO Profiles:Os09g0416400

Genome Context

<gbrowseImage1> name=NC_008402:15549886..15555096 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:15549886..15555096 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgactcccgtgaaccaggatagcatcactccggtgaacacgtgggaggaggatgaactggagctggaagaagaggagggtttgttatgcaagcgcaaaagggctaagttttcagattccactgtccgacagcaacaggggattgaagctgcagccatggatatggtgatggaggaggctgctgctctttcactcggagtttccgctagcaaggagcctgtgcatgtggccactggtcgtgtcgagcagagcaattgtggagcaaagcatgccaatgggactacagataatgaaccagcaaggttgagactgcataaaatctgctctgcaactcactggaaggaaccatcatatgactttgaagaacaagggccttcccatcttaaactgtaa</cdnaseq>

Protein Sequence

<aaseq>MATPVNQDSITPVNTWEEDELELEEEEGLLCKRKRAKFSDSTVR QQQGIEAAAMDMVMEEAAALSLGVSASKEPVHVATGRVEQSNCGAKHANGTTDNEPAR LRLHKICSATHWKEPSYDFEEQGPSHLKL</aaseq>

Gene Sequence

<dnaseqindica>219..299#442..640#3749..3864#ggctgctcgtcttcctccgccgcccatccgaagagttgcccacgccgcggcggcgccggcgagtcggcgacggcgacgagcaagcccgggccggagagcgctgctgccgcctccagacgaggtatctgcctcaacccgcctgcttccgtcactccatcgcccggcccccttccgactgctcaggtggttttgctctgcattgttagggttttctggtcatggcgactcccgtgaaccaggatagcatcactccggtgaacacgtgggaggaggatgaactggagctggaagaagaggaggtaacagcaagcagatgtgaccccacaggccgcagccatggcgttgtttagagtggcattgttgtttgggttttctttattattttcttttacttccttattaggatcgaatcagtgtctaaattcttcctgtttctgcaagggtttgttatgcaagcgcaaaagggctaagttttcagattccactgtccgacagcaacaggggattgaagctgcagccatggatatggtgatggaggaggctgctgctctttcactcggagtttccgctagcaaggagcctgtgcatgtggccactggtcgtgtcgagcagagcaattgtggagcaaagcatgccaatggtatctgaaatttattctttcggaacagttcgctaatctgactgtgatttacagtatagtgctaatatttgaagttagggtgtaggatatttgcagccccttaattaggatatagcaccttgtaggatgtgaaacacgccaggaaatagcctttgctcgtctatgaatgctgattatttgttatgtaacactttacagatatctgatctgttgaattagtttattagagaagtcaagctggacacggatttgagaattgacataaagacagattagcatggtactagaacaatgtagtcacttagtcatggtctcctacagattaaccaaccaaatccaaacagttaaggatagtttgttagatcacaaagacatccttgttcatgtaatatatgagtttaaatgacctctatacataatttagacaagtgtgaacctgttcaaactgtattttactctgaatttgatataatatgcatgcatgttagaatactgaaatgccatatgcatggatctatgagaaaggataacgcagaaggtcacaagatgctaactcatcatagcatggctaaattgtccttcacctgcccccccccacccccctcctccttttttttttctcttttggtgtgtttgttaccctgtactaacttttcggaaacctaagtcacgtcaaatgtggaactatgccacgttcttcatcccaggaacacgggaaaaatctcgtccctgccttgttaaaccctaataaaagtagtgtccctcgatcccattccacgaaccattgaccttagaactttggtgacattgcttgaaactttccatattcagatatatgcaagttgctgcattaactactaaccttatgtatgagttgtgtttgtaattaggaatttttttattactcccaagtaattctagcccatccattctagaacatcctatggttgttatgactattacaatataggaggtactaatgtcattatttatcacaaagggaaataagacttttggcaacatattatagaaagaaataaatgctaaaactatgctgcatgcatgctggctgtgtatatccgtctgtggttatagagtccagatttctatccattatccaaaaaattgttgcacgcatgcattcatgcaatcaatcctcatacacttttttccccttaggatttaatcagtgtctcaattcttcccctttctgcaagggtttgttatgcaatgctaaaatcattccatttaatatttcccttactatagaatcacagcatatttttaaaaatatattttaatcaccataaaatgatattcccttgtatcaaataataaccgagaaacatttcaggaaattaaatttagtataatataaatttgattacttcaaacatccagataatttacagcatattagaaaacagagacactgaataaacttgttgagaataaatttttggcaaagcaaacttgagtttccaacaatataacttagacccaaccgatcaaattcaaacattatatcaacgtacataaaacttaaacatcaatgtcataattggatatttaactttgaatgtgaaaaggggtaagttttccgattccatagtccgacagcaacatgggattgaagccgcagccatggagaaggtgatggaggaggctgctgccctttcactcggagtttccgctagcaattgcaaggagcctgtacatggggccaatggtcgtgtggagcagagcaatggtggagcaaagcatgccaatggcatgtgaaatttactaatctagggctggacaaaaagttcgttagctcgctcgacttggctctttgcgtttttgtaatgagccgagctgacgtttcagctcgttagagataacgagccagctcgctcgagccagagcagctcacgaaccaaacgagccaagctagcaacgaaagccctgctagtggcagtccccagcatagcagcccaaaccatcccagcaaagtccatctggccatctctaggagtatctttgagtcataaccctaaaactctacaatcctagctatcctctccccacgctgccaccaacttctctcacgggctcccatcgacgacaatgctgatgcatgggcccaatggcaacggcgctgatgcatcacgcatggactgcagccgcatcatttgaagtaaactataaattaatatttttaatatatattttaatcaccataaaccaatataaccttatatcaaataataaccgagaaatattccagaaaattaaatttagtataatataaatttgattacttcaaagatccagataatttacagtatattagaaaacagaaataccaagtaaacttgttgagaatcaatttttggcaaagcaaacttgactttccaacaatataacttagacccaaccgatcaaattcaaacattatatcaacttacataaaacttaaacatcaatgtcataattggataattaattttgaatgtgttttctatgttgcatgcatgctggctgtctatatccgtctgtggatatagaggctggatttctttccattatcttaaaaaaaaatgttgcatacatgcatccatgcaattaatcctcgtacacttcttgggcaccttaaaacaagtcaattaaaatggattaaactggcaattaatccttgtacactttttacctcctagggaaaagcatgggtgacttctaggagagcctccaattaatttagagatcgatctaacagtttgcttttgcagatccttgatacatggtatactttattagattgaagccactaagtatacattcttgagaaataacatccaaactccaaacacatggatttctggctgatcaacactactgtattgtaaatggcaatccaattttctccatgcttgaaatcaagaatcctgaactctggatcaaaatgtgatctttcataaataaaccagggcatagaacaattggttatggcatttaaaatgaggagacatcagtagatcatatagattattgttgtatcttacatgatacaatatttaaaggaaagccgctgatttcaaaagctaataattttgttgaaatttgcagggactacagataatgaaccagcaaggttgagactgcataaaatctgctctgcaactcactggaaggaaccatcatatgactttgaagaacaagggccttcccatcttaaactgtaagtttttctattaactggtgaattgtcaatgttttattttatgcatcactgtgaattacattactgtgagtgtgattagccaaccatatcagcctatcctaggtaaagcaactagaccttaccattgtatgtctcttatagagttctctgagtacttgtcattattaatcttttcttccatcttgttaacacgagtaaaagatgataacacgattacgagtctattagttcataatggcactgtacttcatagaagttttttttcatggtttggttaagaaaccgatgaattccacaagtcaaaactggaacatgtccattggcaaggggcagcattaagcacatacctagtagtactccagtatttccaatttatctctgcaattcacaacggtgaactggtgtttttaccttagatgtgaaaaaagaaagcgtcaaaccaccaatctgtttcagagctcaaccagctatagtattttcactctttaacatggtatattttgctgagagataggtgtgcttcatgctgggttatgcatcatactcaacatcctacacactttatattattttggtagcatgaaaaatagcaaattaccagaatatcttatttctggattgctgtcccatctatgactgaaatccagtgatgactgaaatctggtgagtgtccaccatttgacgtttttagctattttgagattcattcatgacccttcctaatatatcagtgagctcgaatgttatctatcagaatcaagtggattctttcattatcgtttacctttaacccttgtaagtatttttgtccattgatcgcttgcgtatgctaatacaatggctagactaattttaacacttaatgtgggcattgctaatgctgtgaaaactatgcaggttcacttgcaaggtgactatccatgtggatacattcacaaccaccattgtggagtgcatcagtgaacctaatcgttccaagaaagctgcccaggaacatgctgctcaaggtgcattgtggtacctcaagatctttggacacgccaattaatctcagacgctccaggtagtaacttaaacgacttccaggtagcacagtgctaacccagtgttccttttccactcgcgtgtatttcatccactacaggggcagtgttctttcttaatccaaggttggatcagttgctccatgtacatatccgaaattcttgctctacgtaggtgtcatctatctagtccaggagagttctatgttatgtcgtacatggccacatggggtccctttttgtatatactgctactacgtatttaccacttgggcagagccagaaaggcctttctactatgctct</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0416400, RefSeq:Os09g0416400