Os09g0420100

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Revision as of 07:25, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0420100| Description = Zinc finger, RING-type domain containing protein| Version = NM_001069729.1 GI:115479200 GeneID:4347079| Length = 259...")
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Gene Name

Os09g0420100

Description

Zinc finger, RING-type domain containing protein

Version

NM_001069729.1 GI:115479200 GeneID:4347079

Length

2599 bp

Definition

Oryza sativa Japonica Group Os09g0420100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:15780042..15782640

Sequence Coding Region

15780085..15780355,15780440..15781047

Expression

GEO Profiles:Os09g0420100

Genome Context

<gbrowseImage1> name=NC_008402:15780042..15782640 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:15780042..15782640 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagacctccgccgccgcgggtggcgcacacttgatctacgtatcctccgacgacgaggaggacgaaacacgcgtcctccttgccgaatcctacagcgccgaggagatccagatccagcaggccatcctcctctcgctcgacccctccagcgacgcggacgccgcccattcctccgcctcctcctcccgcccctccggcgccgcctccacctccgacgaaccctcctcccttcccgaccgcaagggcaagcgcaagctatcatcggaagaagatggccctatcgaatccacgaggaagaagcggcggaagcgcggccgattcaagtgcagcgtctgcatggagaagctacaggtctcggagcagttcaccgtgagcttctgtgcccacgcgttctgcaacagctgcattggccgctacgtcgccgccaagatctccgagaacgtagccgtgatcgggtgccctgaccccgggtgcgaggagggtttcgtcgagatggacacttgcagggatatcatcccgccggagttgtttgatcggtggagcgtctcgctgtgcgagttggcactgggtgagaagaagtactactgtccgttcaaggattgctcggcgttgctgatcaatgacaacgacggcgcggagaagaagatcagggagacggagtgcccccactgccaccggatgttttgtgcaaggtgtcgtgtgccttggcatgatgggatcaaatgtaaggagttcaggaagctaggcgatgatgagaagggggaggaggatctgatgttcaagaagctggctgggaagaagaaatggcagaggtgcccaaattgtaagatgtttgtctcgaggattgatggttgtttacagataaaatgcaggtaa</cdnaseq>

Protein Sequence

<aaseq>METSAAAGGAHLIYVSSDDEEDETRVLLAESYSAEEIQIQQAIL LSLDPSSDADAAHSSASSSRPSGAASTSDEPSSLPDRKGKRKLSSEEDGPIESTRKKR RKRGRFKCSVCMEKLQVSEQFTVSFCAHAFCNSCIGRYVAAKISENVAVIGCPDPGCE EGFVEMDTCRDIIPPELFDRWSVSLCELALGEKKYYCPFKDCSALLINDNDGAEKKIR ETECPHCHRMFCARCRVPWHDGIKCKEFRKLGDDEKGEEDLMFKKLAGKKKWQRCPNC KMFVSRIDGCLQIKCR</aaseq>

Gene Sequence

<dnaseqindica>44..314#399..1006#ccagccaaccgccgccgccgccgagcaccactcgtcgccggccatggagacctccgccgccgcgggtggcgcacacttgatctacgtatcctccgacgacgaggaggacgaaacacgcgtcctccttgccgaatcctacagcgccgaggagatccagatccagcaggccatcctcctctcgctcgacccctccagcgacgcggacgccgcccattcctccgcctcctcctcccgcccctccggcgccgcctccacctccgacgaaccctcctcccttcccgaccgcaagggcaagcgcaagctatcatcggaaggtacccgccatttgcaattctccttgatgcgcgccgatttgtggttgctccttgcctaatttgttccgatctgtcgcaatgcagaagatggccctatcgaatccacgaggaagaagcggcggaagcgcggccgattcaagtgcagcgtctgcatggagaagctacaggtctcggagcagttcaccgtgagcttctgtgcccacgcgttctgcaacagctgcattggccgctacgtcgccgccaagatctccgagaacgtagccgtgatcgggtgccctgaccccgggtgcgaggagggtttcgtcgagatggacacttgcagggatatcatcccgccggagttgtttgatcggtggagcgtctcgctgtgcgagttggcactgggtgagaagaagtactactgtccgttcaaggattgctcggcgttgctgatcaatgacaacgacggcgcggagaagaagatcagggagacggagtgcccccactgccaccggatgttttgtgcaaggtgtcgtgtgccttggcatgatgggatcaaatgtaaggagttcaggaagctaggcgatgatgagaagggggaggaggatctgatgttcaagaagctggctgggaagaagaaatggcagaggtgcccaaattgtaagatgtttgtctcgaggattgatggttgtttacagataaaatgcaggtaatctgtttatgtaactccatattttggtttgtgtccctcctaaaattaagagaatggatgacaccaggacaaaaaggctgaatagagttacaaattggtgtcctctgttcatgtacactgaagagatgaggcaatcttttcgctattatagtggttagaaaaagaataatggctcaagcataatgattgcagaatatattagaatctttgctatactttacacatgtcaaatcaaattttgtgaataacttccatttctccatctttagatagttttgttggtgacgttgatgttagctaattggcagtacatgtttaaagagttcacgtaagtcatagtgcaccatcattacatatttggaagagtacatagtacctttggagtgttataatggaaatagcaagtctgtagctttgcttaggtttagtagtgttttggtgaatgctatctactgggtcaggattttactggtatggttagtagcagttttggttactgaccttatgctcaagatttttcttaataattgctgttctcataggtcaatgccgggatatactcccagccattgtaggttttaaccatgcagacacttcaaaactgctgtcaattcaacagcaaaatagggaaatgattgagcgcatgtttggtttgttggctgaatcaaccttacaaattttgacaatgccaaattttggtgttaccaaaatttggtaaggttaaaatggtagaattgtttggtttgtgaccttatcaaattttggcttagttttctgaatggaagattccagaatcaccaaattttggtagagttaggcaatgtaaggttgtgatggtaagagtttgttaggttcgttaccctaccaaaatttgttaccttacctaaatttgataaagtttatttcagtaacaaactaacggccctaaatttcccccttgtatgggcatgaaactgttgactacagccagcagtttttgtttttgttgtgcataaattttgtttttttcatagttccaactagaagcttgtggttttggtttggttatcagtagatttctgctgcacagtttgctgcaccattcttttcactatgaatctggaaatttggtctacctgccatttctggtttcttagatatgtcacaaaacttaagggaaaaatattttaccttatttgtctcgtaaacactgaattctaaagatgtactgtataatgttatttatgcattttcagtcttcgtcatttcactaacacgttttcatgtttgtcttgaaggtgtaaacagtatttctgttactactgtgctgccccaatgaagaaagatagtcactactgtatgagttgccatcgttagtgaagggtcttatctaaacactgtaagagttgccatcgttagtgaagggtcttatctaaacacagactttgtacataggtataggtaacatgtaataaatataagtatggtatcatctccttgaagtggaaatacattttgtacaatgttaatgatcttaatgacctgaagagcaggtcactgatccaagtctcagtgtcatctttttattaatcaattttgcgtgaactttggatgg</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0420100, RefSeq:Os09g0420100