Os09g0419500

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Revision as of 07:25, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0419500| Description = Zinc finger, RING-type domain containing protein| Version = NM_001069726.1 GI:115479194 GeneID:4347076| Length = 221...")
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Gene Name

Os09g0419500

Description

Zinc finger, RING-type domain containing protein

Version

NM_001069726.1 GI:115479194 GeneID:4347076

Length

2215 bp

Definition

Oryza sativa Japonica Group Os09g0419500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:15744385..15746599

Sequence Coding Region

15744611..15744701,15745196..15745412,15745656..15746216,15746330..15746414

Expression

GEO Profiles:Os09g0419500

Genome Context

<gbrowseImage1> name=NC_008402:15744385..15746599 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:15744385..15746599 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggatcgcccatgtcgcggccggcgactgcggatgggagcgcgcgcggaggagggctagccttggctatcgcggacgagctccctcaagaggccgttgccaagcctgccttgatgagtcaggtcatggccgggaacagctctatggtggcaaagatggatgaggtttccagggtagctgatgatctgatgttcgctgaagatctgcagctggaagaggtcatccggttctcagctcactcagctggaccgaactgcgcggtgtgcgggcaggcgaccccgtcggtggatgcctcatggaagcctgactactgcaccatctgcatggagacggtggacgccatagagcggttcgccatccccgggtgcacgcacgccttctgcgccagctgcgtgcgccagtacatcgccgccaaggtggaggagaacgtgctgtccatcggctgccccgacccggggtgtaaggacagcggcggcggcgcgctgcacccggaggcgtgccgtgacgtgatcccgccgcagctgtttcagaggtggggcgacgcgctctgcgactcggcgctgtcgtcgctcaagttctactgccccttcagcgactgctcggcgctgctggtggacgacccaggcgacggcgaggaggcgatcacggacgccgagtgcccgcactgcagccggatgttctgcgcccagtgcaaggtgccgtggcacggcggtgccacctgcgccgagttccagaagctcggcaaggacgagcgcggccgggacgacctgctgctgaggaaggtggcgaaggacagcaagtggcagaggtgccccaagtgcaagatgtacgtggagagagtcgaaggctgcgtgttcatcatctgcaggtgtggccactgcttctgctacctctgtgcatcgccaatgtcgagggacaaccaccattgcaagaagtgcaagcgaacgtggtga</cdnaseq>

Protein Sequence

<aaseq>MGSPMSRPATADGSARGGGLALAIADELPQEAVAKPALMSQVMA GNSSMVAKMDEVSRVADDLMFAEDLQLEEVIRFSAHSAGPNCAVCGQATPSVDASWKP DYCTICMETVDAIERFAIPGCTHAFCASCVRQYIAAKVEENVLSIGCPDPGCKDSGGG ALHPEACRDVIPPQLFQRWGDALCDSALSSLKFYCPFSDCSALLVDDPGDGEEAITDA ECPHCSRMFCAQCKVPWHGGATCAEFQKLGKDERGRDDLLLRKVAKDSKWQRCPKCKM YVERVEGCVFIICRCGHCFCYLCASPMSRDNHHCKKCKRTW</aaseq>

Gene Sequence

<dnaseqindica>227..317#812..1028#1272..1832#1946..2030#gacgcgtagcgtaacccaaaaatctaccaaaagccaccaccggcgcatcaactccgacgaaaccggcagcaggtatcccgatggcctactaagccccacgacgcttcggcgaccgggacgacgacgccgacgacgacgcctcgttctcctcctcctcctcctctccgtctccccctccgactacttcttccccccacgaggctctcccagcttgcgcgcgcgcacgatgggatcgcccatgtcgcggccggcgactgcggatgggagcgcgcgcggaggagggctagccttggctatcgcggacgagctccctcaaggtacgtgtgccgctgcttcgctcgatccccggcacgaacgaactactgttcagagttcaaaccctaggtacccagttgatcagtgttgtagtactgatgattgttttaatctctaaattcgcatcccttaaacagctctccctcccagcgaaacatcctcgttgcaatgcgaccaatgtgggtagaacggtaggtgctagggactgtacgaaacgtgcgacgttgatctcggcgcctgcaccgctgtacgcaccatgttcgatgaaatgcttgcaaggagttgtgttagctatcagtgccagttgattccgtagtggagtagcagcgacaagaacttggttccgccttgttttcttgtaattttgacgcttattcaatattcatatggattagacagagatcatgggtaacgattaacgatggctgatttggtcttgtaaacatgatttgaagtgagacatggcttactctcctcttgtgtttctttgcatcagaggccgttgccaagcctgccttgatgagtcaggtcatggccgggaacagctctatggtggcaaagatggatgaggtttccagggtagctgatgatctgatgttcgctgaagatctgcagctggaagaggtcatccggttctcagctcactcagctggaccgaactgcgcggtgtgcgggcaggcgaccccgtcggtggatgcctcatggaagcctgacaactgcgaccatgtcatgtgcatcacctgctttggccaactcgcctctgattctcacgccgacgagctgcccaagtgcccactggcatcttgccaatcctcgccggacatcatcagtgtctcgaatgaagagacgggtggcggcaaagggaaggagctggcgacatatgtcgtgcttgaggagcacggcgaatgctcccgtggcgcggcagccacggctagcagcagtgccagcagtgagttctactgcaccatctgcatggagacggtggacgccatagagcggttcgccatccccgggtgcacgcacgccttctgcgccagctgcgtgcgccagtacatcgccgccaaggtggaggagaacgtgctgtccatcggctgccccgacccggggtgtaaggacagcggcggcggcgcgctgcacccggaggcgtgccgtgacgtgatcccgccgcagctgtttcagaggtggggcgacgcgctctgcgactcggcgctgtcgtcgctcaagttctactgccccttcagcgactgctcggcgctgctggtggacgacccaggcgacggcgaggaggcgatcacggacgccgagtgcccgcactgcagccggatgttctgcgcccagtgcaaggtgccgtggcacggcggtgccacctgcgccgagttccagaagctcggcaaggacgagcgcggccgggacgacctgctgctgaggaaggtggcgaaggacagcaagtggcagaggtgccccaagtgcaagatgtacgtggagagagtcgaaggctgcgtgttcatcatctgcaggtacatacagctacctttctgcctactgcaattcttgctaatcagctgaactgttcgatcgatcgatcactgagcgcaacagcgcaaaatgacttttgccaactgatctgcaggtgtggccactgcttctgctacctctgtgcatcgccaatgtcgagggacaaccaccattgcaagaagtgcaagcgaacgtggtgaatgatctgaagctgcagaactctgattgagtcgaagaagttacttaagtttcgtactgttaaaaatggtcaattactatcattaacctagtttctacttattagcccgtgccgtacttagcattaattagctcgtatattaccactctgatgtcatttgtcaatcaatatcagtagtattactcc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0419500, RefSeq:Os09g0419500