Os08g0215200

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Revision as of 12:51, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0215200| Description = En/Spm-like transposon proteins family protein| Version = NM_001067795.1 GI:115475326 GeneID:4344952| Length = 4431 ...")
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Gene Name

Os08g0215200

Description

En/Spm-like transposon proteins family protein

Version

NM_001067795.1 GI:115475326 GeneID:4344952

Length

4431 bp

Definition

Oryza sativa Japonica Group Os08g0215200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:6727269..6731699

Sequence Coding Region

6729537..6731395,6731512..6731699

Expression

GEO Profiles:Os08g0215200

Genome Context

<gbrowseImage1> name=NC_008401:6727269..6731699 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:6727269..6731699 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>caatgtagtgatgcaaatacatcactttatctaaggtgcgaaagcttctcaaagttacgctttctagtcgaattactccacataaaacttcttggtggctggagtgataagagttttgatatgcttcttgatcttcttagagaggctttccctaagggctcaacagtacctaagagcttttatgaagctaggaaaatagtcaagtgtctttcgcttgggtatgatactattcatgcatgcgagaatgactgcgtactgtttaggaagcaatatgccaatgcagatgtctgtccaaaatgcaatacttctcacaggaaaacatccaagaaaagtcttgatgggaagcgtgtccataaagttcctagaaaagtgcttcgctattttcctattgaagagaggcttcaaaaaatgtttatgtccccaaaacttgctaatgatgtacggtggcatgatgaagggcgcacgaaggatggactattgaggcatccagctgactctccagattggaagcattttgataacacatacccagagtttgctgcagatagtcgcaatctcaggctaactttagctactgatggctttaatccatttagattaatgaactgcagttatagcatctggcctgttgtgataattccaatgaatctacctccttggcaatgtatgaagcaaccaaacttcattctttccttattaatccctggtccaaattcacctggaaagaatatggatgtctattttgaaccactagtagatgatatgcatgatatgtttgaggaaggtgtaagaacttatgattcttccaaggacgaatatttccagttgcatgctgccctacaaaaaaccatcactgattttcctgggttaggttatgtctctgcatgtgtaacttcaggaaaagtagcatgccctcattgccactcatatacttgttctattcatttgaaaaatggaggcaagtgttgttacatgggtcatcggaggttcttagatgcaaaccacaagtttaggtttgatgcagcatcattcgatggcaatgtggagttagggacagcaccgaagcctctgaccagagaagagatttttaagcaaacagaagatctacctgcagattttggaaaggacccaaagaagaaaaaaaccaaaccaaatagtaaaggcaaggaaacagaggaaaaaataatatggaataggagatctatctggtttaggttgcgatattggaaggatgtgatgcttccacataattttgatgtaatgcacattgaaaaaaatgtatgtgacaacatcatcaacacactattgggtatcgatgggaaatctaaagataatctgaatgctcgattggatcttaaacttctagatatacggaaatatttgcatcctgtcgaagttggggattcttattatttgcctcctgcacctttctcaatgagttctgaagagaagaaattgttttgtgaagttctgaaacgaatcaaatttcctgatggctatgcctctgatattcgccggcatgtacatgttaaagagaaaaggataattggtctgaaaagtcatgacaaccatatcctcttacaacacttgcttccactagcagtacgaaagacattgccagaatatgttagtgcagtattggttcgtgtgagtaacttctttaagaaaatatactcacctgttatttccataagtgatatggaaaagttagatgctgaaattgctgaaacattaagccttctagagactatatttctaccagccttttttgatattatggttcacttaatggctcatcttcctacccaagtaaggatttctggcccagttcagtacagcaacatgtatccaatagaaaggtttctaatgaggttaaagggatatgtacgcaccaagagtcatcctgagggatcaattgctgaaggctatttgtttgatgagagtcttacattttgctctcgttatttagaaggatgtgaaactaggttctctcgaaaatccagaactagtatagataaaccaagctcaattaccatgccattcttct</cdnaseq>

