Os08g0230500

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Revision as of 12:52, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0230500| Description = Protein of unknown function DUF537 family protein| Version = NM_001067834.1 GI:115475404 GeneID:4344995| Length = 45...")
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Gene Name

Os08g0230500

Description

Protein of unknown function DUF537 family protein

Version

NM_001067834.1 GI:115475404 GeneID:4344995

Length

4531 bp

Definition

Oryza sativa Japonica Group Os08g0230500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:7963020..7967550

Sequence Coding Region

7963505..7965097

Expression

GEO Profiles:Os08g0230500

Genome Context

<gbrowseImage1> name=NC_008401:7963020..7967550 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:7963020..7967550 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcttttgaagataaagcaatggctagccgtgtcgcttcaccctcaccaaaatctatggcttcagaatcagacccaagcatgatgttagctatcacttcgaatatggagcattctcaagcaaataaccagtcagtttcagttcttggtccagtggctatcttttgggatattgagaactgccctgttccaagtgatgtacgaccagaagatgttgctggaaatgtccggatggcattacggctacatcctgttgttaagggtgctgtgacaatgctctctgcatacggtgatttcaatgccttcccaagaagactcagagagggatgtcaaagaactggagtcaaacttgttgatgttccaaatggaaggaaagatgctgctgataaggctatactggttgatatgtttctatttgcattggacaatcgtccaccatcatccattatgcttatatccggtgacgtggactttgctcctgcattgcatatacttggtcagcgtggatacactattgtcctggccattccatcctcagttactgtatcttcagcattgagcagtgctgggagtttcgtctgggactggcctagtcttgctcgtggtgaaggtattgtggcccctagatccatagggcgccgctttgccgatcctccaggatatcaacatggtgggaattttgggtcgttccctgacacgcagaatgaagaggaggccattgtctacatgggaacttcaagaaatgaatgcagtggtagaactaccagcaaccagatatattgctataactcttctcaaaccactagagaaccatccaaagctttctatacagttacagatgggaactgtggcacatcatcaaggtcacataatttagcatgtagtttgaatgaaggtccagatgtagaccaaggtttgccagatgagcggtcatggtgggttcgtcctggtgatcttcaaggtttgaagggccaattgttgcggttgtttgagttatcaggtggatctgttccacttgtccgtgttccttcagaatatctaaaactctttggaagacacctctatgtatcagaatatggagctgttaaacttattcatctctttgaaaagcttgctgactcttttgtggtcatagggaagggtcatagaaaggtgatttgccttcgaaattctggtgatagtaacctgaagaaatattcaaccacaccaattattttgaaaaaggaaaatagaggtggttctattcttgatgaaagcactataggaacaggtcagcagttgggcagctcatcagatgatttctcagaggatgaacggaacattaacccagatgtagatggagcatatgccttcgatagccatctagacaatttcagacaggagattcaggagcttcttgtctgttactcttgccctgttccactgggtaatttcaagtctctctatgaacaacggtacaagaagactcttatctatgagagctttggtgtcgatggtctggaggagctagttgagaaggtaaaagatgttgtggaactgtgtgaggatcagaccagcaaaaggaagtaccttatagccaattatcgcagttaa</cdnaseq>

Protein Sequence

<aaseq>MSFEDKAMASRVASPSPKSMASESDPSMMLAITSNMEHSQANNQ SVSVLGPVAIFWDIENCPVPSDVRPEDVAGNVRMALRLHPVVKGAVTMLSAYGDFNAF PRRLREGCQRTGVKLVDVPNGRKDAADKAILVDMFLFALDNRPPSSIMLISGDVDFAP ALHILGQRGYTIVLAIPSSVTVSSALSSAGSFVWDWPSLARGEGIVAPRSIGRRFADP PGYQHGGNFGSFPDTQNEEEAIVYMGTSRNECSGRTTSNQIYCYNSSQTTREPSKAFY TVTDGNCGTSSRSHNLACSLNEGPDVDQGLPDERSWWVRPGDLQGLKGQLLRLFELSG GSVPLVRVPSEYLKLFGRHLYVSEYGAVKLIHLFEKLADSFVVIGKGHRKVICLRNSG DSNLKKYSTTPIILKKENRGGSILDESTIGTGQQLGSSSDDFSEDERNINPDVDGAYA FDSHLDNFRQEIQELLVCYSCPVPLGNFKSLYEQRYKKTLIYESFGVDGLEELVEKVK DVVELCEDQTSKRKYLIANYRS</aaseq>

