Os08g0241800

From RiceWiki
Revision as of 12:52, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0241800| Description = Similar to Plasma membrane H+-ATPase (EC 3.6.1.3)| Version = NM_001067873.1 GI:115475482 GeneID:4345039| Length = 19...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os08g0241800

Description

Similar to Plasma membrane H+-ATPase (EC 3.6.1.3)

Version

NM_001067873.1 GI:115475482 GeneID:4345039

Length

1954 bp

Definition

Oryza sativa Japonica Group Os08g0241800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:8612750..8614703

Sequence Coding Region

8613137..8613430,8613521..8613703,8613842..8614012,8614112..8614272,8614359..8614440
,8614544..8614585

Expression

GEO Profiles:Os08g0241800

Genome Context

<gbrowseImage1> name=NC_008401:8612750..8614703 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:8612750..8614703 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tctctccagatttacgcggtgtcgattactatccgtattgtgcttggattcatgctgattgctctcatctggaagttcgatttctcaccgttcatgatcctcgtcatcgcgatcctcaacgacggaacgatcatgacaatatccaaggacagggtgaagccgtcgccgcacccggacagctggaagttgccggagatcttcatcaccggcatcgtctacggcacctacctcgccgtcatgaccgtcctcttcttctgggccatgaggagcaccgatttcttcaccagcacgttccatgtgaagccactgatggagaaggacgagatgatgtcggcactgtacctgcaggtgagcatcatcagccaggcgctcatcttcgtgacgcgctcccgcagctggtgcttcgtcgagcgccccggcatgctgctctgcggcgccttcgtcgccgcgcagatcatcgcgacgctggtgacggtgtacgccaccttggggttcgcccacatcaagggcatcggctgggggtgggccggcgtcatctggctctacagcatcgtcaccttcctccccctcgacatcttcaagttcgccgtccgctacgccctcagcggccgcgcctgggacaccctcatcgagcacaagattgccttcacgagcaagaaggattacgggagaggggagagggaggcgcagtgggcgacggcgcagaggacgctgcacgggctgcagacgccggagatgggggaccacctcggcggcgtcggcggcggcgagcggagcagctacagggagctctcggagatcgccgagcaggccaagcgccgcgccgaggtggcccggctgcgcgagctcagcacgctcaagggccagatggagtccaccgtcaggctcaagggcctcgacatggacaacgtccagcaccactacaccgtctga</cdnaseq>

Protein Sequence

<aaseq>SLQIYAVSITIRIVLGFMLIALIWKFDFSPFMILVIAILNDGTI MTISKDRVKPSPHPDSWKLPEIFITGIVYGTYLAVMTVLFFWAMRSTDFFTSTFHVKP LMEKDEMMSALYLQVSIISQALIFVTRSRSWCFVERPGMLLCGAFVAAQIIATLVTVY ATLGFAHIKGIGWGWAGVIWLYSIVTFLPLDIFKFAVRYALSGRAWDTLIEHKIAFTS KKDYGRGEREAQWATAQRTLHGLQTPEMGDHLGGVGGGERSSYRELSEIAEQAKRRAE VARLRELSTLKGQMESTVRLKGLDMDNVQHHYTV</aaseq>

Gene Sequence

<dnaseqindica>1274..1567#1001..1183#692..862#432..592#264..345#119..160#acagcatttgtcttggctgcattcagaatgaatttgagagcatgaatttctcgatcagaatcatcagagattgattttttttttttactgatgatcattgtttccatgttgtttatgatctctccagatttacgcggtgtcgattactatccgtattgtggtaagtaaactgttcttgctgctattccttcaaggatctcatcaacctgaccaacaatgccatgaaattcgtctgaaaattttcccctgttgtcaatctgaagcttggattcatgctgattgctctcatctggaagttcgatttctcaccgttcatgatcctcgtcatcgcgatcctcaacgacggtgagttcttgaacacaacaaaaattgaacttctgatccacacacacacacacaattttagctgatgtacctgattgatgatgcaggaacgatcatgacaatatccaaggacagggtgaagccgtcgccgcacccggacagctggaagttgccggagatcttcatcaccggcatcgtctacggcacctacctcgccgtcatgaccgtcctcttcttctgggccatgaggagcaccgatttcttcaccgtaagcaaacaatcaaacaaacagatccaaagaatcctcaaaaaccttttgattccactgctctgatcgaattcaaattgaatttggttgtgtgcgcagagcacgttccatgtgaagccactgatggagaaggacgagatgatgtcggcactgtacctgcaggtgagcatcatcagccaggcgctcatcttcgtgacgcgctcccgcagctggtgcttcgtcgagcgccccggcatgctgctctgcggcgccttcgtcgccgcgcagatcgtaagcatctcgatctccatcttcttgttcttagctgctgcaactgcaaatgccaatgccattgccgccattgatggactgatttggtgctgcaaatgccaatgccattgccgccattgatggactgatttggtgcagatcgcgacgctggtgacggtgtacgccaccttggggttcgcccacatcaagggcatcggctgggggtgggccggcgtcatctggctctacagcatcgtcaccttcctccccctcgacatcttcaagttcgccgtccgctacgccctcagcggccgcgcctgggacaccctcatcgagcacaaggtaaccttgccataacaacaaacaccttgcctgcatgtgtttttctcctcgcggaataactacaaacaccttgcgtgcgtgcgcgtgcagattgccttcacgagcaagaaggattacgggagaggggagagggaggcgcagtgggcgacggcgcagaggacgctgcacgggctgcagacgccggagatgggggaccacctcggcggcgtcggcggcggcgagcggagcagctacagggagctctcggagatcgccgagcaggccaagcgccgcgccgaggtggcccggctgcgcgagctcagcacgctcaagggccagatggagtccaccgtcaggctcaagggcctcgacatggacaacgtccagcaccactacaccgtctgaagtccaccgccggcgagctcgctcgccggagaaggaggaggctccgccgagctcgctcgccgcggctattttcaggggcagcgtgcatgcaattgagcctctcctcgtcgtcgtcgtcgtctgtaattcccttttttttatattaaattttaaactttggtttgaggtctagtggttaattgagttgacggtttgagggtttgagtttgtccttaatttggggttctgcttgaattatgacctggcattacctctcattagatttgtggttaatttcctctaattgcttggaaataattgagttgttaccgtgctttacagtacttggtatgaagttgttgaatctaatagtttccctttgtttgatttggggaaactattctaatc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0241800, RefSeq:Os08g0241800