Protein Sequence

<aaseq>QCSDANTSLYLRCESFSKLRFLVELLHIKLLGGWSDKSFDMLLD LLREAFPKGSTVPKSFYEARKIVKCLSLGYDTIHACENDCVLFRKQYANADVCPKCNT SHRKTSKKSLDGKRVHKVPRKVLRYFPIEERLQKMFMSPKLANDVRWHDEGRTKDGLL RHPADSPDWKHFDNTYPEFAADSRNLRLTLATDGFNPFRLMNCSYSIWPVVIIPMNLP PWQCMKQPNFILSLLIPGPNSPGKNMDVYFEPLVDDMHDMFEEGVRTYDSSKDEYFQL HAALQKTITDFPGLGYVSACVTSGKVACPHCHSYTCSIHLKNGGKCCYMGHRRFLDAN HKFRFDAASFDGNVELGTAPKPLTREEIFKQTEDLPADFGKDPKKKKTKPNSKGKETE EKIIWNRRSIWFRLRYWKDVMLPHNFDVMHIEKNVCDNIINTLLGIDGKSKDNLNARL DLKLLDIRKYLHPVEVGDSYYLPPAPFSMSSEEKKLFCEVLKRIKFPDGYASDIRRHV HVKEKRIIGLKSHDNHILLQHLLPLAVRKTLPEYVSAVLVRVSNFFKKIYSPVISISD MEKLDAEIAETLSLLETIFLPAFFDIMVHLMAHLPTQVRISGPVQYSNMYPIERFLMR LKGYVRTKSHPEGSIAEGYLFDESLTFCSRYLEGCETRFSRKSRTSIDKPSSITMPFF </aaseq>

