Os08g0203300

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Revision as of 12:50, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0203300| Description = Protein kinase-like domain containing protein| Version = NM_001067757.1 GI:115475250 GeneID:4344913| Length = 7334 b...")
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Gene Name

Os08g0203300

Description

Protein kinase-like domain containing protein

Version

NM_001067757.1 GI:115475250 GeneID:4344913

Length

7334 bp

Definition

Oryza sativa Japonica Group Os08g0203300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:5997170..6004503

Sequence Coding Region

6001276..6001352,6001459..6001503,6001587..6001651,6001749..6002128,6002219..6002417
,6002498..6002656,6002738..6002856,6002988..6003198,6003306..6003537
,6003619..6003769,6003864..6004223

Expression

GEO Profiles:Os08g0203300

Genome Context

<gbrowseImage1> name=NC_008401:5997170..6004503 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:5997170..6004503 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gctttttgcagagatttttcgtacaaccaactcatgggaaactttccttcatgggctaccaataataatttacaactgaatttggtggcaaacaaatttaatattcgaagcaacaacgatagtattctaccttcaggactaaactgcctacagcaagacactccttgtttcctcggttctccggaatactattcctttgcagtagactctggtagtaatagatctgtgagaggtttggataatactgtgtacgaagctgatgctacaagtctcggagctgcatcatactatgttacggggcaaacacgatggggtatcagcaatgtaggaaaattcaatgaggccccaaatggaagttacctaatgtacagctcgcaacaatttcaaaatgcgttggattcagaattgttccagactgccagaatgtcaccatcgtccctgagatactatggcctagggcttgagaatggaaattacactgttcttcttcaatttgcagagtttgcttatccagacacaaagacttggcaaagcatcggaaggagagtttttgacatatatgtccagggtgatctgaaagaaaagaacttcgatgtaaggaaaacagctggcggaaaatcttttattgcagttaacaaaagatacaacgcaactgtgtcaaaaaacttccttgagatacatctgttctgggctggcaaaggcacttgttgcattcctactcaaggttactatggacccatgatctctgcactaagtatcactccaaattttactcctactgtgagaaatggagttccaaaaaagaaaagtaaagctggtgtaattgctgggatagtgattggtgcgtcagttataggatcagcagccttacttgggatctttgttttggtaaagaagagaagaaaagcggcaaggcagcaagaagaactatacaacctggttggaaggcctaatatcttcagtagcgcagaactgaaattagctacagacaatttcagttctcaaaacgtgattggagaaggcggatatgggccagtatataagggtaagctacctgatggaagaattatagctgtcaaacaactttctcaatcatctcatcaggggaaaagtgaattcgtgacagaagttgcaacaatttcagccgtgcagcacaagaaccttgtgaaattgtatggctgttgcattgacagcagcacacccttgttggtttatgagtacctcgaaaacggaagcctagaccaagcactctttggacatggtagcttgaacctagattggccaacacgcttcgagatcattttaggtattgcaagaggcataacttatcttcatgaggagtccagcattcggattgtgcatagggatatcaaagctagcaacgtcttgcttgacactgatctgagcccccaaatctccgattttggacttgccaagctctatgatgaaaaggagacccatatcagcacgaaaatcgctggcacattcggctatctggcacccgagtatgcaatgagaggccatctgactgaaaaggctgatgttttcgcatttggagttgttgctctagaaacagttgctggccgatcaaacaccgacaattcccttgataatgacaagatctatctctttgaatgggcttgggggctatatgaaagagagcaaggaatcaaaatcgtagacccaaaactcgatgagtttgacagtgaggaagccttcagagtcatctatgccgcacttttgtgcactcaagggtcaccacaccagcgaccaccaatgtctagggtcctggcaattcttactggagacattgagatgactgagatggtgacgaagccgagctacatcactgagtggcaactcagaggagggaacaccagctatataagcagcaactatagctctggatctactactggtgaatttagagagcagagggagacttccccactcaccccttctccaacgataaccggagtcacatatgatggaaggtga</cdnaseq>

