Os08g0207600

From RiceWiki
Revision as of 12:51, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0207600| Description = Similar to GTP-binding protein ERG| Version = NM_001067781.1 GI:115475298 GeneID:4344938| Length = 8704 bp| Definit...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os08g0207600

Description

Similar to GTP-binding protein ERG

Version

NM_001067781.1 GI:115475298 GeneID:4344938

Length

8704 bp

Definition

Oryza sativa Japonica Group Os08g0207600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:6271219..6279922

Sequence Coding Region

6271220..6271799,6273044..6273096

Expression

GEO Profiles:Os08g0207600

Genome Context

<gbrowseImage1> name=NC_008401:6271219..6279922 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:6271219..6279922 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tttctctccccaaaataccccccccccgccttaaaccctccgccgccgccgccgccggccgcggcttgtcgccgccatgcgccgcttcgtcggggccctccgcccgctccgcaccctaaccctcagccccatcccgacggcgctccgcgtcctctccaccgcctcggcctcctcttcctccgcctccgccgccgcctcctcatcggactccgactccgccgccgccccggacgccgacttcgacagctcggagttcgcgctgccgccctcggggccgacgccgccgccgccgccgcagcaggcgcgcaacccggtctccgcgctccggaagctccggttcgacccctccctccgcgcgcgcgccgacgaggcgctgttcgggaaggagaggggtggggtggacgatgcggtggaggaggagcggtcgcgggaggttgcgctggccctgctcgaggccgcgctcgagccgcccgacgacgacttgggccctggcgaggtcagggaggaggaccagatgtcgctgtccgtcggcatcgtcggcgcccccaacgccggcaagtcctcgctcacaaacaccatggttggaacaaaagtggctgcagtgtcccgcaagacaaatactacaactcatga</cdnaseq>

Protein Sequence

<aaseq>FLSPKYPPPALNPPPPPPPAAACRRHAPLRRGPPPAPHPNPQPH PDGAPRPLHRLGLLFLRLRRRLLIGLRLRRRPGRRLRQLGVRAAALGADAAAAAAAGA QPGLRAPEAPVRPLPPRARRRGAVREGEGWGGRCGGGGAVAGGCAGPARGRARAARRR LGPWRGQGGGPDVAVRRHRRRPQRRQVLAHKHHGWNKSGCSVPQDKYYNS</aaseq>