Gene Sequence

<dnaseqindica>2269..4127#4244..4431#gcgccgcacccgcgattccccatccacccacaccaccgcacgctgcctcccacaccccgcgattcccacaccccgcgccgccgtcctcctcctgcgccgccgtcctcctcctgctgaccccgccaccgccggagcccgacctcgacgagcccgaccccgacgcctcccctcctccgacgagcccgaccccgatgcctaccctcctccgacgagcccgaccacgatgcctcctgcagatccgcgccgactccacacgccgccgtcctcctctacttctccatcgactcctcctccggccggccggcttccgctgtcggctcctccctcttccccaatgccttcccatcgctgcagttgagtccaccctcttccccacctcctccgccgcctcctcaacctccaggtttaggtaagaatcaaatccccttgtttatgagtgtgattttttttgtctcatagatggatgtgtgtgtgtttttctttttacaaccctgcctataagctgtatgtccaccctgtgatttactcaatttgtctgcatattggtgcttgcgtgatggatttggaggggaatttgtagcaattagttgcttagaaatcgagggtaactgagtgaccagcttgcttgttctttactttaacgaattttgcaccgattgcaatcagaatgtgtttcgggtgttagaattgggagaatgacaatgacagtgtaacaatgtaaatcttggtatgaatggacaatgatctgattgatctaaaaataacaactgacgacggtgaatacagtgtgctatgtaaacttcaaaagtgaatacaatggccacctgtgctttcagtatacactacattactccttgaagatatttttgtgtgattcttaaaggctctttgttctttttatttttgtgtgatattaaccgttggttcaacactgatgctgccatcaccttttgccaatttaatatagacgagccctgcagtgagcttcatagtggcactctgttcagatccattgctaagacattttaaaaccaccttactgttgaaagttagtgctactgaaagtctgaaactatggaatatattaaaatataggcatcatgtgaggtagttgtgagtctggtacgtcatgacctgtgcaaaggtaagtagtatgtgttctactagtatattttgtgaagttagtgtcggtgtcaaataatagtaatatttcatctctatctgacatcctgaacccaatcctttcaaccatgagataaagcagacatcatttggtgctttaggctttgattttattccacatcatttgtacagatattgatttgcaaattattttagcacatttgatttggaaatgggcaatcacttaactgttctagcactctttacctagattgatatcttgggagtttcttgaaattattaacgcaagcatttaattttaagtcagcattataatttgtttctaaatgtgaactatttggctttatggtgcagtttagtggtccactatcgattttgctgcaatcaacctacgttgttgagcatctacccagcaggacatctcaagaaaaacttcgtaccacggttagtatcaaccaacttgccatcagtactgtgcttaaaggctaaaatgctatatctatgtgttatgtttgttttgtgcaatgtctttttatactttttcccatgagcacaatggcatgtacttgacgcgcagaaaacaccactgaaacacataataatttaggcgacctgtgaaatttgattgtcaatatcagctatggataagagatggatggaccttcctaggtacaattctacctaataattaatgtggcgcaatgtgtttttttttccattcattcatctttctctaaactttcaaaaaaaactataggcacacatctgaatacatacaaggggtcaacgaatttatacaatatgcttttacccattcagcaaaagagaacacaatactatgcccttgcaagaagtgtgtgaatggttgttggaaggaagctagtgaaatctatgtccatttaatatgtgatgggtttttagatgggtataagacatggatatttcatgtagaggcatcgtcttcctttgctcaatatggtgaagcaccagcctcttttcctgagcaaactttgatgagattatgagacaagatagtagttcagaggaagctaatgagatgtttgatatgcttcatgatgttgctcatggattagatatggggaatttggatagaaatgacgatgacaatgtagtgatgcaaatacatcactttatctaaggtgcgaaagcttctcaaagttacgctttctagtcgaattactccacataaaacttcttggtggctggagtgataagagttttgatatgcttcttgatcttcttagagaggctttccctaagggctcaacagtacctaagagcttttatgaagctaggaaaatagtcaagtgtctttcgcttgggtatgatactattcatgcatgcgagaatgactgcgtactgtttaggaagcaatatgccaatgcagatgtctgtccaaaatgcaatacttctcacaggaaaacatccaagaaaagtcttgatgggaagcgtgtccataaagttcctagaaaagtgcttcgctattttcctattgaagagaggcttcaaaaaatgtttatgtccccaaaacttgctaatgatgtacggtggcatgatgaagggcgcacgaaggatggactattgaggcatccagctgactctccagattggaagcattttgataacacatacccagagtttgctgcagatagtcgcaatctcaggctaactttagctactgatggctttaatccatttagattaatgaactgcagttatagcatctggcctgttgtgataattccaatgaatctacctccttggcaatgtatgaagcaaccaaacttcattctttccttattaatccctggtccaaattcacctggaaagaatatggatgtctattttgaaccactagtagatgatatgcatgatatgtttgaggaaggtgtaagaacttatgattcttccaaggacgaatatttccagttgcatgctgccctacaaaaaaccatcactgattttcctgggttaggttatgtctctgcatgtgtaacttcaggaaaagtagcatgccctcattgccactcatatacttgttctattcatttgaaaaatggaggcaagtgttgttacatgggtcatcggaggttcttagatgcaaaccacaagtttaggtttgatgcagcatcattcgatggcaatgtggagttagggacagcaccgaagcctctgaccagagaagagatttttaagcaaacagaagatctacctgcagattttggaaaggacccaaagaagaaaaaaaccaaaccaaatagtaaaggcaaggaaacagaggaaaaaataatatggaataggagatctatctggtttaggttgcgatattggaaggatgtgatgcttccacataattttgatgtaatgcacattgaaaaaaatgtatgtgacaacatcatcaacacactattgggtatcgatgggaaatctaaagataatctgaatgctcgattggatcttaaacttctagatatacggaaatatttgcatcctgtcgaagttggggattcttattatttgcctcctgcacctttctcaatgagttctgaagagaagaaattgttttgtgaagttctgaaacgaatcaaatttcctgatggctatgcctctgatattcgccggcatgtacatgttaaagagaaaaggataattggtctgaaaagtcatgacaaccatatcctcttacaacacttgcttccactagcagtacgaaagacattgccagaatatgttagtgcagtattggttcgtgtgagtaacttctttaagaaaatatactcacctgttatttccataagtgatatggaaaagttagatgctgaaattgctgaaacattaagccttctagagactatatttctaccagccttttttgatattatggttcacttaatggctcatcttcctacccaagtaaggatttctggcccagttcagtacagcaacatgtatccaatagaaaggtaatattcaaaaacaaactatgagtattgtataactacacacacacacacacacacacacatatatatatatatataatgtgaatataatctgctgttgtattaattctatgtaggtttctaatgaggttaaagggatatgtacgcaccaagagtcatcctgagggatcaattgctgaaggctatttgtttgatgagagtcttacattttgctctcgttatttagaaggatgtgaaactaggttctctcgaaaatccagaactagtatagataaaccaagctcaattaccatgccattcttct</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0215200, RefSeq:Os08g0215200