Protein Sequence

<aaseq>AFCRDFSYNQLMGNFPSWATNNNLQLNLVANKFNIRSNNDSILP SGLNCLQQDTPCFLGSPEYYSFAVDSGSNRSVRGLDNTVYEADATSLGAASYYVTGQT RWGISNVGKFNEAPNGSYLMYSSQQFQNALDSELFQTARMSPSSLRYYGLGLENGNYT VLLQFAEFAYPDTKTWQSIGRRVFDIYVQGDLKEKNFDVRKTAGGKSFIAVNKRYNAT VSKNFLEIHLFWAGKGTCCIPTQGYYGPMISALSITPNFTPTVRNGVPKKKSKAGVIA GIVIGASVIGSAALLGIFVLVKKRRKAARQQEELYNLVGRPNIFSSAELKLATDNFSS QNVIGEGGYGPVYKGKLPDGRIIAVKQLSQSSHQGKSEFVTEVATISAVQHKNLVKLY GCCIDSSTPLLVYEYLENGSLDQALFGHGSLNLDWPTRFEIILGIARGITYLHEESSI RIVHRDIKASNVLLDTDLSPQISDFGLAKLYDEKETHISTKIAGTFGYLAPEYAMRGH LTEKADVFAFGVVALETVAGRSNTDNSLDNDKIYLFEWAWGLYEREQGIKIVDPKLDE FDSEEAFRVIYAALLCTQGSPHQRPPMSRVLAILTGDIEMTEMVTKPSYITEWQLRGG NTSYISSNYSSGSTTGEFREQRETSPLTPSPTITGVTYDGR</aaseq>

