Os08g0224700
| Gene Name |
Os08g0224700 |
|---|---|
| Description |
Similar to 26S proteasome subunit RPN2a |
| Version |
NM_001067813.1 GI:115475362 GeneID:4344971 |
| Length |
5380 bp |
| Definition |
Oryza sativa Japonica Group Os08g0224700, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:7590567..7595946 |
| Sequence Coding Region |
7590673..7590824,7591767..7591936,7592034..7592148,7592234..7592402,7592532..7592666 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:7590567..7595946 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:7590567..7595946 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcggcggcggcggtgatggtgagctcggcgagcgggctgctggcgatgctgcaggagccggcggcggagctcaagctgcacgcgctcgccaacctcaactccctcgtccacgtcttctggcccgagatctccaccagcgtccccgccattgagagcttatatgaagatgaggaattcgaccagaggcagttggcagcattggttgtttccaaggtgttttactaccttggtgaattagatgattctctgtcttacgcactcggtgctggaccactatttgatccctccgagggttcagactatgctcaaacacttttagcaaaagctttagatgaatatgccagcatccgatcgaagtccttgaaagcagcaggtgaaggggatgaaaaaatggacccaagattggaggcaattgtagagagaatgctggataagtgtatacttgatggaaaatatcaacaggccatgggtatgtctcttgaatgcaagagacttgataagctagaggaagcgatatctcgatccgataatcttaatggatctctttcttattccatcattctatctcatcaatatgttagtcaccgtgaatatcgctgtgagattctccgatgtcttgtaaaaatataccagacactgccaaatccggattacttaagcatttgccagtgtcttatgttcttgggtgagcctgaaactgttggaaacatcttgggcaagctgctttctggaagcaaggatgatgctctccttgcattccaaattgcttttgatcttgttgaaaatgaaaaccaggccttcctcctgaatgtgaaaaatcaccttgacacgctgagtttgcagacttctgcccagactttacctagcgatcaaactgctgctacagaaccatctggagatgcccaaatgacggatgatgctatcacaccaaatggaaatgcgcacactgtagatccaaatgaagtagcgcacgctgataggctgaccaaaattaaggggatactgtcaggggagacgtctattcagttgacattgcagtttttatacagtcataataggtctgatcttctgattttgaagactataaaacaagctctggaaatgaggaatagtgtttgtcatagtgcaactatatgttccaatgcaatcatgcatgcaggaacaacagttgataccttcctaagagaaaacttggaatggctaagtagggcaaccaactgggctaagttcagtgcaactgctggattaggtgtcattcatagaggccatctcacacaaggcagagctttaatggccccataccttcctcagagtggtgctgcaagtggtggtagtccatattctgaaggtggtgccctttatgctctgggtctgatccatgcaaaccatggtgaaggaatcaaacaatttcttcgtgagagccttcgcaacactagttctgaggtcgttcagcatggtgcttgtctgggacttggacttgcagctttaggcacagccgacgaggaaatatttgaggatgtaaagaatattctttacactgacagtgctgtggctggtgaggctgctggcattggcatgggcttgcttatggctggaacagccagtgagaaggctggagagatgcttgcctatgcacatgatacacagcatgagaaaattattcggggcttgtcacttggaattgcattgacagtttatggcagggaagaggaagctgacaccttgattgaacaaatgactagagatcaagatcccatactccgttatggtggtatgtacgcattggctctagcgtacaggggaactgcaaataacaaagctatccaccagcttcttcattttgcggtgtcagatgtgagcgacgatgtccggaggactgcagtattggctcttggttttgtcctgtacaatgagcctgagcagactccaagaattgtgtctctgctctctgaatcatataatccgcatgtccgttatggtgccgctttagctgttggaatatcctgtgcaggaacaggattaagtgatgccatctccttgttggagcctcttacatctgatgttgttgacttcgtgcggcaaggtgctctcattgcaatggcaatggtcatgatccaaactaatgaatcatatgactctcgtgttggaacattcaggcgtcagttggaaaagatcattctcgacaagcatgaggacaccatgagcaaaatgggtgccataatggctactggtatccttgatgctggtggtaggaacgttaccatcaggcttcagtccaggtcaaagcatgacaagctgactgctgttgttggccttgccgtcttcacccagttctggtattggtacccgctgacatatttcatcagcctggccttctctccgacggcttttattggcctcaactctgacttgaaagtgccgaagtttgagttcctgtcaaacactaaaccatcgctctttgattacccaaagccgacaacccaacaaaccacgactgcttcagttaagctgcctacggccatcctatcaacatatgccaaggcaaaatctagggcaaagaaggaagccgaaagcaaagctcaggagaaagcagaagcaccaccaagtgaagatgcttctacttcaatgcaggtcgatggtgtggcggagaagaaagcccctgagcccgaaccgaccttccagatcctgactaacccggcccgggttgtcccggcccaggagaagttcataaaattcctggagggcggcaggtacgagcctgtgaagctggcgccctccggatttgtcctcctacgggacctcaagcccaccgagacggaggaactagtcctcaccgacgccccggcaactcaggcgacgaacgccgcagccgccaccgctggccagcaaggctcaggcgccgccgccatggccgtcgacgaggagcccctgccaccccagccatttgagtacacctcgtga</cdnaseq> |
| Protein Sequence |
<aaseq>MAAAAVMVSSASGLLAMLQEPAAELKLHALANLNSLVHVFWPEI STSVPAIESLYEDEEFDQRQLAALVVSKVFYYLGELDDSLSYALGAGPLFDPSEGSDY AQTLLAKALDEYASIRSKSLKAAGEGDEKMDPRLEAIVERMLDKCILDGKYQQAMGMS LECKRLDKLEEAISRSDNLNGSLSYSIILSHQYVSHREYRCEILRCLVKIYQTLPNPD YLSICQCLMFLGEPETVGNILGKLLSGSKDDALLAFQIAFDLVENENQAFLLNVKNHL DTLSLQTSAQTLPSDQTAATEPSGDAQMTDDAITPNGNAHTVDPNEVAHADRLTKIKG ILSGETSIQLTLQFLYSHNRSDLLILKTIKQALEMRNSVCHSATICSNAIMHAGTTVD TFLRENLEWLSRATNWAKFSATAGLGVIHRGHLTQGRALMAPYLPQSGAASGGSPYSE GGALYALGLIHANHGEGIKQFLRESLRNTSSEVVQHGACLGLGLAALGTADEEIFEDV KNILYTDSAVAGEAAGIGMGLLMAGTASEKAGEMLAYAHDTQHEKIIRGLSLGIALTV YGREEEADTLIEQMTRDQDPILRYGGMYALALAYRGTANNKAIHQLLHFAVSDVSDDV RRTAVLALGFVLYNEPEQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGLSDAISLL EPLTSDVVDFVRQGALIAMAMVMIQTNESYDSRVGTFRRQLEKIILDKHEDTMSKMGA IMATGILDAGGRNVTIRLQSRSKHDKLTAVVGLAVFTQFWYWYPLTYFISLAFSPTAF IGLNSDLKVPKFEFLSNTKPSLFDYPKPTTQQTTTASVKLPTAILSTYAKAKSRAKKE AESKAQEKAEAPPSEDASTSMQVDGVAEKKAPEPEPTFQILTNPARVVPAQEKFIKFL EGGRYEPVKLAPSGFVLLRDLKPTETEELVLTDAPATQATNAAAATAGQQGSGAAAMA VDEEPLPPQPFEYTS</aaseq> |
| Gene Sequence |
<dnaseqindica>107..258#1201..1370#1468..1582#1668..1836#1966..2100#2190..2509#2773..2908#3005..3253#3348..3568#3687..3945#4045..4752#4876..5205#gagctcttcttcttcccctcctccaagcaaaaggcaaaaaaagccgaagcagcgccgacgagacgagcatccaaatcgtcgaatccagcggcggcggaggcgggagatggcggcggcggcggtgatggtgagctcggcgagcgggctgctggcgatgctgcaggagccggcggcggagctcaagctgcacgcgctcgccaacctcaactccctcgtccacgtcttctggcccgagatctccaccagcgtccccgccatgtgagttgctccacccccacccaccttcagctgtagttttccctccccgccggcccgctgcgcccgatgcggcgtttcgcgcgattcggttcgattcgtggagtggggggttggggtttggtgctctatgtatgtgatgatgatgatttggatgagaggtggggttcggctaggaaggtgccgtgtggagggaggattcatgcgattagtgtcgtttggcctggttagattcgatctggcgatttttttggatgaaccctaggttggtttgatctgttaggctggagatttcgggaggggattataatgggcggttagtttcactggtactagaaaacctaggctttgtgtatggattatagataactcaaacttccctaactgttgtggttcattcatgtattattcttcgaggagttgctgtggtcgagaaaaaatattaattttttaaaaataatttgcgtttaggctcggattgccaaggcttttgtttgaagggttctaatgaagcataattttaatctgaaaacgagcaggtggagcctaggttgagacttctttttttctgtttattatggttggtttgaggaatatgcataatccttgactttgaagtgtctgaattgcaagactatacgcaggaacattttgtttgatctttagcgcttgtcctgtcaagtaaaaacattgagctaagacatgtgtcgtctcgtttcttgtttatgatttgttcatgggatttaatgggagctagatacattggaagaggcatgtccattaaatgttttggcagttgcaatttggtattatagtttctggaaattatgttctttattcattgtcacttaataacttggtagaacttaatattttcaaggacttctctattaagcatgaagtgtttctggttacttattttataatgttatatacttgttacagtgagagcttatatgaagatgaggaattcgaccagaggcagttggcagcattggttgtttccaaggtgttttactaccttggtgaattagatgattctctgtcttacgcactcggtgctggaccactatttgatccctccgagggttcagactatgctcaaacacttttaggtgaggaattgactaaattcattgcaatcttcttattttcatgttccaaagaaacaatattgacatagttttaaaatttgtttgttcctttcttcagcaaaagctttagatgaatatgccagcatccgatcgaagtccttgaaagcagcaggtgaaggggatgaaaaaatggacccaagattggaggcaattgtagagagaatgctggataagtatgatagaatcctcttatatcttctagtagctcatctgtaattaaatgcagttctcatctcattgatgcggaaactgtttcaggtgtatacttgatggaaaatatcaacaggccatgggtatgtctcttgaatgcaagagacttgataagctagaggaagcgatatctcgatccgataatcttaatggatctctttcttattccatcattctatctcatcaatatgttagtcaccgtgaatatcgctgtgaggtaagattacatcatggcagatttcaattgtaaagtctgtctcttagatttcttattggtatatacagcattcttcataaattttggaatgccataaaatgaccaagaacttatgtttgatctattcagattctccgatgtcttgtaaaaatataccagacactgccaaatccggattacttaagcatttgccagtgtcttatgttcttgggtgagcctgaaactgttggaaacatcttgggcaagctgctttctggaagcaaggtatgctggaaatatcttgtgtttttttttagttgtttaactgctgcttagtgtgtttatttgtcctaacatgtgcttttgctctacaggatgatgctctccttgcattccaaattgcttttgatcttgttgaaaatgaaaaccaggccttcctcctgaatgtgaaaaatcaccttgacacgctgagtttgcagacttctgcccagactttacctagcgatcaaactgctgctacagaaccatctggagatgcccaaatgacggatgatgctatcacaccaaatggaaatgcgcacactgtagatccaaatgaagtagcgcacgctgataggctgaccaaaattaaggggatactgtcaggggagacgtctattcagttgacattgcagtttttatacagtcataataggtactacctctgtcccaaaatatagccatttctagaatagtaccttgtctcaaaataaagttatttctccaactacctcctctcaaccaatcacacattttctccatcattcccacctactttcttaatatccgtgccaacctcaaaaatgctttacactttggcacggaggaagtaatgtgataatatctgacaaaattattgcagctggtcatgcatttaagttttgaatcttatgttgattttggtaattgatttgacaggtctgatcttctgattttgaagactataaaacaagctctggaaatgaggaatagtgtttgtcatagtgcaactatatgttccaatgcaatcatgcatgcaggaacaacagttgataccttcctaagagaaaacttggtacatttcatagtttacctatttgttaatgcagttctatgctcatgcatttttctccctttctgatcttcatttgcatataaccatctgttacaggaatggctaagtagggcaaccaactgggctaagttcagtgcaactgctggattaggtgtcattcatagaggccatctcacacaaggcagagctttaatggccccataccttcctcagagtggtgctgcaagtggtggtagtccatattctgaaggtggtgccctttatgctctgggtctgatccatgcaaaccatggtgaaggaatcaaacaatttcttcgtgagagccttcgcaacactagttctgaggtattttttcagggtcatggtctcttattttgtttagacagtccctatcactgtcatgaaaaaatattctaaactttcaaatattattgtacaggtcgttcagcatggtgcttgtctgggacttggacttgcagctttaggcacagccgacgaggaaatatttgaggatgtaaagaatattctttacactgacagtgctgtggctggtgaggctgctggcattggcatgggcttgcttatggctggaacagccagtgagaaggctggagagatgcttgcctatgcacatgatacacagcatgagaaaattattcggtaactattttttaaactcttggcaagcaagttcccactgtaatctagtactaggaatttgtttctcaagacggtaaatatgttcatgttctgatacactgactcctcttttctccaggggcttgtcacttggaattgcattgacagtttatggcagggaagaggaagctgacaccttgattgaacaaatgactagagatcaagatcccatactccgttatggtggtatgtacgcattggctctagcgtacaggggaactgcaaataacaaagctatccaccagcttcttcattttgcggtgtcagatgtgagcgacgatgtccggaggactgcagtattggctcttggttttgtcctgtacaatgagcctgagcaggttagctttaccttattgattctttttattgtcaagattcttgtttgatttgagtcacttaatttgagcctgacttgcctagaattattttcaatgcagactccaagaattgtgtctctgctctctgaatcatataatccgcatgtccgttatggtgccgctttagctgttggaatatcctgtgcaggaacaggattaagtgatgccatctccttgttggagcctcttacatctgatgttgttgacttcgtgcggcaaggtgctctcattgcaatggcaatggtcatgatccaaactaatgaatcatatgactctcgtgttggaacattcaggcgtcagttggaaaagatcattctcgacaagcatgaggacaccatgagcaaaatgggtgccataatggctactggtatccttgatgctggtggtaggaacgttaccatcaggcttcagtccaggtcaaagcatgacaagctgactgctgttgttggccttgccgtcttcacccagttctggtattggtacccgctgacatatttcatcagcctggccttctctccgacggcttttattggcctcaactctgacttgaaagtgccgaagtttgagttcctgtcaaacactaaaccatcgctctttgattacccaaagccgacaacccaacaaaccacgactgcttcagttaagctgcctacggccatcctatcaacatatgccaaggcaaaatctagggcaaagaaggaagccgaaagcaaagctcaggagaaagcagaagcaccaccaagtgaagatgcttctacttcaatgcaggtaagagctacagtgctaactacctaccttgttccttttttgccaccttgttcatgtctttgctacacaatgacatgttatagtctccaaattactcatgctggtctcaatccatgaattcaggtcgatggtgtggcggagaagaaagcccctgagcccgaaccgaccttccagatcctgactaacccggcccgggttgtcccggcccaggagaagttcataaaattcctggagggcggcaggtacgagcctgtgaagctggcgccctccggatttgtcctcctacgggacctcaagcccaccgagacggaggaactagtcctcaccgacgccccggcaactcaggcgacgaacgccgcagccgccaccgctggccagcaaggctcaggcgccgccgccatggccgtcgacgaggagcccctgccaccccagccatttgagtacacctcgtgatcccttgatgatcccagggctaaacacttgtactgtttgtttctaacttggtagccatgatggaatcaaatgtttctttcacaaagcttatgaattgattctttccattgatttactggtttagtgtgtggaaaaattgttggtattagtcaccagagtaaaatatttcacctgc</dnaseqindica> 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| External Link(s) |
