Os08g0235600

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Revision as of 12:52, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0235600| Description = Disease resistance protein family protein| Version = NM_001067849.2 GI:297608208 GeneID:4345014| Length = 6629 bp| ...")
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Gene Name

Os08g0235600

Description

Disease resistance protein family protein

Version

NM_001067849.2 GI:297608208 GeneID:4345014

Length

6629 bp

Definition

Oryza sativa Japonica Group Os08g0235600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:8229115..8235743

Sequence Coding Region

8229115..8229218,8233096..8234092,8234126..8234175,8234243..8235743

Expression

GEO Profiles:Os08g0235600

Genome Context

<gbrowseImage1> name=NC_008401:8229115..8235743 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:8229115..8235743 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggagatcgccgtgagtttggttgggagtttgatcgccggcatctcgacgctggtggagaaggaggccaccttgctgcagagcgtgccggagaataccaggttcgtcaaggatgagcttcaaacaattggagcatttcttggtgttgttgaaaacatgaaggaggattccccgaagtatcagatggctagagtttgggcggagcaagtgaaggatttggcttatgatatggaagattgcctagaggaacaaatcactgccctcactactagaaattcaagttggtctcaatatgtaaccaattacagagctctccgtccttttgctgccaagttaagtgatctcaaatcaaggatagttgaggtgagcgagagaaatatgcgttatcatcttgtcattgctgaccaagtcatcgacaatcatatgaattttatggtggctttgaacaaagtgttgtctcgctctgtggaaggcactactgacaattggacgcaaaatgtggttacatgggctgaagctcctgaagaatctgcatcaaacgacaaaacctgtgctcccaaagtgactgcagtagttggcatgtttggctcaggctctactcgtgtttctgagatatacaagaggcataaagctgataaaaaatatgattcctatgtgtggatcgaattgtcgcaagatgtgaatgtcacaaaggtattcaaggatatgatgaagcaactctttgatgattcttcaagtcagcctgaatatactggagaagatgagctagcccatggtattcaacacgaactcaaacaaaaacggttcttggtcgtgtttgatgagttgtggacgacacatgcatggcatagcataaaaaaggcactccctcatgttagtagaagtggcagccaggtcattgtaacaacagagatcgttcatgttgcaaaaggctgcaccgaatcagatgatcatgtttattgggtccaactgttatcaaaacaagaatcatttgagcgttttaagaatttgattcttgtaacagaaaactcaaaaatgactcatgaagatagagaggacttcgaagacctggacctaaaggaactagacagactcaagatactaagaaaatgtcgtggactagaattggctataggaactgtagccaataaccacccaatgctcaaagatatatggaaagtaatgattcagaggtacaaagatctaccgccttatctcaagccatgcttcttatacctgagcattttcccagagaactctgacatcaatgtggagactataatagaccgatggttagctgaagggcttgtgagggatagaactggaatgagccctaggactgttgcaaaatggtatttgttgtggctcattgatcgaagcatgattatggtatccaacctgagaaagaacagatcatttaagacatgctggatccatcccatgatgcgagatatcctggtcatgatttcacaagaggagaaattttcaatcactgttggtccaagaaagagttcaagtttgttagtaaagcgtttgccccatgtaacacttgatggtgggagtggcaggaagttagctagatatgtggatctttctggcatcaggtcactaacagtgttcaacgaaccatcagaatccattgctgcacttatttgctcctctaaacttagagcagtacgcattttagatttgtcaaatgccaatgagtttaaaatcactagaagagatatagagcgcgtaggagaactgtgtcacttgaggtacctaaatctttacaaaacaaatatttgtgagcttccttcgtcaataggcatgctcccgttcctgcaactgctaaacgtgagaaagacaaggatcacaaaacttcctaatgaggtcactcaactcggcaagctacaactccttcgtgctagcagaagaacagaagattcctgtcacaatagaaggaaccgatgctgcattgattcagctctaacagtgcctaaagggatagagaacctgcaggacatagaaaggctggatatcatggatatcaaggacaacagtggctcagaaattgaagctttggggaaacttgctaggttggagcaccttggattggcaggcattacaattggcaacagcaaacaagtctccaaaaccctaaaaaggatttcttcttcgctgacctatttgtacctcggagcatgccaaagtgatggaacacttgcttgcctgcccatctctgaaaagaaaaggaagaagccactggagtttccacgcctccaaaccataaagcttgacggtcatattggaaaaatgccatactggatttctaactcatggacacttgcggttattaaactttacaggactaatctccaacagaatcatataatgtcccttgagaaactaccctgcttggtcacacttgctctcctagacaattcatatattagcgagacattggttttctatgataaggccttcagagagctcaagaccctggagattattaggctaaccaagttgaaaacagttatatttacagaagaagcagtgccccagcttcgaagtttagccatcagatgttgcgaattgagattaaaaggaaaaaacaaccttaaactccggaaggttgatcttgatgatggtgtcgaagaggtataa</cdnaseq>

Protein Sequence

<aaseq>MAEIAVSLVGSLIAGISTLVEKEATLLQSVPENTRFVKDELQTI GAFLGVVENMKEDSPKYQMARVWAEQVKDLAYDMEDCLEEQITALTTRNSSWSQYVTN YRALRPFAAKLSDLKSRIVEVSERNMRYHLVIADQVIDNHMNFMVALNKVLSRSVEGT TDNWTQNVVTWAEAPEESASNDKTCAPKVTAVVGMFGSGSTRVSEIYKRHKADKKYDS YVWIELSQDVNVTKVFKDMMKQLFDDSSSQPEYTGEDELAHGIQHELKQKRFLVVFDE LWTTHAWHSIKKALPHVSRSGSQVIVTTEIVHVAKGCTESDDHVYWVQLLSKQESFER FKNLILVTENSKMTHEDREDFEDLDLKELDRLKILRKCRGLELAIGTVANNHPMLKDI WKVMIQRYKDLPPYLKPCFLYLSIFPENSDINVETIIDRWLAEGLVRDRTGMSPRTVA KWYLLWLIDRSMIMVSNLRKNRSFKTCWIHPMMRDILVMISQEEKFSITVGPRKSSSL LVKRLPHVTLDGGSGRKLARYVDLSGIRSLTVFNEPSESIAALICSSKLRAVRILDLS NANEFKITRRDIERVGELCHLRYLNLYKTNICELPSSIGMLPFLQLLNVRKTRITKLP NEVTQLGKLQLLRASRRTEDSCHNRRNRCCIDSALTVPKGIENLQDIERLDIMDIKDN SGSEIEALGKLARLEHLGLAGITIGNSKQVSKTLKRISSSLTYLYLGACQSDGTLACL PISEKKRKKPLEFPRLQTIKLDGHIGKMPYWISNSWTLAVIKLYRTNLQQNHIMSLEK LPCLVTLALLDNSYISETLVFYDKAFRELKTLEIIRLTKLKTVIFTEEAVPQLRSLAI RCCELRLKGKNNLKLRKVDLDDGVEEV</aaseq>

