Os08g0198000

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Revision as of 12:50, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0198000| Description = DNA-binding WRKY domain containing protein| Version = NM_001067731.1 GI:115475198 GeneID:4344884| Length = 5829 bp| ...")
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Gene Name

Os08g0198000

Description

DNA-binding WRKY domain containing protein

Version

NM_001067731.1 GI:115475198 GeneID:4344884

Length

5829 bp

Definition

Oryza sativa Japonica Group Os08g0198000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:5662581..5668409

Sequence Coding Region

5662581..5662609,5662710..5664598,5667656..5667748,5667835..5668409

Expression

GEO Profiles:Os08g0198000

Genome Context

<gbrowseImage1> name=NC_008401:5662581..5668409 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:5662581..5668409 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagaaccagtcaggtcaagctcaggacggcatggccgatcaaagatttcgcagctggctgacagaacaatttaacacgcagccgtatgccggctcttcttccaacttagcagtaatgcagatgcaggttctgccatctcacacaacttctcagatcatagacacacacccacctgaatatgatggctacaactggagaatttgtgggcagaaagtagttcagggtgggtgccatcagaaattctactatgaatgttctcaagcaaactgcggtgccgagaaatccgtgacacgctccgcagatggacagatcaagaaaacagtatgtaagggcagtcacaaccatccactctcatcagaaagggtgtttggagaaggttcagctacgctggatgcaatccctgttggtgagatattacaggcagcaggggttatcaggccttcagttgcaatgcctatgaatgaggaggaagatgagctacaatctggtttgggtgacagcgaggaagatgatgctaatgaagcaagagttgatggtgacggtgctgctgctgatgccaatgcaatagaaagacatggtgcagctcaagatatcaccgctcaaactgcaactgaggttgatgttacgggtaacggctgtcagcaacgtaagaattattgccgaagtgaaaatagaagatcaaagtccaaggtatggaaggaatttacagctgtgttaagtgttggaaaaattcaaagtgcagaatgtaagcattgtaaaaagtgccttagtggaaaaagttctggaggaacaagccacctgcgtcgacatctaaagatatgtcctggacaatgcagagatactaggatacagcaaaaatggtcatcttcaagacttgattcatctgatgcaaataactgggaatttgatcaggaaacatctcttgagttgcttacaagggctttagtctccaacctttgcccgttttcagtgacaaccagtgcaaattttaggaagttttttgctggcatctgtcctacatataatattgtgccacaggctgcaattgaagagaagttcctcagcatttttcagaatgaaaagatgaagctaaaagaggaaatagcacttaaacctggaggagttttcttatccgtaacaaggtgggcccctgaatgtaaacaattcctctgtttcactgtacattttattgacaaggagtggaagttgaatagaaagatcataagattccaattttctggagatgaggcccttgaagctgagcactatgtcagtattctgtccaactggaagtccttctcgaatataagaaatgcaagctatgaatatggtactgaaaagactaacaaggctctaataaaagcagcagtccaagattggaatcttgagaagaagcttttaggaattgcattgccaacgaatataggtaatgaagttatattggatttggaggagactatgacagcagcaggacagaatttccttcttgctaaatataagttattaattgtgccttgtatgataaacgcgcttcatggcttgtttggttatactcttgaaagatacgtcctggaagcaagtcgggaatggtttgagtacatgacatgctcagcaattcgtctggaaaaatacaaggaaattttgttgcgcctgcacctaagccaaccatcttttggttcacagaaatggcatttgacttactacttatttgaggctgctttgcagtttgtaaaagaattcccaaaccctgacgcggcgcatttgaaaatgtttctacggaaaccatttcctgaaagactagaagcaacaaaaaacttttgtgatcttgcaaggccaatttaccatgcaattgatgtactttccagacagaacgtggctttcaactcacattttcatgtaatttggagtttgggaacagttctgaaggaatcatccaaaaagataaacattaagcgcatcatcgatattgatgatatgctgaaaaaatttgacaatctatggagaaaatgctacgtgtggttgtctttggctgttgttctagatcccaggttcaaattaaggtatcttgaacagtgtttcaaacaagctttcggtactggtgccaaattgtgcatcctggaagtgcgtggaaagatttatgagctctttcttcaatactcctgtaatgctgatcagcaaagtggtgaactagttaatcattggaacaatgacttacagatggatagagatggtaatgattcattacatggcaccgatcaaaatgacattgggcaatcggcactcggggaattcagagaactgactttgtaccttgaagggggactttgtcctcaaaatgaacaatttgatatcctgaaatggtggaaggataatgcgttgacgtatccaactcttgctaggcttgcacgcgacattttagcaatacctggaagtgcggtttctgctgagtctgctttcgacgaaactgatgaacgggtgagccttttcaatcgaaagcttagtcctgagatagtggaagccctcatctgcactcaggattggataaaatcctcagaaacaggtgatgaaaacggtggaagctga</cdnaseq>

