Os09g0417800

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Revision as of 07:25, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0417800| Description = WRKY transcription factor 62| Version = NM_001069720.1 GI:115479182 GeneID:4347070| Length = 1946 bp| Definition = ...")
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Gene Name

Os09g0417800

Description

WRKY transcription factor 62

Version

NM_001069720.1 GI:115479182 GeneID:4347070

Length

1946 bp

Definition

Oryza sativa Japonica Group Os09g0417800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:15646654..15648599

Sequence Coding Region

15646759..15647175,15647705..15647827,15647922..15648254,15648388..15648471

Expression

GEO Profiles:Os09g0417800

Genome Context

<gbrowseImage1> name=NC_008402:15646654..15648599 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:15646654..15648599 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgacgacggcgacggctcatcgtcaccgaccgacgacagcgccgccgccgggcttttgccgctcttcagccgatcgccggccgaggatcttgaggagaagctgaggcgggcgatggaggagaacgcgcggctgacgcgagcgctcgacgccattctggccggtcaccacgcccaccagcgcgcgctcttggcgccgtcgctgtcgccgccgccgccttccgccacagcaagggcgccgagcgtgtccaccagctgcgcggcgagggaggacgccgcaccggcggtcgccgccgccgccgcgtcgacggcatgtccgtcgagacagcagccgccgaccgcggagccacggcccaaggtcaggacggtccgcgtgcgcgccgacgccgccgacgccaccgacgccaacagcatggcggagaccgtgaaggatgggtaccaatggaggaagtacgggcagaaggtgacgcgtgacaacccctaccctagagcttacttccgctgcgcattcgcgccgtcttgccccgtcaagaagaagctccaaagatgtgcggaggataggtcaatgctagtggcgacctacgagggagaacacaaccatgccctgtccacgcagacaaccgaattcgtcgccagcggctgcactacgagccagcacgccggggggtcgtcgtcgtcgccgctgccgtgctccatctccatcaactcgtcgggccgcacgatcacactcgacctgacgaaccaagcagggtccggatcgatcgcgagctgcggcgtcgaggcggccgccgtctccggcgagctcgtcacggtgctctcgccggagttgaggaggcacctcgtggaggaggtggtgcaagtgctcaagaacgacgccgagttcgtggaggccgtgaccaacgccgtggccgctagagttgtggatcaaatcccacacattcctgttcatttgtag</cdnaseq>

Protein Sequence

<aaseq>MDDDGDGSSSPTDDSAAAGLLPLFSRSPAEDLEEKLRRAMEENA RLTRALDAILAGHHAHQRALLAPSLSPPPPSATARAPSVSTSCAAREDAAPAVAAAAA STACPSRQQPPTAEPRPKVRTVRVRADAADATDANSMAETVKDGYQWRKYGQKVTRDN PYPRAYFRCAFAPSCPVKKKLQRCAEDRSMLVATYEGEHNHALSTQTTEFVASGCTTS QHAGGSSSSPLPCSISINSSGRTITLDLTNQAGSGSIASCGVEAAAVSGELVTVLSPE LRRHLVEEVVQVLKNDAEFVEAVTNAVAARVVDQIPHIPVHL</aaseq>

Gene Sequence

<dnaseqindica>1425..1841#773..895#346..678#129..212#aaagttcacgttttggtccccctcctgttcggcgacgggcgacgtacggcgccactataagaaacgtgccctattgctgtcacgccgtacttcctcccgcccaccgggcagctagcttagctgccgccatggacgacgacggcgacggctcatcgtcaccgaccgacgacagcgccgccgccgggcttttgccgctcttcagccgatcgccggtctgtccgtccatcgatatgatcgatcgatctttgcgtgtcgtcgtcaatggctgatttggattgttggttgttaattcgaacatgtgtgatgtgattgcgcgtgggtgtggtggctggggagtgtgtacaggccgaggatcttgaggagaagctgaggcgggcgatggaggagaacgcgcggctgacgcgagcgctcgacgccattctggccggtcaccacgcccaccagcgcgcgctcttggcgccgtcgctgtcgccgccgccgccttccgccacagcaagggcgccgagcgtgtccaccagctgcgcggcgagggaggacgccgcaccggcggtcgccgccgccgccgcgtcgacggcatgtccgtcgagacagcagccgccgaccgcggagccacggcccaaggtcaggacggtccgcgtgcgcgccgacgccgccgacgccaccgacgccaacagcatggtaaaactcgatcgaacactttgaatgcattgccatggcgctcgatttcgagcatgatctggactgaatcttttccccttcctggcatcgccaggcggagaccgtgaaggatgggtaccaatggaggaagtacgggcagaaggtgacgcgtgacaacccctaccctagagcttacttccgctgcgcattcgcgccgtcttgccccgtcaagaagaaggtacagaagcaagagaaatgaacataacagaaaatgattgcattttttcgagtaatcttactatgcgcacgaggtttcaaattttacaataaaaaatttaattgcctttctggttatataatttttcaaatttcaatttacaatgaaccgaaattaccgacagctccctctcttaggagtgacgaattttcagagttgttaaaaaaagttacaagcttacccgtaaaaagcatatgttaaacaacctatggtaaacggatcctcgtgtacggggtatcaaccttaaaatctcgggttatttgtggctttgacttagatttcttcttagcttaaaaaaggctgtggggatacatttttccccatccatcgagtttttattataagttttatttccgaaaacatgtacgccctccgtctccaaaataaaaacagtatagaaggggatgtgacccttatgttggttttttttagaacggagggagttcagtttattgctgaattttgacctcgggctctatgttatatgtagctccaaagatgtgcggaggataggtcaatgctagtggcgacctacgagggagaacacaaccatgccctgtccacgcagacaaccgaattcgtcgccagcggctgcactacgagccagcacgccggggggtcgtcgtcgtcgccgctgccgtgctccatctccatcaactcgtcgggccgcacgatcacactcgacctgacgaaccaagcagggtccggatcgatcgcgagctgcggcgtcgaggcggccgccgtctccggcgagctcgtcacggtgctctcgccggagttgaggaggcacctcgtggaggaggtggtgcaagtgctcaagaacgacgccgagttcgtggaggccgtgaccaacgccgtggccgctagagttgtggatcaaatcccacacattcctgttcatttgtagttgttttttttttctctttgagaacgttgatttgtagtttgtaggcagtatatatatcccaaaatgcttgcaagtatatgtacacatgtattcgcaaatgtgagt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0417800, RefSeq:Os09g0417800