Os08g0207500

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Revision as of 12:51, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0207500| Description = Similar to Zinc transporter ZIP1 (Fragment)| Version = NM_001067780.1 GI:115475296 GeneID:4344937| Length = 3082 bp|...")
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Gene Name

Os08g0207500

Description

Similar to Zinc transporter ZIP1 (Fragment)

Version

NM_001067780.1 GI:115475296 GeneID:4344937

Length

3082 bp

Definition

Oryza sativa Japonica Group Os08g0207500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:6266828..6269909

Sequence Coding Region

6266862..6267596,6268123..6268272,6269107..6269412

Expression

GEO Profiles:Os08g0207500

Genome Context

<gbrowseImage1> name=NC_008401:6266828..6269909 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:6266828..6269909 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgccatgaggcagagcacgccgcgggccatgctgctcctgtgcgccgtgctgatgctggccgtggcgccgccgggcgcggcgacggcggcggcggtggccgggtgcgagtgcggtaatgcggcggcggcggcggtggcgggggaggacgcgcgcggggcgttgcggctcaagctcgtcgccatcgcgtccatcctggcggcgggcgcggcgggggtgctggtgcccgtgctggggaggtcgttcgccgcgctccggcccgacggcgacgtgttcttcgccgtcaaggcgttcgcggcgggcgtcatcctcgccaccggcatggtgcacatcctccccgccgcgttcgacgcgctcgcttcgccgtgcggcggaggcaggggcggcggaggcgggttcccgttcgccgggctcgtcgccatggccgcggccatggccaccatgatgatcgactccgtcgccgccgggtactaccgccggtcccacttcaagaagccgcgccccgtcgacgaccccgccgacgccgcgcgcgccgccggggtcgaggagggcggcgccgagcacgccggccacgtccacgtgcacacgcacgccacgcacggccacgcccatggccacgtgcactcgcacggccacggccacggccacagccacggcagcgcgccggcggccgccacctcgccggaggatgcctccgtcgccgaaacaatccggcacagggttgtctcccaggttctggagctgggaatcctggtgcactcggtgatcatcggggtttcgctaggcgcatcactgaggccgtcgtcaatcaggccactcgtcggagccctcagcttccaccagttctttgaaggcattggccttggtggctgcattgttcaggcaaattttaaggcgaaagcaacagtgatcatggcgactttcttctccctcactgctccggtgggcattgcactggggatcgcaatctcatccagctatagcaagcacagctcgaccgcacttgtcgtcgagggagtcttcaactctgctgcagcagggatactgatctacatgtccctggtcgatctcctcgctgcagatttcaacaatccgaagcttcaaacaaacacaaagcttcagctggcagtatacctcgccctcttcctcggcgctgggatgatgtctctgcttgccatatgggcatga</cdnaseq>

Protein Sequence

<aaseq>MDAMRQSTPRAMLLLCAVLMLAVAPPGAATAAAVAGCECGNAAA AAVAGEDARGALRLKLVAIASILAAGAAGVLVPVLGRSFAALRPDGDVFFAVKAFAAG VILATGMVHILPAAFDALASPCGGGRGGGGGFPFAGLVAMAAAMATMMIDSVAAGYYR RSHFKKPRPVDDPADAARAAGVEEGGAEHAGHVHVHTHATHGHAHGHVHSHGHGHGHS HGSAPAAATSPEDASVAETIRHRVVSQVLELGILVHSVIIGVSLGASLRPSSIRPLVG ALSFHQFFEGIGLGGCIVQANFKAKATVIMATFFSLTAPVGIALGIAISSSYSKHSST ALVVEGVFNSAAAGILIYMSLVDLLAADFNNPKLQTNTKLQLAVYLALFLGAGMMSLL AIWA</aaseq>