Protein Sequence

<aaseq>MENQSGQAQDGMADQRFRSWLTEQFNTQPYAGSSSNLAVMQMQV LPSHTTSQIIDTHPPEYDGYNWRICGQKVVQGGCHQKFYYECSQANCGAEKSVTRSAD GQIKKTVCKGSHNHPLSSERVFGEGSATLDAIPVGEILQAAGVIRPSVAMPMNEEEDE LQSGLGDSEEDDANEARVDGDGAAADANAIERHGAAQDITAQTATEVDVTGNGCQQRK NYCRSENRRSKSKVWKEFTAVLSVGKIQSAECKHCKKCLSGKSSGGTSHLRRHLKICP GQCRDTRIQQKWSSSRLDSSDANNWEFDQETSLELLTRALVSNLCPFSVTTSANFRKF FAGICPTYNIVPQAAIEEKFLSIFQNEKMKLKEEIALKPGGVFLSVTRWAPECKQFLC FTVHFIDKEWKLNRKIIRFQFSGDEALEAEHYVSILSNWKSFSNIRNASYEYGTEKTN KALIKAAVQDWNLEKKLLGIALPTNIGNEVILDLEETMTAAGQNFLLAKYKLLIVPCM INALHGLFGYTLERYVLEASREWFEYMTCSAIRLEKYKEILLRLHLSQPSFGSQKWHL TYYLFEAALQFVKEFPNPDAAHLKMFLRKPFPERLEATKNFCDLARPIYHAIDVLSRQ NVAFNSHFHVIWSLGTVLKESSKKINIKRIIDIDDMLKKFDNLWRKCYVWLSLAVVLD PRFKLRYLEQCFKQAFGTGAKLCILEVRGKIYELFLQYSCNADQQSGELVNHWNNDLQ MDRDGNDSLHGTDQNDIGQSALGEFRELTLYLEGGLCPQNEQFDILKWWKDNALTYPT LARLARDILAIPGSAVSAESAFDETDERVSLFNRKLSPEIVEALICTQDWIKSSETGD ENGGS</aaseq>