Gene Sequence

<dnaseqindica>2..581#1826..1878#atttctctccccaaaataccccccccccgccttaaaccctccgccgccgccgccgccggccgcggcttgtcgccgccatgcgccgcttcgtcggggccctccgcccgctccgcaccctaaccctcagccccatcccgacggcgctccgcgtcctctccaccgcctcggcctcctcttcctccgcctccgccgccgcctcctcatcggactccgactccgccgccgccccggacgccgacttcgacagctcggagttcgcgctgccgccctcggggccgacgccgccgccgccgccgcagcaggcgcgcaacccggtctccgcgctccggaagctccggttcgacccctccctccgcgcgcgcgccgacgaggcgctgttcgggaaggagaggggtggggtggacgatgcggtggaggaggagcggtcgcgggaggttgcgctggccctgctcgaggccgcgctcgagccgcccgacgacgacttgggccctggcgaggtcagggaggaggaccagatgtcgctgtccgtcggcatcgtcggcgcccccaacgccggcaagtcctcgctcacaaacaccatggtacgtgtgttcacgcattgaaagaacaaaaatcttgtgacatggaaatggtttggtttagctcgttgtaacatttcttagaggagcattaggagtttgaagtgcagttgtgtgttttgacactttacagtgatcatagtataatcctatatttctttgtaggtttaacaaacaccatggtacgtattttcatgtcacagcattgaaaattttgtgacatggaaatggttattttgttgtagcattccttagagcaccctatatttgtttgtatcatggatgtttgctaaaatgcttacagaaattgtgttgcttttgtaacttagtgttgttaatttctagacatccttcttaaactcacattctctcactgatctctgcaaccatggttatttggctaatttatccaggtgaaaaattctaactttgctaaacttatgtttagattaatcaacatacaacaggaacgaccattctgcactacaaatacagatgctcctgatctaatcaagctgtagtttaggtcaactagttgtgttgtcagagacaaaaaaaactggaaaagctaacctgtgtgttgtcagagacagaaataactgtgtaagctagcctgcctaggttaagattacctacgctagttattacatcctgaaccatttttttgggactgtttccagtgaggcttaaataataaggaatttcgattatgttccctgagaccaccaatgttcctctagcttgatgttgaattatttcagaaggtctgggcatggccatgagttgttgcaaatcgttgcctcaatggtatcctgttctgtatgaaaaatttaacagaattgtgcagttgcccaattgcagatttgggtttttattactacaatacctaaacatcaataaatatagagtataccattttctgggtctgattggagttcattttttggaattctgttgatataatggcttctttgggttaagtatagtttagtaagcaggtagacttaccagctggctgttgtatgcgtctggcttagcatcatttgtagagactaaatagttaatagtggcaaagacgacaaatgtaaactatgccttttgtttaggccctggtctttttccttataattttggaacctttcctcattaactaaatcaaatggcaaccctgccatttcttaacaaaaaaagggaggagaactggttgtagtggagcctaatgttccatatttatatttttgctacaggttggaacaaaagtggctgcagtgtcccgcaagacaaatactacaactcatgaaattttgggcgtgctgacaaaagggataactcaaatagtatgttctgttaccaatatctgcttgtgctagtatgaagtgaattcatattttcaatttttgatggtaccgttatggatttctaaaaatcctgtctaacgatgcttgtctgtatttcatttgcaaatactgaattctggacaatgatgaatatattacatatcataaaacagagtacattgtgatttatttctaccattactgattacattaagagagatgttcaaatcagtcagtgcaagcacattgtgccccatggcctgattgtatctatctcatagatatataattcaaagtaatggacttcgtattaaaaaactgtgctgattgggtttgtctgtaaaaaatgtcaaatgcatagctcgtaattaaggagctgctacaaaaattggtgcctatgggtgtcatctacaattttttctttaattaacttttagttgttttcactgataatattctctgcactgcagtgcttttttgacaccccagggctcatgttaggccaccatggattacctcatagggatgtcactgttcgtgtagagagtgcctggagctcaattaacctttatgatttattaatagtcttgtttgatgtcaacaggcatcttaaaacgtaagccttggcaaatatttatttttatccttcctttcctcagtattgtctgtcaatcaatgaaatgcagttcttattttatgtagagaccatgataagcacacctctaatcaatttcttcgtgtatgcagccctgacacgcgagttgtcaagttaatcaaacggttgggtgctgaggtaaacccaaatcagaagcgtatattatgcatgaataaggtcgaccttgtggaagacaaaaaagacttgcttaaagttgcaaaggaatttgaagatcttcctgcatatgaaaggttccccttagtctgcaggtgtacttgcattgccttcctaccatttcatctgcctcataaaacaatttcttggaatgttaggtacttcatggtatctggactaaaaggcaaaggggtcaaagaccttgtacagttcttgatggaacaggtattttagtttataaactattcaatggatgttatctctgttgcgtgctgtgacgtcgaacttggtttcttttgatcaatatttaaatcacgtctatgtgctatgtaggcagtgagaagaccttgggatgaggaaccaactacaatgactgaagaggtcatgaaaaccatctcattggaggttgtgcgggagaagatgctggatcacatccaccaagtaaggcttcgtttgtttcatgcccagggaaaaatatttccagtgcacgcaaaacgagaaaactcattagcacatgattaattaaatattaattattgtaaacttgaaaaattgatttatttgattttttaaacaacttctatatagaaattttttgtaagaaatacaccgtttagtagtttgggaagcgtgctaacggaaaatgaggaagttgaagtttatagttggagtatagaacagggcctaattcttggacatattgctactgtgtaattggtactatttgattctgagagaaaattaacaatatgccaccctattggatgtccttataaagatgccactccatagagcataccccttaatctgtttagaggttttttgacagaaatgacacgcgaaatgacaaaagtacccctagctcctttttgcaatgttcgggtcagatttctccctcaaattacagcagcatcaaatacaaatcagttactaccacacagcataaattgcaaatcagttaccacctcgtttagcacacagaagtccaccatacaaataaattgtgcatttagcacacaatagtaaagcatttgcagcacacatcagtatagcatttgcagcccatacaccatagcacgatctgtgctccctcaaattgcagcgcacacaacagtgaagcatttgcagcacataaacaaataaattgcagcaagcacacagcagcacagaggtctccagcagcacatataggcatagtattgcagcacatagcacatagcattccagcacatagcacatagcatattggttacatgaagcatcaaagagacccaaaagaaatacagttcacaagcctaacaaattcagtagttcagtagcttgacaaatacattacagtagttcacatttgacaactaaaatacattaggttgacttcattttcttgggagtcattttttcttggatggtcctgcagaagtactagccatctctctcggctctctagccccttccactccagaagtactggtcactcccaaaagcattgcaagtcgcctatgcatgtatacccaaaagccaagttacacacacaattgatttgaagcatgcacagcaaggagaataattctaacttgtcatttgaccatcaacttacctccttgtaaccattcccgggctttcttgcattattgtagcttcattggttgttctttgtggtgtggaaggttcaggtggaaggttctttttgttgtttttcctaggcttccttttcctgcatatatttatacatataggatgaagtaccacaaatttaaaaggatgtaaagtgaaaaaaacagaaatattaataccttttttttgtaccattcagtgggcacttatagctagcttgcctatgacctttctcaccacatcttttgcatgtaactggacctcttatgattttcttgttcttgccatcactctttgcactactcttgctaccagtctcaaggcatcctttgatcctcaatttcctgtctcccaacactcctcttctctagtggtgcgcccaaatcgaaaggcattttcacctttggccaatgtgacttgtctggcattgccggtatctctctcatatgcagccctgaatttctccactgagtaaaccatatcaacatacccttccaagtcaacatttctctgagttgttaaaaaggccaatggatgcccacagggctgcccggtgtgttgccactcctcacatgtgcatgtgtttgccactattgaaacaacgtgtcttccaaattctttgacatagtcatgcacctctgcagtatgtaagctagctgtgataactttcaagtggcctaatcctcttgttcttgccttcaattggtgcattacagctggtagaatcttaccattaagcctttctccaattctccttctcttatcccatagaaccatcaccttctctctaagcttgtcaactaggtcaacaattggcaaatccttgatatcagaaatccatgcattgaaaacctctgcaatattatttgtaatataatcacacttaattgcggggttgaagccacacctcatccactttaggttatgatatattgtcaaatatttccaaacttcaggagttccattaataatagggaacatgtgcttctggaacacctcttccctataggctcttgctgcagggtacatattaccaaaagtctcaccatggaacttcttagaaaatttttgcgtaagatgccaaaaacattcccttcgttcagcagcagggaacaccttattgactgcattctctaaccccttacatgcatctgaacaaatagcaagaggttctaggtctcctattgccctatgaagctgagtcatgaaccaaacccagttgtcctcggtctcggagtctataaacccaaatgcaactggatacattcaattatgcccatctattgctgtagctgatggcaaaaaaccatgccacttgccatttaaatgggtagcatctacactaaggtatggtctacaaccagccacaaaccccttgatgcaaggactaaatgcagcaaaaaacctatgaaagtatgccctcccatcaactatcttgatgtcaatttctataacacttccaggtgatctcttaaggacctcttccttccaactatacaacaattgaaaactttcctcccaacatccatacaattctttctttgctttctccattccatgccaaactgtatggtaagagagagttaccttgtgatcatcctgcaaccttttcatcaagtctatgcaagacatgtttggtgtagtcttaaggatatcaacagccctatcagcaacccaaccttgtgacggtgtagtagttcttatcctcatgctagatgtacaagtatggtctttgttatgaactgtgacctgcaatagcaatgaaaggtaatccattaaaaccatgcaaacaattctaggcacgctagaagtaatgtcaaaaaaattatgttttgggttagtaccattatagttttatcattctgcctacgcccaacaagactccatgcacatccttcaatagcgcattttaccctatacctctccgggtcagttttcactttgcctagctcaaattccttcttgatagcaaactgtcttacagccaatctgaattccttcattgaggggtacttagtgtatcgatccatacaagggttattcttgtcatagcttataacaagctcacccggtactgaatcatcaacaggaattgctgcaccctcgatgccgtcagtgactccagcagcttcagcagcattacttgaatcatcagctccagcagcattacttgaaccattcgctccagcagcatgcgccgatttttttgccctttcctcatccctcaagcctaggagtacgtataattggtcatcattcatgacctgaatccttccctcatcatctaacgtttcatctatctccaagttatcccaatcaacatactgaaaaggttgctgttctacaccaacagttggagctgctggttctgaaatcaccccatactcaaggcataaaggcacacttgtacaactatctagacattctgaagctagaactgaaactgctgaaatggaacttgtcccatattcaaccaactgcatctctactctagacagttctgaatccaacctaaacgatttgaatcgacaagagaaaaaagcgagttagaaatctaactcgatgaaaatataaaatgtacagcgatatgaaagattttacctcgaggacaaatccttcgagctcatgttgtcaaccttctatttactgtctgagaggagaaagaggccgaggttacattggaggcagaggagcggcgggagtgggggaagggagggcggcgacttctacctaccagggggagcggcggggcggcgggagtgggggaagggagggcggcgaggtggtgagaggggggggggggcagcgacttgtacctagcagaggggggcggcggggaggcgacgctgggccgggtgcacgccgacgcctggtggggggcacggacgggtgaccataacagggagggggtgaccggaggggcggcgtggaaccggcggcgacaaccccgcatgcccgggccggccgagagagaagtatcgagagagagaagagaaagaatctgactctggatctaaacgatatgaaaggggcatttcggtcatttcgcgtgaggagtctgataaaataatataaacaaagtaatcaaaacctctaaacagccaaaagtggcattttatttaggggtatgctctatggagtggcatctttataaggacatcctattgggtggcatattgttaaagccacctctatggagtggcatattgttaattttctcttgattctgatggaattgtctgctatggtatgttcgggtaaatgtatgcaggaaattccttatgtaattgaccatcgtctgatggactggaaggagctaaaagatggttctcttagggtggaacaacacttcattgcaccaaagcaaagccaacgacagattcttgttgggaaaaatggctccaaaatcgggtaacacattctcttatgaagaaactgctctccaccatcttaaaaaaagaaaaaactggtcaccctggcagatggtggttccttttatggagtgcatttgcagttcacttctccaatcaatctcgttccgacagttattcttgtgcatgattggtaaactattaatgcgttatctcatttgtgacaactgtttcaggagaattggtattgaagccaatgaagaattgaggtccatattcaagcgagatgtccatctgatcctccaagttagagttgctaaaaagaggagtgcatgaacagattgtgagtatctctcacttttcattgcatctagtacaatctcatattctgtcagctgttaagatgtcagctttgcttgaaaggctagaaaactaatatttgccagctatcttttgttggaacgtggttactgaacttacagcttagattgtgaccattctgatagtttgggttcttatcgacttgcttaataaaccatatattttgtgatgcagttaaagctcttgtatagacaaccttttcccaatttgggaactcaactgcaagcattcagcgcatgcagcatgctccaacagcgtgtctggatacagcgtgtttgatgactattttgaattgacagcgcctttgccgaatcaagaacatatgcccaagcattcgaaggatgcgtagtaaaatttttccaatgttgcagttgtaaggatttccttctcagatgctgtgggctgcacagcccgagtatgtgtatgttgtgtgcgtgatatagatatatttgtactaggctactgaggccattcgatttttttggttcaaataagttttcccttagcctgtatcctgaaaggtggtttatgcactattgtaatctgacagcaacgtacttacaaagaaatgggtttataaggattgtcttttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0207600, RefSeq:Os08g0207600