Os08g0200100

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Revision as of 12:50, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0200100| Description = Fatty acid desaturase, type 2 family protein| Version = NM_001067744.2 GI:297608119 GeneID:4344897| Length = 1558 bp...")
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Gene Name

Os08g0200100

Description

Fatty acid desaturase, type 2 family protein

Version

NM_001067744.2 GI:297608119 GeneID:4344897

Length

1558 bp

Definition

Oryza sativa Japonica Group Os08g0200100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:5786586..5788143

Sequence Coding Region

5786740..5787850,5787919..5788022

Expression

GEO Profiles:Os08g0200100

Genome Context

<gbrowseImage1> name=NC_008401:5786586..5788143 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:5786586..5788143 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcatcggcaacgacctccaccttagcagtaaccatgtttgggtatccaaaccgcaactgtcacctcaagccgccggcaactgccactctccgattctggcggagcgcggcggcggcggcggtggcgacgtcacggcgggaggcggaggcggaggaggcggacgaggtgaggaggtgcctggcgccggcgaggcttgaggtgctggagcagatggagccgtgggtggaggcgcacgtgctgccgctgctgaagccggcggaggaggcgtggcagccggcggacctggtgcccgacgcggcggcgctcggcgccgacgggttccacgcggcgtgcgtcgagctccgggggcgcgccgccggcgtgcccgacgcgcacctggtgtgcctggtggggaacatggtgacggaggaggcgctccccacgtaccagagcatggcgaaccggttcgagtcggcgcgcgacgtcaccggcgccgacgcgacggcgtgggcgcggtggatccgcgggtggtccgccgaggagaaccgccacggcgacgtgctcaaccgctacatgtacctctccggccgcctcgacatgcgccaggtggagcgcacggtgcaccggctgatcggctccggcatggcgatgcacgcgccggcgagcccctaccacggcttcatctacgtcgcgttccaggagcgcgccaccgccatctcccacggcaacacggcgcgcaacgtccgcgcccacggcgacgacgcgctcgcccgcatctgcggcgccatcgcctccgacgagaagcgtcatgaggccgcctacacccgcgtcgtcgagaggctcctcgaggccgacccggacaccaccgtgcgcgcgctggcgtacatgatgcgccgccggatcaccatgcccgccgcgctcatggacgacggccgcgacgccgacctgttcgcccactacgccgcggcggcgcagcaggccgggacgtacaccgcgtcggactaccggggaatcctcgagcacctgatacggcggtggcgcgtggcggagctggaggcggggctctccggcgaggggcggcgcgcgcgggactacgtgtgcgcgctgccgcagaagatccggaggatggaggagaaggcccatgacagagcggcccagatgaggaaaaggcccacggccattccatttagctggatctttgataagcccgtggatctcatgctgccctaa</cdnaseq>

Protein Sequence

<aaseq>MAASATTSTLAVTMFGYPNRNCHLKPPATATLRFWRSAAAAAVA TSRREAEAEEADEVRRCLAPARLEVLEQMEPWVEAHVLPLLKPAEEAWQPADLVPDAA ALGADGFHAACVELRGRAAGVPDAHLVCLVGNMVTEEALPTYQSMANRFESARDVTGA DATAWARWIRGWSAEENRHGDVLNRYMYLSGRLDMRQVERTVHRLIGSGMAMHAPASP YHGFIYVAFQERATAISHGNTARNVRAHGDDALARICGAIASDEKRHEAAYTRVVERL LEADPDTTVRALAYMMRRRITMPAALMDDGRDADLFAHYAAAAQQAGTYTASDYRGIL EHLIRRWRVAELEAGLSGEGRRARDYVCALPQKIRRMEEKAHDRAAQMRKRPTAIPFS WIFDKPVDLMLP</aaseq>

Gene Sequence

<dnaseqindica>294..1404#122..225#tcgctaagtagtcgcatccactcatattccaagccttctcgccgccgccgccgccgccgccgccgtcgccatcgccgtcgtcttcctccctcctccgatcagatccacgtactgctcgatcatggcggcatcggcaacgacctccaccttagcagtaaccatgtttgggtatccaaaccgcaactgtcacctcaagccgccggcaactgccactctccgattctggtaagcttttaaccgccactggtcgctgagctctctgtacgtgtgctgacgtggcagtgtcggtgcaggcggagcgcggcggcggcggcggtggcgacgtcacggcgggaggcggaggcggaggaggcggacgaggtgaggaggtgcctggcgccggcgaggcttgaggtgctggagcagatggagccgtgggtggaggcgcacgtgctgccgctgctgaagccggcggaggaggcgtggcagccggcggacctggtgcccgacgcggcggcgctcggcgccgacgggttccacgcggcgtgcgtcgagctccgggggcgcgccgccggcgtgcccgacgcgcacctggtgtgcctggtggggaacatggtgacggaggaggcgctccccacgtaccagagcatggcgaaccggttcgagtcggcgcgcgacgtcaccggcgccgacgcgacggcgtgggcgcggtggatccgcgggtggtccgccgaggagaaccgccacggcgacgtgctcaaccgctacatgtacctctccggccgcctcgacatgcgccaggtggagcgcacggtgcaccggctgatcggctccggcatggcgatgcacgcgccggcgagcccctaccacggcttcatctacgtcgcgttccaggagcgcgccaccgccatctcccacggcaacacggcgcgcaacgtccgcgcccacggcgacgacgcgctcgcccgcatctgcggcgccatcgcctccgacgagaagcgtcatgaggccgcctacacccgcgtcgtcgagaggctcctcgaggccgacccggacaccaccgtgcgcgcgctggcgtacatgatgcgccgccggatcaccatgcccgccgcgctcatggacgacggccgcgacgccgacctgttcgcccactacgccgcggcggcgcagcaggccgggacgtacaccgcgtcggactaccggggaatcctcgagcacctgatacggcggtggcgcgtggcggagctggaggcggggctctccggcgaggggcggcgcgcgcgggactacgtgtgcgcgctgccgcagaagatccggaggatggaggagaaggcccatgacagagcggcccagatgaggaaaaggcccacggccattccatttagctggatctttgataagcccgtggatctcatgctgccctaattaattactttgttttgtgctaattatatggtgggtattgagcttctggttgtagtggtttggtgtgtgttacccaaagttgtgttcattgtatttatctacctcaaactaaataaaatcaaatgatgtaatgttcctagtaaggttgttcatc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0200100, RefSeq:Os08g0200100