Os08g0248700

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Revision as of 12:53, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0248700| Description = Similar to Blind| Version = NM_001067901.1 GI:115475538 GeneID:4345070| Length = 1590 bp| Definition = Oryza sativa...")
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Gene Name

Os08g0248700

Description

Similar to Blind

Version

NM_001067901.1 GI:115475538 GeneID:4345070

Length

1590 bp

Definition

Oryza sativa Japonica Group Os08g0248700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:9068086..9069675

Sequence Coding Region

9068206..9068341,9068551..9068680,9068771..9069455

Expression

GEO Profiles:Os08g0248700

Genome Context

<gbrowseImage1> name=NC_008401:9068086..9069675 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:9068086..9069675 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggagggcaccttgctgtgacaaggcaacagtgaagaaggggccatggtcacctgaggaggatgcaatgctcaagaactacattgaggagcatggcaccggtggcaactggattgcactgcctcacaagattgggctgaagaggtgtggcaagagctgcaggctaaggtggctgaattacctgaggccaaacataaagcatggggacttcaccccagaggaggacagcatcatctgcagcctctacattagcatagggagcaggtggtcaatcatagcagcacagctgccagggaggacggacaacgatgtcaagaactactggaacacaaagctgaagaagagactccttggccggcgcaaggaccgcggcggcggccaccaccaccgcagccagagcaccgccgacgatcttccggccggtggtgacggcggcatgaacgacggcggcggcggcggcggagagcggtcgctgagcgcgtcggcgatggagaggatccagctctgcatgcagctgcaggagctgcagaacccactgtccatccaccacaaccccttgctctctcatcagtggccaagcaaggccaccattgatgatcagaatcacaacaatgtcactgtggctgaacatggaatgtcaagctctgtgagcgaccaccaccgcctcgatgggcagcagctggagagcggcgccggcgccgccgccatgcagcaggcgtcgccgtcgagcggcggcgagaactccaacgtcgtcgtcgccatcgaggccgagctccaggagcttctctacgccggcggcggcgcgatcgtcgacggcggcgcgccgccgcagggggatgtggactggtggagctatgatcagggaaagcagtcacctgtgacttgctgggatttcacccctgaaaccagctccatcttccaggattatgcaacagtttatgacatctga</cdnaseq>

Protein Sequence

<aaseq>MGRAPCCDKATVKKGPWSPEEDAMLKNYIEEHGTGGNWIALPHK IGLKRCGKSCRLRWLNYLRPNIKHGDFTPEEDSIICSLYISIGSRWSIIAAQLPGRTD NDVKNYWNTKLKKRLLGRRKDRGGGHHHRSQSTADDLPAGGDGGMNDGGGGGGERSLS ASAMERIQLCMQLQELQNPLSIHHNPLLSHQWPSKATIDDQNHNNVTVAEHGMSSSVS DHHRLDGQQLESGAGAAAMQQASPSSGGENSNVVVAIEAELQELLYAGGGAIVDGGAP PQGDVDWWSYDQGKQSPVTCWDFTPETSSIFQDYATVYDI</aaseq>

Gene Sequence

<dnaseqindica>121..256#466..595#686..1370#acaactcatctcatcacattccatacacacatccatagcagcttcaagctaaggtgatactactacattcagagagaagaagcagaaagagataagaggttctgagagagactgagagagatggggagggcaccttgctgtgacaaggcaacagtgaagaaggggccatggtcacctgaggaggatgcaatgctcaagaactacattgaggagcatggcaccggtggcaactggattgcactgcctcacaagattggtagcaattattaccatttttacttatcactgatagtttcagaagagattataaattttcagacatgctaagattgtcatctgtgcaaattgtgctcatcatcaagcttttcatgtgactgtttttctttctagaaatgttttcaaatgtatcttctggttttgtgtgttcatgtgtagttaatttagtttatgtgtgtaatgttgcagggctgaagaggtgtggcaagagctgcaggctaaggtggctgaattacctgaggccaaacataaagcatggggacttcaccccagaggaggacagcatcatctgcagcctctacattagcatagggagcaggtacataattacaccactaaccactctcccttctcactaactatcaatcaatcatcataatcacactaaacttgacataattaaccacaggtggtcaatcatagcagcacagctgccagggaggacggacaacgatgtcaagaactactggaacacaaagctgaagaagagactccttggccggcgcaaggaccgcggcggcggccaccaccaccgcagccagagcaccgccgacgatcttccggccggtggtgacggcggcatgaacgacggcggcggcggcggcggagagcggtcgctgagcgcgtcggcgatggagaggatccagctctgcatgcagctgcaggagctgcagaacccactgtccatccaccacaaccccttgctctctcatcagtggccaagcaaggccaccattgatgatcagaatcacaacaatgtcactgtggctgaacatggaatgtcaagctctgtgagcgaccaccaccgcctcgatgggcagcagctggagagcggcgccggcgccgccgccatgcagcaggcgtcgccgtcgagcggcggcgagaactccaacgtcgtcgtcgccatcgaggccgagctccaggagcttctctacgccggcggcggcgcgatcgtcgacggcggcgcgccgccgcagggggatgtggactggtggagctatgatcagggaaagcagtcacctgtgacttgctgggatttcacccctgaaaccagctccatcttccaggattatgcaacagtttatgacatctgaaaattgtgaagaggtttgataaggatgttaattagggaggtaataataataataatataaatagggattgtctagcctttgtgttctttgatcagtgacacctaaaaccaaactgtaaggagtttgttgtaagaaatttgtagcaagggataaataaaaaggtatggtaaaaaatatatataccaggtccaagagatgatgtaatcttggcaccattctg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0248700, RefSeq:Os08g0248700