Gene Sequence

<dnaseqindica>4107..4183#4290..4334#4418..4482#4580..4959#5050..5248#5329..5487#5569..5687#5819..6029#6137..6368#6450..6600#6695..7054#agcagagagacagacagacagacaggcagacagagtgatcagagcgagataacgtgacacagagacacagagaggcaaagagatgatgaggatacgctgcagcagcagcagcagcggcggccatggtggtcatcagctcatcctgtgctggctggtgatcgcgtgctcatgggttgcagtagctcgagctcaggctcagaagccggcaggagcaacaactgatccagtcgaaggtatgtatatatgtatttatcagttaattacatgcattcacagattacagagacaccgctgttcttttctgctggagagatgttcttggagaaaagacatagattttcatggttgcacacaagcatgttcctctcttctttccattttctttgagacttcggagttcagagagacatggcttatgagttatgactactacatgcttgatgatgcttccttgtttgtagtagcatctaccatgggtacagttgatgcaacttgcaacagattacagttgaaactgtaatatttaggggtctctaattcttggaggttcagagatgggcctggatcttctttccttttccttgcgactttagagagacatgaaacttactacatgtttgatgagttgatgtgtagcatttagcatggatataattgacgcaacttgcaaattgcaacagcttagagacaaattagcagttagcagtgagagttaatcctcggattcctcggatattattaattcgttcctttcttggccgtttactgttttttttttttaaattgaagagaagaccaaaggtcagaacacccacgtttttgtgatgaacagtaaaagaaaaagttcagagcaagaatttcatcattacggcgatgaacagcatcagacatcttctgttttccaagttcagtgatcaagttcaagtttgatacaccatccaaatctttgcttcttcctgctgtttctgttttgttgactaatggaggagaggagttctgtttggtgtggttggtgaccgttaaaaagtcaattttttctctctttctgacgttgttttctcgcctctgtttttttgctagttttctcttcacacatacttccttcctttcaaattaaagtctttttactttttttctacacaaacttgtttggtcaaatttacagaaaaaaatagaaacattaaaaattgacctttttcgtagataaacttgtttgatcaaatttacagaaaaaatagaaacattaaaaataataaattagtttcattaaatctaagatcgaatatatttcgataataagttttttttttaaaaaaactaatatgttttttttataaatttagttaaagttgtaaaaaaatcaaaacgacttataatataaaacggagagaataaaaggtaaaaaaattgattggattcgtgtgcaaatgtcaacgcagtggcggcgctgaacacgattctggggcgatggggaacgaagccgcccaaaacgtggaacatcaccggcggcgacccctgcaccggcaccgccgtcgacgacaccgacatcgacaacaaccccatcgtcaaccccggcatcaagtgcgactgcacattcaacaacaacaccgtctgccgcatcgtcaagctgtacgtatcctcccctgaactcaaacctcttgtctcagctgcaggcaaggtgttcgacgcattgcctgactgaaagagagaggccatgcgatcctccaaaattaggatgctggtggttgcaggaatgctctgggatcaagtgacgatgaattgaatttggataactatcacctaattcatttagcaaagcatatatagtttttttttttacttgtcatcagaggaattttactgatgatgtttatgcaggagggtgtacgcgctgaatgttgtcggtcagatacctgcagagctggagaaactcacccatctagctaacttgtatggtgcctaactctttatgcctctgtcttgatgacggaacacatgtctgtcttaacatttgatgatcgaacacaatctgttgaacgatgtttctgcagtaaatactaattcagtcccattctttgaacattcaattgtcacttgccagacaaaacacggataaatagatatcagaaatcaggtatacaattcctttttgtactctgtctaacttgcttggcgattcttatgttgtttcagaaacctgatgcaaaattacttgactggtcctgtgccatcattctttggcaaatttcccatgcagtacttgtaagagttaaattccaagttatatatttttgtaccatccaatatctgctggtgctttctcttaatcatctttctttctttctttcttgttttattttaaaaaggagcttagcaatcaatccattatctggaccacttccaaaggaacttgggaacctcacaaatctcatctcattgtaagatatcccttccacgatttctcatgttacttaatcatttcaatttcattttcctttcctagtgtgtttaatatactgaaacccaaacaacgaagtctcaaaagtggtggatattatggatcaacactgttgcagacaaataagttatgttactcaactatttccttttgtttcagaggtatcagcctgaacaattttactggaaaccttcctgaagaattgggcaacttgaccaaactcgagcaaatgtaaatctcccccctcccccctttaattaaccagtagaacactacttcagaaagaactgacaagcaagatctatattgttgaacatgctaattactatgtttcaataacaggtatattgatagttctggcttctctggtccattcccttcgacaatttcaaaacttaagaagctgaagatcctgtacattcaagaactgagccacagttattatgtttattgtgtcttcatacactcaatgctatatatgttgttgtgcttgcaggtggatatcagataatgatttcacagggaaaatacctgattttattgggagcttgactaacttggaggatttgtaagatttttgtcaacctcttaacataatcatttattatatcctatcaaggagatgaatagaaatcttgcaacataacttttctgtatgtattcttttcatttgaattaagagaacaacgttattcattttttagtcctcaacttcgacataaatgctacgttatgaataaatttacattttctttatctattcatgcaagatgttaaaatgtatatcttaaggtggactttacatcttcctaatttcttaaagcatgaacttgtaggaggttgcaaggaaattcttttcaaggtccgatcccagcaagtttttctaagttaaccaagttgacaagcttgtaagtattctgttctttggccacatttgtcccttgactgttgggaaggccaaacttgtcttaatagtgccaaatacacatatgcagacggattggtgatattgtaaatgggagctcttcattggcctttattagcaacctgacgtccttaaatgtcctgtatgtgtcctgcttttaagttctaacgatagatattattgttttttttattgcaaagtactattggagtagtattttctgagacaacatattctttgtttcagaatattgaggaactgcaagatatccgataatcttggagcagtaaattttactaagctttctcgattaaacttgctgtaggttttgtctttatggcatactgactatttatgttattagttattgtttctcatagtttcatgtgaagtgtttactcaagtaatattgctaaacatatggcacagggacttgagttttaacaatatcacgggcgaagttcctcagtccatccttaatctgaacagccttcgatatttgtaaggaattcttttatggcgattatttctgttatagaaatacatcttaagctaatgtccatgcctcatcgtcttgaatggaaactcaattcaggtttcttgggaacaatagccttacaggaagcctgccagatgtgaagagctcctcactaaataatttgtatgctaaaatgattttcagcattgcaatgatatattcatttcatacgttcgtaatcctaggctttttgcagagatttttcgtacaaccaactcatgggaaactttccttcatgggctaccaataataatttacaactgtaagttgaaagttctgaaatttcagacaaatatatattgatttagacactctctacattatgtgaaattattgcctgacaagttagacgtatttttttgtacaaggaatttggtggcaaacaaatttaatattcgaagcaacaacgataggtacctataacatatttgcaaatatttatttttgacgtcaccttcctcataatttttatttcttgtttctgttatgcgcacagtattctaccttcaggactaaactgcctacagcaagacactccttgtttcctcggttctccggaatgtatatttttgcactcttcatcgattttagcatttaagaaaatatctcaggattttcaataaaaggttataattttgttcatcttaactgcatgcagactattcctttgcagtagactctggtagtaatagatctgtgagaggtttggataatactgtgtacgaagctgatgctacaagtctcggagctgcatcatactatgttacggggcaaacacgatggggtatcagcaatgtaggaaaattcaatgaggccccaaatggaagttacctaatgtacagctcgcaacaatttcaaaatgcgttggattcagaattgttccagactgccagaatgtcaccatcgtccctgagatactatggcctagggcttgagaatggaaattacactgttcttcttcaatttgcagagtttgcttatccagacacaaagacttggcaaagcatcggaaggagagtttttgacatatatgtccaggtacatattgagcgcatagtacaataattcaattacctattttgtaccctttattaacatatttgtttgtccaacttggcatctgcatagggtgatctgaaagaaaagaacttcgatgtaaggaaaacagctggcggaaaatcttttattgcagttaacaaaagatacaacgcaactgtgtcaaaaaacttccttgagatacatctgttctgggctggcaaaggcacttgttgcattcctactcaaggttactatggacccatgatctctgcactaagtatcactccaagtaagctcagtacccgaattagttaacttgaagaatgtatgatagttttttttttctgattactgaaacacgttgtccagattttactcctactgtgagaaatggagttccaaaaaagaaaagtaaagctggtgtaattgctgggatagtgattggtgcgtcagttataggatcagcagccttacttgggatctttgttttggtaaagaagagaagaaaagcggcaaggcagcaagaaggtatcatttaagtgcagctctttaggtgccaaaattttcaaatgagttattctttctcatgtgttgtgaaaaaaaatgcagaactatacaacctggttggaaggcctaatatcttcagtagcgcagaactgaaattagctacagacaatttcagttctcaaaacgtgattggagaaggcggatatgggccagtatataaggttagtggttcccacaagtcgtcaatcaatctatgaggatttaccttattgtgtactaactaaaattgttttgcaactcaactggtgtaaaatcaaaatatgtatgtaactcagggatctttctttgacagggtaagctacctgatggaagaattatagctgtcaaacaactttctcaatcatctcatcaggggaaaagtgaattcgtgacagaagttgcaacaatttcagccgtgcagcacaagaaccttgtgaaattgtatggctgttgcattgacagcagcacacccttgttggtttatgagtacctcgaaaacggaagcctagaccaagcactctttggtaagttcagttgtgcgaccttcttcctttcatgtactgtcaagaacttttcttctctgcattataccatcatctcaattctcaaggccttatttctccatgttcaggacatggtagcttgaacctagattggccaacacgcttcgagatcattttaggtattgcaagaggcataacttatcttcatgaggagtccagcattcggattgtgcatagggatatcaaagctagcaacgtcttgcttgacactgatctgagcccccaaatctccgattttggacttgccaagctctatgatgaaaaggagacccatatcagcacgaaaatcgctggcacattgtatgcacatttcaccctttcttttcttatgagtttacctttgaagtctaagctaattttatctcgtctgaccttttgaagcggctatctggcacccgagtatgcaatgagaggccatctgactgaaaaggctgatgttttcgcatttggagttgttgctctagaaacagttgctggccgatcaaacaccgacaattcccttgataatgacaagatctatctctttgaatgggtaagttgatcaatggtctttgcatccaagaaaatacattggctgattctatttctcacaatcaacacgttgtccgtatgataatttatactaggcttgggggctatatgaaagagagcaaggaatcaaaatcgtagacccaaaactcgatgagtttgacagtgaggaagccttcagagtcatctatgccgcacttttgtgcactcaagggtcaccacaccagcgaccaccaatgtctagggtcctggcaattcttactggagacattgagatgactgagatggtgacgaagccgagctacatcactgagtggcaactcagaggagggaacaccagctatataagcagcaactatagctctggatctactactggtgaatttagagagcagagggagacttccccactcaccccttctccaacgataaccggagtcacatatgatggaaggtgaatgcaaatatgttcaaatcgcttctggttttagcttcaagtgatatttttggacattgtggagttgcaacaaatatatggatttattttgttctgaatattttccatactcataaccaagtcatcctggtaatttgtatatgccagttgtatttgcatgggtgctttaaaattcatttagttaaattagttttgattttttttttgagaaatgactgacgaatttgttggctagagcacacttccgtaatcacagatgcttggcattgcataaattaatt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0203300, RefSeq:Os08g0203300