Os08g0216000

From RiceWiki
Revision as of 12:51, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0216000| Description = Protein of unknown function DUF594 family protein| Version = NM_001188511.1 GI:297726152 GeneID:9269092| Length = 17...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os08g0216000

Description

Protein of unknown function DUF594 family protein

Version

NM_001188511.1 GI:297726152 GeneID:9269092

Length

1779 bp

Definition

Oryza sativa Japonica Group Os08g0216000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:6744849..6746627

Sequence Coding Region

6744849..6745255,6745363..6745857,6746195..6746627

Expression

GEO Profiles:Os08g0216000

Genome Context

<gbrowseImage1> name=NC_008401:6744849..6746627 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:6744849..6746627 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagaagggctacagcacattaggggaaacccacccactggctttcttgtgggcgcccttcctcttgattcatcttggtgggcaggacaccatcactgcattctccatggaggacaacaacctgtggttgaggcatctactgaacttggtagttcaggtgaccctagccatgtatgtattctggaagtcaactagttggcacaaaaatgtgcagcttcttgttcccggtgtcttcttgtttactgctggaattatcaagtatggagagcggacagtggctctcatgtatgggaaactaaacaacggcatgacatccaacattaaaattagtaaggagaggatctcagaactgaccgagcatgatgtttaccaggaacttgtttgttctgttctaaacatgcaaaaagtcacaaatacattgtttggaagaatgctgctagcttcacctcggacatggtggtggctgaaggatggaggatacgataggctatctcgcatatcatggtattttgttggaaggctgaagagaaggccactgtggtcaaataaaatgggccagtacaacttgctaagttcatacttgggcatgtatgacgagttagcagttacagcgccccaacgactgatgagaatgatgaggaagatggcgagaggagtcggtgttggaggcaaggtgatgaacaagaagctattttgggtgagcacgctgctggagaccaggtatgaggtggtggacaacgatttgatggagtgtgtcatgtgtgagattaaaaagcttggatcatctcaaaggattattaatcggcggtggacgcacttggagccatttgtcaaggagatagaagggatgttgctcctcacattttcttcaaccataattgtgctgcacacaatcacaatggcttacttgatgaagagtaatgcaaatgctgtatccacgctgcagagcggaattgcaaatagtgttggactttcattatcgtatctaaataaggaaatccttgaccacaacgtggatatctccctcagtactctcatagagagattgaaaaatgcacctgttgaatttccttggaggactcagcacgagcagcacgaggcggttctcgaggagttgagagacatttggatgaggctcctcatctacaccgccggcaagtccaggccggagggacacgccgcgcatctggccaaaggaggggaactcctcacattcgtctggctatacatggcatccatgggtgttggggatggcgtggcacagcctatcgagacttcaacctcatctcgagatgcctctggactcagtataatcagcatcttcgatctctaa</cdnaseq>

Protein Sequence

<aaseq>MKKGYSTLGETHPLAFLWAPFLLIHLGGQDTITAFSMEDNNLWL RHLLNLVVQVTLAMYVFWKSTSWHKNVQLLVPGVFLFTAGIIKYGERTVALMYGKLNN GMTSNIKISKERISELTEHDVYQELVCSVLNMQKVTNTLFGRMLLASPRTWWWLKDGG YDRLSRISWYFVGRLKRRPLWSNKMGQYNLLSSYLGMYDELAVTAPQRLMRMMRKMAR GVGVGGKVMNKKLFWVSTLLETRYEVVDNDLMECVMCEIKKLGSSQRIINRRWTHLEP FVKEIEGMLLLTFSSTIIVLHTITMAYLMKSNANAVSTLQSGIANSVGLSLSYLNKEI LDHNVDISLSTLIERLKNAPVEFPWRTQHEQHEAVLEELRDIWMRLLIYTAGKSRPEG HAAHLAKGGELLTFVWLYMASMGVGDGVAQPIETSTSSRDASGLSIISIFDL</aaseq>

Gene Sequence

<dnaseqindica>1373..1779#771..1265#1..433#atgaagaagggctacagcacattaggggaaacccacccactggctttcttgtgggcgcccttcctcttgattcatcttggtgggcaggacaccatcactgcattctccatggaggacaacaacctgtggttgaggcatctactgaacttggtagttcaggtgaccctagccatgtatgtattctggaagtcaactagttggcacaaaaatgtgcagcttcttgttcccggtgtcttcttgtttactgctggaattatcaagtatggagagcggacagtggctctcatgtatgggaaactaaacaacggcatgacatccaacattaaaattagtaaggagaggatctcagaactgaccgagcatgatgtttaccaggaacttgtttgttctgttctaaacatgcaaaaagtcacaaatacattgtttggaagaagtacagatataactgatgaatttagaaaatgtttaattgacacataaaacactgttagttcacttgatcacagcctggtgtccaagttgttggatgttgagcttagtctcatgtacaatgatatgtataccaaggctacaatattgctacacagacacaaggagtggcattgtaacacggtgcatctctcaggtatctacctttgctgctcttgtggtttttgctgtcatgagcaagaaagaagcagcgagcagattacacagtagtgttgatgttgggatcacctacgccttatttattggaagtatccttctagatgtttgtgctttgtttacagtgctgctagcttcacctcggacatggtggtggctgaaggatggaggatacgataggctatctcgcatatcatggtattttgttggaaggctgaagagaaggccactgtggtcaaataaaatgggccagtacaacttgctaagttcatacttgggcatgtatgacgagttagcagttacagcgccccaacgactgatgagaatgatgaggaagatggcgagaggagtcggtgttggaggcaaggtgatgaacaagaagctattttgggtgagcacgctgctggagaccaggtatgaggtggtggacaacgatttgatggagtgtgtcatgtgtgagattaaaaagcttggatcatctcaaaggattattaatcggcggtggacgcacttggagccatttgtcaaggagatagaagggatgttgctcctcacattttcttcaaccataattgtgctgcacacaatcacaatggcttacttgatgaagagtaatgcaagtgagaagtcaacggaattgagtgcctccgccgcctctttagtcaacgtctgtcggaagctatctaattatatgataattatatgatgtactttgttgtgcgcacagatgctgtatccacgctgcagagcggaattgcaaatagtgttggactttcattatcgtatctaaataaggaaatccttgaccacaacgtggatatctccctcagtactctcatagagagattgaaaaatgcacctgttgaatttccttggaggactcagcacgagcagcacgaggcggttctcgaggagttgagagacatttggatgaggctcctcatctacaccgccggcaagtccaggccggagggacacgccgcgcatctggccaaaggaggggaactcctcacattcgtctggctatacatggcatccatgggtgttggggatggcgtggcacagcctatcgagacttcaacctcatctcgagatgcctctggactcagtataatcagcatcttcgatctctaa</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0216000, RefSeq:Os08g0216000