Os08g0198300

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Revision as of 12:50, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0198300| Description = TRAF-like domain containing protein| Version = NM_001188496.1 GI:297726122 GeneID:9270538| Length = 1629 bp| Defini...")
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Gene Name

Os08g0198300

Description

TRAF-like domain containing protein

Version

NM_001188496.1 GI:297726122 GeneID:9270538

Length

1629 bp

Definition

Oryza sativa Japonica Group Os08g0198300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:5680463..5682091

Sequence Coding Region

5680879..5681220

Expression

GEO Profiles:Os08g0198300

Genome Context

<gbrowseImage1> name=NC_008401:5680463..5682091 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:5680463..5682091 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggggcgtcattctcgtcgaacctcaccgacgccgcgcgcgccgtgcacatgttcaagatcaatggctactccgccaccagagccatggcgaggacggactccctcccgtccaggcgcctccccgtcggcggctaccactgggagctccgctacaccgccagcctcatcgccgactccaaccactgggtcgccctcaagctcgtcctcctcgccgcgccgacgtcaaggccgcgctccgatgccgcctcatcagcaatagtgccaccacctctgccgccgtcgacggccacgtgtcgcacgcgttcaagcgcgccggcgagagctccgcgtgggtcctga</cdnaseq>

Protein Sequence

<aaseq>MGASFSSNLTDAARAVHMFKINGYSATRAMARTDSLPSRRLPVG GYHWELRYTASLIADSNHWVALKLVLLAAPTSRPRSDAASSAIVPPPLPPSTATCRTR SSAPARAPRGS</aaseq>

Gene Sequence

<dnaseqindica>417..758#acgacgaccagatcgaccaaaccatcggcgctcgcctcttgcgactgagagcctgagcgagacacagaggtaacactctccttttggagttcaatcgattgttctagttccttagataaactcaaaaattgttctagttcgatcgacttatcggattttgaatctctacttgaaacttccttttgaacttcccgctgaagttgaaatagttctcagatcgacatgggatggagaggattcatttttcacatccatctaatcgcctcgacattacaatttgtaatagcgattgcacattcattcattaggtagctcctgagactgtttatctactacagtaacttaactttgatgtaatcttgctattaatttatccccaattcctcgatcttcctatacttaagatccgtacatccatgggggcgtcattctcgtcgaacctcaccgacgccgcgcgcgccgtgcacatgttcaagatcaatggctactccgccaccagagccatggcgaggacggactccctcccgtccaggcgcctccccgtcggcggctaccactgggagctccgctacaccgccagcctcatcgccgactccaaccactgggtcgccctcaagctcgtcctcctcgccgcgccgacgtcaaggccgcgctccgatgccgcctcatcagcaatagtgccaccacctctgccgccgtcgacggccacgtgtcgcacgcgttcaagcgcgccggcgagagctccgcgtgggtcctgatccttcgccggagcgccctggaggcgtcgggggccatcgtcgacgacgccttcaccgtcgagtgcaccatcacggtgatcacggagatacctgacaatgtcgctgcggcggcgccggcagcgccggcgaatgttctgcccccgttctccggccgtggtctgtccttgagccatcacctcggcgagctcctgcgccgcgggacgggggcggacgtcacgctggtggtgtccggcaagtgcttcccggcgcacagggcaatactcgcgtcgaggtcgccggtgttcatggcctccttgttcggcgacatgaaggagaagagctcccggagcgtcgagatcagggacatcgagccacaggtgttcggagcaatgctcggcttcatctacaccgactcggtgccggagctcgatcaacaagacggcgtcgtcgtcgcgcagcacctgctggcggcggcggacatgtgcgggctcgacgggctgaagatcatgtgcgaggagaagctcatcgctggcgccaccgtggagacggcggcgacgacgctggcgctggcggagcagcatgggtgcccgcggctcaaggcgaggtgcgtcgaggtcgtcgccgcgaacctcgacgccgtcatggcgaccgagggttacaagcatctcatggcgagctcgccgctggtgatgaatgatctcctcagggctgtgcgtggaaggaagagctgaattaatcaccgaggtgattagtcccaatctcaaacatttggtattactaatagcaatgctatgtataggtaggagtatttgcttgcatctgatgttgcgttatctcgtatgtaatgaacagctaagctcataaacagtttcagcccactatgaatttatct</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0198300, RefSeq:Os08g0198300