Gene Sequence

<dnaseqindica>5801..5829#3812..5700#662..754#1..575#atggagaaccagtcaggtcaagctcaggacggcatggccgatcaaagatttcgcagctggctgacagaacaatttaacacgcagccgtatgccggctcttcttccaacttagcagtaatgcagatgcaggttctgccatctcacacaacttctcagatcatagacacacacccacctgaatatgatggctacaactggagaatttgtgggcagaaagtagttcagggtgggtgccatcagaaattctactatgaatgttctcaagcaaactgcggtgccgagaaatccgtgacacgctccgcagatggacagatcaagaaaacagtatgtaagggcagtcacaaccatccactctcatcagaaagggtgtttggagaaggttcagctacgctggatgcaatccctgttggtgagatattacaggcagcaggggttatcaggccttcagttgcaatgcctatgaatgaggaggaagatgagctacaatctggtttgggtgacagcgaggaagatgatgctaatgaagcaagagttgatggtgacggtgctgctgctgatgccaatgcaatagaaaggtgctcaatttaactgaatttttgttacttccatagtttgatttttacaaggtccagtgcataaattgggtatttctgctggacagacatggtgcagctcaagatatcaccgctcaaactgcaactgaggttgatgttacgggtaacggctgtcagcaacgtaagaattattgccgaaggtaatcccagtgactcacgagctgctgctctctatgactttcttctttccctctatttttagtttcactcttggacataaaccaaagtacatgaaatggtactacgatagtgtttacacccaaatttggctcctaagctcaaaataaggaaaattacccagattttggaaagtcgtcggtttcctccactaggccggtctaaccgccgtgtatgggccggttagaccgaggcttgagggacggtctgaccggcggcatgtggccaccaactgagtccgagcccgagtaagttttcgtcgggtctcaggtttccttgcttgggaaggtatgtttcgggtttccattggtttctaccccgaattggacgtggaggaggacttgtaggaggcaagaccaacccctatttaagggaaaaggccggttcgattgagatggatctctccctcaacaatctctacaatcgaatcgttcttttacttttcagccatgttttctactttaccctagtttagtccatctttgtcgatttgcaccataaatcgtccgccgtcattgcgagagtgcgattacccctttgtaggtttgtcctgtaaacctttcgttcgcccacgagacgggtagttatcctcatatcgatctaaatcggcctagaggctgtttttgatctctaaatcggctctgctagccggtttagcttttctttctacaaaacccatcttgatttggcgtttggctagatcggggtggttggcgactctatattaccgcaaggcgtttaggtgtcccgatcgtgattgtcttcttgccaaaaaagttgccaacatatagcatatgaatggaagttcattatagtgatgtcatgagatgcattaacttgtatgatccagttaatgaatggccctatttgcattgctaaaccatcagaataagagctatcatgaattatgttatatatcgttgttgtctttgtgtgtgaatctttccaggtaaagaaatagcaacctgacaatttcttttcaaatttaatgtggcatatatggcatctcttaagtagaatttccatgagttttttttatattgacaactatgggagcaaaactatggagctgggtaattcatggtgttcatgctctagttttgaatggcataaccaaataactactcttaatggctattctttcttatttgaacatttaagttcttagattgagcaaaacattgcactctttatgtatagtctagaacatttttttagataatggattatattaaacccggcctctacaccttgtgagggtgtacacagccaaaaccatagtcacgactcacgagtacataagactcctccaattacataggaacacacaaataaaagtttaacaaatgattaaagaggaataaaggctaagcttcaattcttcttcaaaaattccatccaaaggtagaaaagaactccataactcgcttctccagaattctgcagttgacttgaacttcctctccaacttttttaagaagcaaagaccaaagccttcctcaatgagttgccttgaatattacccgtaagaaagaaatatgattaattgtagccgtttaagactatgtcattcgtactaagccacaaagcccaacaaattgctgccctcccaagtttgtcttttgagtttaggttcaaaaccattcaaccaattaccaaacatatgagcgcaacttctgggttgtctaatctcgaaagtaaaataaaccgcactccatatgtatctagccattgtacaatcaaagaaaaggtgttgtatcgacttatcagagctacaaaagctacatagtaagctacccttccatattctcttagctagattatcctttgttagaatcaccccctttttcagataccataggaaaatcttaatctttaatggaattcttagcttccaaattaaagatttcctaggtattactccattaaacataagtaacttatgcatagagtttacggtgaacaacccttctttattaattttccatatgaattggtcatgttcacttgtcaaattaacattagccactttcgagacaatgacataccaattttccaagtttttcccaactatcgctcttctaaaggacacattcaacggtatcgtttccaaaaccttagcaactactgtattcttattctaaactaggttgtacaaattaggaaattctttctcaagaaatttgtttcccatccaacaatcctcccaaaatctaacgtgtttcccatttctcactttaaagtgtccaagtagttggaaggattcttttgctgtcatgagactagcccagaaatgagaatctctttgttgcttttgaacctatagaatgttttttttttgccaaatatttttccaaagcaaatttttcctaattccctcttcattgattaacttaaagatccatttactaagcatacacttattttgaatctctaggttctgaatccctaaacctccacactccttgggtttgcaaagtcactccattttggccagcatatacttctttttctgttcatcacattgccaaaaaaaatctggatatataatagtctagtttctttaagatacctctagcatatacatcgctagattgcttagcactgaattgatgaggactaacctccctcctgttgacaaaaactttcccttccaactactgagcttatacagtttggaacattatgcaagttatttattaaaagaagttaagaaagttgttcacctgagaattaattttaaaattacttatatagacaatcggttaacctattatgctttctataaaagcagggctcaaaaagccttttatctaaaaaaaacaattggttaaccttgtagacacagtctctctcttttgtcactggttagtatcagtactgccttatacaatgcttttcccttttgcctaaaagcgttggacctttttctctttttgtggtctatgaaacttcccttctcaatggaatgatttgcatgcttttgacttctatttccgacgactgatctctgatgccagtgaaaatagaagatcaaagtccaaggtatggaaggaatttacagctgtgttaagtgttggaaaaattcaaagtgcagaatgtaagcattgtaaaaagtgccttagtggaaaaagttctggaggaacaagccacctgcgtcgacatctaaagatatgtcctggacaatgcagagatactaggatacagcaaaaatggtcatcttcaagacttgattcatctgatgcaaataactgggaatttgatcaggaaacatctcttgagttgcttacaagggctttagtctccaacctttgcccgttttcagtgacaaccagtgcaaattttaggaagttttttgctggcatctgtcctacatataatattgtgccacaggctgcaattgaagagaagttcctcagcatttttcagaatgaaaagatgaagctaaaagaggaaatagcacttaaacctggaggagttttcttatccgtaacaaggtgggcccctgaatgtaaacaattcctctgtttcactgtacattttattgacaaggagtggaagttgaatagaaagatcataagattccaattttctggagatgaggcccttgaagctgagcactatgtcagtattctgtccaactggaagtccttctcgaatataagaaatgcaagctatgaatatggtactgaaaagactaacaaggctctaataaaagcagcagtccaagattggaatcttgagaagaagcttttaggaattgcattgccaacgaatataggtaatgaagttatattggatttggaggagactatgacagcagcaggacagaatttccttcttgctaaatataagttattaattgtgccttgtatgataaacgcgcttcatggcttgtttggttatactcttgaaagatacgtcctggaagcaagtcgggaatggtttgagtacatgacatgctcagcaattcgtctggaaaaatacaaggaaattttgttgcgcctgcacctaagccaaccatcttttggttcacagaaatggcatttgacttactacttatttgaggctgctttgcagtttgtaaaagaattcccaaaccctgacgcggcgcatttgaaaatgtttctacggaaaccatttcctgaaagactagaagcaacaaaaaacttttgtgatcttgcaaggccaatttaccatgcaattgatgtactttccagacagaacgtggctttcaactcacattttcatgtaatttggagtttgggaacagttctgaaggaatcatccaaaaagataaacattaagcgcatcatcgatattgatgatatgctgaaaaaatttgacaatctatggagaaaatgctacgtgtggttgtctttggctgttgttctagatcccaggttcaaattaaggtatcttgaacagtgtttcaaacaagctttcggtactggtgccaaattgtgcatcctggaagtgcgtggaaagatttatgagctctttcttcaatactcctgtaatgctgatcagcaaagtggtgaactagttaatcattggaacaatgacttacagatggatagagatggtaatgattcattacatggcaccgatcaaaatgacattgggcaatcggcactcggggaattcagagaactgactttgtaccttgaagggggactttgtcctcaaaatgaacaatttgatatcctgaaatggtggaaggataatgcgttgacgtatccaactcttgctaggcttgcacgcgacattttagcaatacctggaagtgcggtttctgctgagtctgctttcgacgaaactgatgaacgggtgagccttttcaatcgaaagcttagtcctgagatagtggaagccctcatctgcactcaggattggataaaatcctcaggtacagtgcagctatatacttcatatcattcaacatgtagtgaacctagtatttagtattgctgactgtaactgtgatgttcctgcctgttggttaacagaaacaggtgatgaaaacggtggaagctga</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0198000, RefSeq:Os08g0198000