Os08g0232800

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Revision as of 12:52, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0232800| Description = Conserved hypothetical protein| Version = NM_001188521.1 GI:297726172 GeneID:9271236| Length = 3064 bp| Definition ...")
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Gene Name

Os08g0232800

Description

Conserved hypothetical protein

Version

NM_001188521.1 GI:297726172 GeneID:9271236

Length

3064 bp

Definition

Oryza sativa Japonica Group Os08g0232800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:8065924..8068987

Sequence Coding Region

8065924..8066047,8066137..8066221,8066645..8066918,8067865..8068566,8068588..8068750
,8068887..8068987

Expression

GEO Profiles:Os08g0232800

Genome Context

<gbrowseImage1> name=NC_008401:8065924..8068987 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:8065924..8068987 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgccaaggaagaagtgtgctgggaagaaatcgtccctgcggctgacgagcagtgaggttccattgaaggcattggacatgtcttgggttcctcaagggatggacgctagcgcagcttgcagagttgatgttcgagttggtccatacgttgagtttgatgagaacggtagaccggattatcatgtctctcgtgatattaagtgggtaatagacaaggatacaatttgttggattgaccttattaatgatcttgatggggaggagataactgtaacctattgggacaaaaatgttgagaggtatgcagagatagcttcggatagttcattgcttgatgcatttgatatgtactgggagatgaggaggctccctttgcttgttaatgtgagtgatgacccacgaaataggaccgagccttgtatggatcaaggcagcattgatgggccggctagtactgttgcaggagatggacaagttgcttgtactgacattgtattagccactcaagagagccaagtcattgcatctaaacgtagcaaacctagcaaacctacgaagcctaaggaaaaggttgatgattggggtgagagtgatgaggttgagtatgttggtgtagatgatgagaaagagaaatacaacgacttggtttcagatgatgaggcagttgacgcagactatgaccctggttctgacgaagatcaagacgatttagccgttgacgatgaggagggttgtgagtcagtggctcatgtaactgatgtagacaatcctaagatagccgttggtgtaacttttgaagatggcaattgctttaaaaggtgcattagacaatatgcagtactaaaagaggttgaacttgcagtgccatatagcgaatcaaggaggtatagggcatactgtaaggctaagcggtgcaagtggaggatacatgcttctagactaccggatgggagaacttggcaattctctactctcagtaaatgtgactatgtcacaaacaatatagcagagaccttcaatagttggatcaggcatgagaaatcactgcctgtagttgatttgatggataagattaggcaaatgatcatggagagaatgtctgttaggaaaaggcttgctgtcaagttgactggtactattcttcctagtgtaatgaagtccctgtatgctaggagcagggaccttggatacaagctgtactcagcccacagtcacctaggagaaataggagggactgccccaccaaagcccaagagaaaaagagtgaagaaagttgtgctttctgtgcaagatcctgttatacaagtcccaacagctactgtgtccacaccttcaagatcacaagcatctggggtaactcaaacaagcccaataacaaggagcagggctagagctcacaatttggatgttgatgctccaagcaacaaggcagctggtgccatctga</cdnaseq>

Protein Sequence

<aaseq>MSPRKKCAGKKSSLRLTSSEVPLKALDMSWVPQGMDASAACRVD VRVGPYVEFDENGRPDYHVSRDIKWVIDKDTICWIDLINDLDGEEITVTYWDKNVERY AEIASDSSLLDAFDMYWEMRRLPLLVNVSDDPRNRTEPCMDQGSIDGPASTVAGDGQV ACTDIVLATQESQVIASKRSKPSKPTKPKEKVDDWGESDEVEYVGVDDEKEKYNDLVS DDEAVDADYDPGSDEDQDDLAVDDEEGCESVAHVTDVDNPKIAVGVTFEDGNCFKRCI RQYAVLKEVELAVPYSESRRYRAYCKAKRCKWRIHASRLPDGRTWQFSTLSKCDYVTN NIAETFNSWIRHEKSLPVVDLMDKIRQMIMERMSVRKRLAVKLTGTILPSVMKSLYAR SRDLGYKLYSAHSHLGEIGGTAPPKPKRKRVKKVVLSVQDPVIQVPTATVSTPSRSQA SGVTQTSPITRSRARAHNLDVDAPSNKAAGAI</aaseq>