Gene Sequence

<dnaseqindica>35..769#1296..1445#2280..2585#cccctcctccccacacgccacccgcacgcgcgccatggacgccatgaggcagagcacgccgcgggccatgctgctcctgtgcgccgtgctgatgctggccgtggcgccgccgggcgcggcgacggcggcggcggtggccgggtgcgagtgcggtaatgcggcggcggcggcggtggcgggggaggacgcgcgcggggcgttgcggctcaagctcgtcgccatcgcgtccatcctggcggcgggcgcggcgggggtgctggtgcccgtgctggggaggtcgttcgccgcgctccggcccgacggcgacgtgttcttcgccgtcaaggcgttcgcggcgggcgtcatcctcgccaccggcatggtgcacatcctccccgccgcgttcgacgcgctcgcttcgccgtgcggcggaggcaggggcggcggaggcgggttcccgttcgccgggctcgtcgccatggccgcggccatggccaccatgatgatcgactccgtcgccgccgggtactaccgccggtcccacttcaagaagccgcgccccgtcgacgaccccgccgacgccgcgcgcgccgccggggtcgaggagggcggcgccgagcacgccggccacgtccacgtgcacacgcacgccacgcacggccacgcccatggccacgtgcactcgcacggccacggccacggccacagccacggcagcgcgccggcggccgccacctcgccggaggatgcctccgtcgccgaaacaatccggcacagggttgtctcccaggtgagctcatcaccaaccgtcaagctcaatctcgttacgcacatcacaaaacaaaatacagtaaaaatcaaaaataaaaaatttgggcggttcaaatgaaagttccaatttgggatactttataaagatgactggtactagtgtactaccaattgctttactttgccaccatccatttcaaatgtccctctcctttatgcaacaatcacaagggaacatagatagagatgcatagtggtattctacactacacaaattagctgattttgatgggagaaaggcatgtctctttctcttttgtaagagataattcaaatactgacaagaagatcaatcctttgtattgtaactatctgaggtgtctgcccactctgcaattggggataaatcttctctgctcagcctcacaactgaaccccctttgcagattctgcacccaacattgcaaatgttgtaatgtctgaatgaaccaagctttggtgctacttttcgaagaataactgacaaaagaattgtgattgtgcaggttctggagctgggaatcctggtgcactcggtgatcatcggggtttcgctaggcgcatcactgaggccgtcgtcaatcaggccactcgtcggagccctcagcttccaccagttctttgaaggcattggccttggtggctgcattgttcaggtatatcacaataacattttacagccatgattaacatgaacatctcacattacattcataccgcggtataagataatcgacaattcgacatagaagggttgaaactatagctgtgcgcttgtttacctacattgttacatggcaaattgataaaatatctacacgtgaaaatcaggtaaaaggcacctgggctcatgacagaaacagaagggcatgctccattagcaaaagcgtgcgaaaaacgacatatagagtatagacagagatatttatagctcaaatgatagaacttatcactagctacacgactatactgtacaaagcaaacttgaagtaggaccatcaataattgattccgttccactatggttcagaaatccttcactaactgacaagctcaaacaagctcccagcttctcaatgccagttttttttttcaggatacacaaacaggaattgctgcgtcattttttgcccttctgttttcccagatgcttttaaaactggacttcagatttagcatatacctaaaaataccgcgttttcagaaatgggttgagactggtttgtcatgtaacactggccaggattctcaaccattttcaattgttatcagtatactgtatccactatccagtgctgatcaatatccacgcagatattactatgtctgagaagaaccacaatttcagcagtttactttagttcattcaattaggtgaaaatccattccaccataagctactttccataaaaatgaaaaagggacagactttaaagtttctcgtatgagacaataatttgacatactttgtgtcacattttcttacacaggcaaattttaaggcgaaagcaacagtgatcatggcgactttcttctccctcactgctccggtgggcattgcactggggatcgcaatctcatccagctatagcaagcacagctcgaccgcacttgtcgtcgagggagtcttcaactctgctgcagcagggatactgatctacatgtccctggtcgatctcctcgctgcagatttcaacaatccgaagcttcaaacaaacacaaagcttcagctggcagtatacctcgccctcttcctcggcgctgggatgatgtctctgcttgccatatgggcatgagatcttcagagcaaccaagagctgcaaatttttgaatattgtctctgaaaaagacaccctgagcttagtttgtagctgacagggtttgatgttgtcatagcattactgcaaccagcttttgtagaatctccatcaaccagaattggagaaaaagatggcctgaatacgaccgaaagtttagagtttactgacatgagtacacaagtcaaaagttcaggacaaatctgattcttgggcaaatggtgtgcttccaccagtatagcaccaaatgaagtgaacaagaatcaaatgggttagtcgaggtagtggtccttgaacagattttctcttcaagtccaaaagctttgtataaaaatgatgacctccttttggagtcaatgtcaatgtacagattctcagctagggtaaatcctttttgtatgacaagagctctgtgaagtttgttcacttgttcagtgaagaatcaaataatccccagcgttgtctcctttttctct</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0207500, RefSeq:Os08g0207500