Gene Sequence

<dnaseqindica>2454..4046#cacttcgcccaccaacgacaccgccctccgctcgccgccggcgaccaacgccggtgatctctccccccgcccgcccgcccgtccacaccggccggagcatccgatcgaccggcctcccccccgccccagacaccatcgccttcccaccgctgccgctcgtcccgtctcaccgatccctccatccttggtcgaatcaatcggaggtactcttctctcctatatcctcctctgccgccgcgctgctgagccggccgccgccgccgccgcctgtaggatagggggtgttattggattcttttcttcgtatgtggtggtggaagaaaagaaccctagcgttcttgggttgaagcttttgagggaattgttgttcttgttttatttcgctaatacaaatcgctctgagtccaattgatgcgtggtggagcgccagtagcggcttgtttgctagaaatttcttctcgggttcggccttaacctgtctgatccgctcttgtgaccagtacttcggtctgcttgcgttcttggatcgttgattgcgttctcagttagtgttgtcattcctaggaagtttgtttccagatgagattatttgatcgatccgcgtctgccatgagaaacacaagagcgcctagttaattattaatggacttcactcaatttttgggcttaggatttaggaagcggctcatgttggataaaaactgccttgtttgttccactagaaggttaaggcatgtggttgtattcctgatgataatttattgtttgcctgcatgttatctgaagtaatcagttatgtgatcgaaaaaattggttacggcgtatttccttcccgtttttactagtctagtatgtgcattaacattcctagaaagttgtaggatcatgggatattatccttttatggttttaattttgagcttacttctgctatacatgagctagatagaggtcttggggtgttgagcgctcctgggtgtctcacgatgtgctgctgggaagaatgtaagcaccattttttgctgtatcgtggaacttcgttactatgttcacccactgtgttctataatatattgaatgtgggtatcttgcttgatgataataatctttgatatcttaatgtgaagttcttttccttctcacaggctagttctttcttgaagttagtgcacatattagcttattactcattgtcctatttaccttattactgaaaggtcgctttccttttgttaaaaaaatgcaatatttgtcaaatgagtatgtattttaattcttttttaaaaaaattaaccaaagaacaaaataatacacataaatgtacttgatcttcttttccaaaaatatgccattgcaggattgttcctaactttctatgcactttgctttctgctgttcatgacatttctcttatcttatgcaccttgcattgtgtttatttgtcattaactcactagtactggaccattactagtgcatcatgtttatgttgcaccccttttcaatcctttaagctgcctagtcagatggctttagttgttatgaacatgggtggatgatgatgttatggttctttgctgtaaaacttgatagcaataggtcccacatgccagccatgtctaatttcttggaactagtagacctaatttttgtgtactgtgttgtgtcatgcccccagtgagcattgtgcagccatacccaagaagatgtattccatcacatatttccttttctacaagagagaagagcaatccatcttatgtgttatgacaagatgacatctgtgctcagtgggaataagaaaactgagcgcctccaggcatcttttagaaatgcagctgctactatgttactatgttagacacttgcatttaggtgtagccatgaaatcctgttaatatccctgtaactttgtatctttcttagaagcaggaaataatatctgaattatggcatctaaggctttgaatatcctatctgaatttgataggatgaatcatttgcttggactgcttataggaacagctaggggaacaccgtgacaacagctcaaatatgctattggttactctgtccatacccaaattgatgtctttcttggactttgtgctgtaatctaggcatgcataggaaaacaagctatatgctccccttcagttgttacttattcctcttagatattatgctaaattaatttgatcttagatacggataatgaatgagaggcatatacaaattacaaaggagaaacaacacggagttatctcgacattgtaaaatgacttgtattcaggaataaaatttgaaagctagattcacatgtttaaggagcaggaaagtacatactctgtatgtattacatgtgatttgaagacatcatatgtttgcatttcctaaaatctctcaatttggcttttgcttaatctttatcttccttctgctatgtagataacatgtcttttgaagataaagcaatggctagccgtgtcgcttcaccctcaccaaaatctatggcttcagaatcagacccaagcatgatgttagctatcacttcgaatatggagcattctcaagcaaataaccagtcagtttcagttcttggtccagtggctatcttttgggatattgagaactgccctgttccaagtgatgtacgaccagaagatgttgctggaaatgtccggatggcattacggctacatcctgttgttaagggtgctgtgacaatgctctctgcatacggtgatttcaatgccttcccaagaagactcagagagggatgtcaaagaactggagtcaaacttgttgatgttccaaatggaaggaaagatgctgctgataaggctatactggttgatatgtttctatttgcattggacaatcgtccaccatcatccattatgcttatatccggtgacgtggactttgctcctgcattgcatatacttggtcagcgtggatacactattgtcctggccattccatcctcagttactgtatcttcagcattgagcagtgctgggagtttcgtctgggactggcctagtcttgctcgtggtgaaggtattgtggcccctagatccatagggcgccgctttgccgatcctccaggatatcaacatggtgggaattttgggtcgttccctgacacgcagaatgaagaggaggccattgtctacatgggaacttcaagaaatgaatgcagtggtagaactaccagcaaccagatatattgctataactcttctcaaaccactagagaaccatccaaagctttctatacagttacagatgggaactgtggcacatcatcaaggtcacataatttagcatgtagtttgaatgaaggtccagatgtagaccaaggtttgccagatgagcggtcatggtgggttcgtcctggtgatcttcaaggtttgaagggccaattgttgcggttgtttgagttatcaggtggatctgttccacttgtccgtgttccttcagaatatctaaaactctttggaagacacctctatgtatcagaatatggagctgttaaacttattcatctctttgaaaagcttgctgactcttttgtggtcatagggaagggtcatagaaaggtgatttgccttcgaaattctggtgatagtaacctgaagaaatattcaaccacaccaattattttgaaaaaggaaaatagaggtggttctattcttgatgaaagcactataggaacaggtcagcagttgggcagctcatcagatgatttctcagaggatgaacggaacattaacccagatgtagatggagcatatgccttcgatagccatctagacaatttcagacaggagattcaggagcttcttgtctgttactcttgccctgttccactgggtaatttcaagtctctctatgaacaacggtacaagaagactcttatctatgagagctttggtgtcgatggtctggaggagctagttgagaaggtaaaagatgttgtggaactgtgtgaggatcagaccagcaaaaggaagtaccttatagccaattatcgcagttaagccttctgttgtccaaatgtcagtcacttcagttatttagatggacaagtatgctccagaaacactccttccatgccactgtacgccccatccgaattcagtgttctgaaggtgttgagaaggtaaaagatgttgtggaatgacgaaagggatcaagccagcaaaaggtaattcctcatggttcactacatcagtaatttagggcttctgttgtccaaatgtcagtagttcagtaacatcagtattctagatttggtttccttactaagaatgttcaagcactgggccggcgtttgttttttaatcatgtcggttccgtaagtgtgggagcacagaaaatgcttgtaataatttatcattatgctaatctacacagatagatggttgttgatctttgcagaaagatagctgtgaaagaaaccaatgttaaccatttgccagttacctggtagttgcatagagcaaaatctgaactctgatgtagc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0230500, RefSeq:Os08g0230500