Gene Sequence

<dnaseqindica>2941..3064#2767..2851#2070..2343#422..1123#238..400#1..101#atgtcgccaaggaagaagtgtgctgggaagaaatcgtccctgcggctgacgagcagtgaggttccattgaaggcattggacatgtcttgggttcctcaagggtaagcttgattcctttttgcctcgcattatgagtggaattgtttgcagtgatatgtgttgcgagttgtagagtttttgttgcaatttaaagtgattgaaatttggtgattttattgctgcgtttttgtcgcgtaggatggacgctagcgcagcttgcagagttgatgttcgagttggtccatacgttgagtttgatgagaacggtagaccggattatcatgtctctcgtgatattaagtgggtaatagacaaggatacaatttgttggattgaccttattaatgatcttgatggggaggtaaaacatagttatcttcaggagataactgtaacctattgggacaaaaatgttgagaggtatgcagagatagcttcggatagttcattgcttgatgcatttgatatgtactgggagatgaggaggctccctttgcttgttaatgtgagtgatgacccacgaaataggaccgagccttgtatggatcaaggcagcattgatgggccggctagtactgttgcaggagatggacaagttgcttgtactgacattgtattagccactcaagagagccaagtcattgcatctaaacgtagcaaacctagcaaacctacgaagcctaaggaaaaggttgatgattggggtgagagtgatgaggttgagtatgttggtgtagatgatgagaaagagaaatacaacgacttggtttcagatgatgaggcagttgacgcagactatgaccctggttctgacgaagatcaagacgatttagccgttgacgatgaggagggttgtgagtcagtggctcatgtaactgatgtagacaatcctaagatagccgttggtgtaacttttgaagatggcaattgctttaaaaggtgcattagacaatatgcagtactaaaagaggttgaacttgcagtgccatatagcgaatcaaggaggtatagggcatactgtaaggctaagcggtgcaagtggaggatacatgcttctagactaccggatgggagaacttggcaagtaagtaggcctacataattgatgttcactgatttgtctattcattgtgttttctgccatttataacatttttgctatttcatttcagataaagaagcttccttacgcacataattgtgctagcacagctggtttggagaacaattgcatggccaccaattcatgggtgagagatcgtgtgatcaacaagttgagacaagaaccaacccttggtgctactgctttaaagaagttcttggaagagaagtacaagatcaatatttcttactacgttgtttgggacggtaggcagatggcacttgatgaaatccttggcaaatgggaagatagcttcgatgcagcttacaacttcaaagcagagttggagaggacaagtcccggatcaattgtggaggttgatcatgtgacagtggatgggaagaatcatttcagcaagatgtttgtagcactgaaaccatgtgttgatgggtttcttaacggttgcaggccatatttaggtattgactcaactgtactgactggcaaatggagagggcaattggcatcagcaattgggattgatggccataactggatgtttcctgtagcatatggagtctttgagtcagaaagtacagataattgggcttggttcatggataagcttcactcggcaattgggtccccagaggggttggttctgtccacagatgctggtaaaggcattgacacagcagtcaccagagtcttcaccaatggagtagagcatagggaatgcatgagacatttggtgaagaactttcagaagaggttcagtggtgaggtctttgagaggaatctgtggcctgcatcaagggcctataggcaggacatattcgagagtcactataatgagatgaaagaggcatgtccaaaagctacagaatggattgataacttccataagcacatttggactagatgtcagttctctactctcagtaaatgtgactatgtcacaaacaatatagcagagaccttcaatagttggatcaggcatgagaaatcactgcctgtagttgatttgatggataagattaggcaaatgatcatggagagaatgtctgttaggaaaaggcttgctgtcaagttgactggtactattcttcctagtgtaatgaagtccctgtatgctaggagcagggaccttggatacaagctgtactcagcccacagtcacctaggagaaataggagggactggtagggatttgaagacatggaggcacactgttgacttgaacactcgagaatgcagttgtaggcaatggcaggtaacaggtataccttgcacacatgccatttttctagtcatttcacggagggggctagaattggaacagtttgtggatgactgctactctgttgcaacattcaagaaggcatatgcaggacatgtagttccaatgacagacaagtctcaatgggccaagattaatgtaggattcaagttatatccacctctgttgaagaggtcagcaggcagacctagaagcagaaggattaaaggaatggaagaaggaggttcaggaaaaagaaagtatagatgcaagaggtgtggtcagtttggccatatcaagaagacttgcaatgaaccagttgctgatccatctgcccctccaccagccccaccaaagcccaagagaaaaagagtgaagaaagttgtgctttctgtgcaagatcctgttatacaagtcccaacagctactgtgtatgttgtcaacagcaaaatttcttttttatgccatacatttgctatatttactctacatatttatgttgattttcatttttttgcaggtccacaccttcaagatcacaagcatctggggtaactcaaacaagcccaataacaaggagcagggctagagctcacaatttggatgttgatgctccaagcaacaaggcagctggtgccatctga</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0232800, RefSeq:Os08g0232800