Gene Sequence

<dnaseqindica>1..104#3982..4978#5012..5061#5129..6629#atggcggagatcgccgtgagtttggttgggagtttgatcgccggcatctcgacgctggtggagaaggaggccaccttgctgcagagcgtgccggagaataccaggtaatcaattaggatgagccggcgccgcacatagagtttttctgtctcctccactcgcttttcttcatgaacatgagcatcggttcttgcaatgtgccaacagaactgacaaatggagaagacaaaaacacatcagaccattatctaagaaaaaacacacattagatcatgagagcaattagctcttttatgacaatttcactgttagagcatgtgacagtcattttcttttttgctttgttctaatatccctaaattagtcacttttaaaaaataattattgagtaatcattatggacaaaaggttaaaattggacaatatttaaggcagtatgatgcagaaataggtaaaagtttattagcttatggctttatgaaaatagcgcatttggagtacagaacaaaatgcatttgtaaaatatagagtcaatatatgtaaggtggtgttggtcacaaactcctactttggataatcttcaaaagttccctgaatgtccacagttattacagagaaaaccaaataacagtagacagttcccagaaagcaaacaacaaacaaatctaaatatttatgtgtattatggtatatcacgaactaataggagtttggtgaagcgatctaagttttaaaaagatattagatcctaaaaagaaaaaaaaagggaaaacactgtgcatgatcttaaatcaattttgcactacctccggtcaggaatatttaacacctgcgctgctgcgattagtgacactggcatcaaatattcttgactggatggagtacttatctttctgaagaaatcctaatgtttctatgttcagaggcagacaggtaggtccctaaactatacaaataaatatttagacctataatgttttagtgtgaacaataactacatatataagtatacaagataatatatagggctaaaagatgttatattatacacaactaaataataataggcattagatttgattgtgtgactaattagtatcggtatcataataacaagttggctcgagtttttaacgagctgaactgagctctactttcagttcagttatctaaacggccaagcctagcaagcttattctcctatcaagttttaacaagctgagccgagtaaagccaacttgttaattgttatccacccctagtagttgtgtccccatgccaatgactcaagatataaacaatgactgaatagaaactagggatggtttagcagttattttccaccattaggagtaaatggcatgagctgacaattagggcctgctggtcagcgatacagagaaaattaatatagaatcgcgaatcaacttgattcagcttgctggtggggaggatttgttggggctcaggatgactagagggaagggaagctgttcagtgttcacctgtcacgcggaccaatgctcactgaaacaattgaatcaataaaattaggaaagttatgtggaaacgaacttggaataagaacaattgtttcgataaaactagcagggtggcccgcgcaattgcgcggctagcacccaaacaaaatcatttttttttaagtatgattttacttaaaaatttattaaatagctatctcattgtcttaagagtttgaaagaccaaaccttataatccccgtgtttctaattatattgttttttaaaagtcacatcagttgctaccccttatgtcatctccttctttatttgcttgctcgatctaccactatttctattcattctccttggaacctttaaaaattggatcttatagtttttagagtttattgtcacgttgggtttcgtttttataatttctagacctcccgtcaaatgttgccattttactcctctatggcacatcctctgtctcttctctttattgtcattgagattttaaaaatcgaacataattatcgtttggattcatttttactttctagaagtcccgccaaaccgtaagcggctttgccattgtagttctctacggctcgcccgctgcctcccttctttattgtcattgagattttaaaatcgaacattattatcattgttttttttttacttttagaagttccgaacctttaaaaattgaaccatgtagtttttagagtttattgtcttgttgggttttattttttataatttttagaagtctcgtcaaacgatgccactgtgctcctctacggcccgtccaccgcctactctttattgtcattgtgattctaaaaattgaacataactatcgttggaattcattttttattttctagaagtcccgtcaactgtcggcagctctgcaactatactcctatacaccccgcccgctgcttctcttttttattttcattgagattttaaaattcaaatatgattatcaatagttttttttttactttctataagtcccgacaatcgccttgctcgtttgcttcacagcatgcttgtcgtccctccttttaatcgtcattaggattctatttggtgttttgttaacagtttttatatgtcgtatcaaccgccagcactctactcctttatagccatgatacttaatttatgtcgtcgtgtgttctagatggtcttttctttcaatagtctttatttttatcacaaattttagttatttataaattgtattcctaattgaaatcttttttctttttctaatttccgaatttatttttttcgtattgtgttcttttgatatttttattttttattttcatttttagttgtttcaaaattgtattcctactttaactctcttttttatttgcctaattttggattttattttatttttattccgaatttaattaatctaccaattttaattaatctcgtattgggttcttatatggactcttcttttaatattccttatttttaattccgaatttcagctattttaaaattgtagccctacttgaactatccttttgttttcaaattttggattttattttatttttatttcaaattttgattgatctcgtattgggttcttatatggaaacttctttcaatattgcttatttttaattccgaatttcagctatttttaaattatatttctacttttttttctccttttatttttttctaattttgaattttattttatttttatttcgaattttgattaatctcgtattgggttcttatatggaaacttgttcaatattgcttctttttaattccgaatttcagctatttttagattgtatttctacttggactctccttccttttttgacaaaaacttttggtaggctacagaattatttccagtgatctatcgtgtaggtgttgatagcaagatggatgaatgcacgtgattttagagtggcagcaagattatctgggcaagtgaacttttggtagctacaaaatactcttccgtggactgtgcatcttttttgttttcctttccttctgtggattgtgtttttttttcctttttgtccacacccaatcggacatacccttgcctagatactattaggactctgacatgcatgatgcatgctcgttagaatttttgtttcgtacttatacctttcctatttatgtattatataaatagagtttgtttcgtaccaatagaaatattgcccaacaaatctacaccctttaatctatatgcactatataatctaaaggtgtagcttttttctctttttctccgattaatgtgggaatttctagcctcaacagcgaacgtgatgcctcctttcaagactgttttaataatataatagatagattcctggtaaattacggaaactatatgttgtctaaaatttttatttttgtttgttctacaaaaaaaagtgaatacactgaggaacatttagttgtttccaacaagcaggttcgtcaaggatgagcttcaaacaattggagcatttcttggtgttgttgaaaacatgaaggaggattccccgaagtatcagatggctagagtttgggcggagcaagtgaaggatttggcttatgatatggaagattgcctagaggaacaaatcactgccctcactactagaaattcaagttggtctcaatatgtaaccaattacagagctctccgtccttttgctgccaagttaagtgatctcaaatcaaggatagttgaggtgagcgagagaaatatgcgttatcatcttgtcattgctgaccaagtcatcgacaatcatatgaattttatggtggctttgaacaaagtgttgtctcgctctgtggaaggcactactgacaattggacgcaaaatgtggttacatgggctgaagctcctgaagaatctgcatcaaacgacaaaacctgtgctcccaaagtgactgcagtagttggcatgtttggctcaggctctactcgtgtttctgagatatacaagaggcataaagctgataaaaaatatgattcctatgtgtggatcgaattgtcgcaagatgtgaatgtcacaaaggtattcaaggatatgatgaagcaactctttgatgattcttcaagtcagcctgaatatactggagaagatgagctagcccatggtattcaacacgaactcaaacaaaaacggttcttggtcgtgtttgatgagttgtggacgacacatgcatggcatagcataaaaaaggcactccctcatgttagtagaagtggcagccaggtcattgtaacaacagagatcgttcatgttgcaaaaggctgcaccgaatcagatgatcatgtttattgggtccaactgttatcaaaacaagaatcatttgagcgttttaagaatttgattcttgtaacagaaaactcaaaaatgactcatgaagatagagaggacttcgaagacctggacctaaaggaactagacagactcaaggtacttgaaccgcccttcaatacaattgaacagatactaagaaaatgtcgtggactagaattggctataggaactgtagccaagttacttgcctcagtctcctcacaagtggggaaaactatgtgatgatcttccttcattactctacagtaaccacccaatgctcaaagatatatggaaagtaatgattcagaggtacaaagatctaccgccttatctcaagccatgcttcttatacctgagcattttcccagagaactctgacatcaatgtggagactataatagaccgatggttagctgaagggcttgtgagggatagaactggaatgagccctaggactgttgcaaaatggtatttgttgtggctcattgatcgaagcatgattatggtatccaacctgagaaagaacagatcatttaagacatgctggatccatcccatgatgcgagatatcctggtcatgatttcacaagaggagaaattttcaatcactgttggtccaagaaagagttcaagtttgttagtaaagcgtttgccccatgtaacacttgatggtgggagtggcaggaagttagctagatatgtggatctttctggcatcaggtcactaacagtgttcaacgaaccatcagaatccattgctgcacttatttgctcctctaaacttagagcagtacgcattttagatttgtcaaatgccaatgagtttaaaatcactagaagagatatagagcgcgtaggagaactgtgtcacttgaggtacctaaatctttacaaaacaaatatttgtgagcttccttcgtcaataggcatgctcccgttcctgcaactgctaaacgtgagaaagacaaggatcacaaaacttcctaatgaggtcactcaactcggcaagctacaactccttcgtgctagcagaagaacagaagattcctgtcacaatagaaggaaccgatgctgcattgattcagctctaacagtgcctaaagggatagagaacctgcaggacatagaaaggctggatatcatggatatcaaggacaacagtggctcagaaattgaagctttggggaaacttgctaggttggagcaccttggattggcaggcattacaattggcaacagcaaacaagtctccaaaaccctaaaaaggatttcttcttcgctgacctatttgtacctcggagcatgccaaagtgatggaacacttgcttgcctgcccatctctgaaaagaaaaggaagaagccactggagtttccacgcctccaaaccataaagcttgacggtcatattggaaaaatgccatactggatttctaactcatggacacttgcggttattaaactttacaggactaatctccaacagaatcatataatgtcccttgagaaactaccctgcttggtcacacttgctctcctagacaattcatatattagcgagacattggttttctatgataaggccttcagagagctcaagaccctggagattattaggctaaccaagttgaaaacagttatatttacagaagaagcagtgccccagcttcgaagtttagccatcagatgttgcgaattgagattaaaaggaaaaaacaaccttaaactccggaaggttgatcttgatgatggtgtcgaagaggtataa</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0235600, RefSeq:Os08g0235600