Os08g0248900

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Revision as of 12:53, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0248900| Description = Similar to ADP-ribosylation factor 3| Version = NM_001067903.1 GI:115475542 GeneID:4345072| Length = 4904 bp| Defin...")
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Gene Name

Os08g0248900

Description

Similar to ADP-ribosylation factor 3

Version

NM_001067903.1 GI:115475542 GeneID:4345072

Length

4904 bp

Definition

Oryza sativa Japonica Group Os08g0248900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:9080570..9085473

Sequence Coding Region

9080756..9080858,9080953..9080991,9081091..9081153,9082510..9082528,9083574..9083685
,9084249..9084296,9084719..9084849,9085123..9085156

Expression

GEO Profiles:Os08g0248900

Genome Context

<gbrowseImage1> name=NC_008401:9080570..9085473 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:9080570..9085473 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcatcgtcttcacgcggctcttctcgtcggtcttcggcaaccgcgaggcccgcatcctcgtcctcggcctcgacaatgccggcaagaccaccatcctatatcggctgcagatgggggaggtcgtctccacgatcccaacgattgggttcaacgtggagacggtgcagtacaacaacatcaagttccaagtctgggatctcggtggtcaaacaagcatcaggccatactggagatgctactttccaaatacccaggctatcatttatgttgtcgattcaagtgatacagataggcttgtaacggcaaaagaagagtttcatgctatccttgaggaggatgagctaaaaggtgcagttgtccttgtatatgcgaataaacaggatcttccaggtgcacttgatgatgctgccataacggaatcattagaactccacaagattaagagccgtcaatgggcgattttcaaaacatctgccataaaaggagagggcctttttgaaggtttggactggctcagtaatgcactgaaatccaaaagcagctaa</cdnaseq>

Protein Sequence

<aaseq>MGIVFTRLFSSVFGNREARILVLGLDNAGKTTILYRLQMGEVVS TIPTIGFNVETVQYNNIKFQVWDLGGQTSIRPYWRCYFPNTQAIIYVVDSSDTDRLVT AKEEFHAILEEDELKGAVVLVYANKQDLPGALDDAAITESLELHKIKSRQWAIFKTSA IKGEGLFEGLDWLSNALKSKSS</aaseq>

Gene Sequence

<dnaseqindica>187..289#384..422#522..584#1941..1959#3005..3116#3680..3727#4150..4280#4554..4587#atccaccttccccattcggtgagtcgtcttcgtcgtcttgggtactcgcgcgcgccagctcactcccagatctcccccctcctctcctccccgtctcagatctccaccgccgccgccgccgaaaccctagcccagccccccgccttccgccgcgcgcgcgggggtgacctccgcgccgccgccgccatgggcatcgtcttcacgcggctcttctcgtcggtcttcggcaaccgcgaggcccgcatcctcgtcctcggcctcgacaatgccggcaagaccaccatcctatgtaagcccacctcgccccccgactccatcgaatgtaatctcgccgtctccacctcggatctgatctgggtgcttgtgtttttttttcctcgcagatcggctgcagatgggggaggtcgtctccacgatcccaagtgggttccccgctcccgattccctcattttttttcttccattcggtttgctccgcgggtttggtgacgtgtgtgcttgttgttgttgcgttgctgcagcgattgggttcaacgtggagacggtgcagtacaacaacatcaagttccaagtctgggatctcggtgagtgtgcccccaagtctctgattcacgaggactggtttagatttttccgcgagacaatttataagtacaatttacgacaatatccatgaggccaattgtgggtactacaatttatgattgagtggaccaatggttgagacctagctgactagggtttgaccattacaattctgattctgtcctaggttttgagggaattttagtataacgtgaccttttttacttgtatgctgagttcctgaattgaatcaaaatggggttctgtttattctatgtggtgttgaagtaaatgagttgttgcctaatggctttcatggcttgtctgcaaagagttcaaaaatgaccattctgagcatcttaagcaattcagtgacctgttttttcctatgtttgaaggctgatgtggttattcttaaaatactatcctctcatctgctttggcactgatcgccaagccttagtataagaagtatttggttcactagcatttcacaatcctaaggggaagttcatatgcagtaatacactaacacttggattcttgcacagcaacaataatgatgtagaattcctgcggaagtagaaatgaagaaataaaaaaaatagtggaaaacaatgaggagaacgtgctcaaatcagactttagtcagcatgttcatttgcgaaataacaagagtcttgtatggtgggcaagtaaaaccatgagtatttttttatcactgctaaataaagtttgtattaaaaacaatagccattctactgtacccccaaaccgttagagcttagagcttatagcacattgataactatggaactcacatagctttgactagtatttcgatctccgaaactcatatagctttgactaatattccaatctcggaaaagtgtggcctggttttcgaaatatggattcatttgcttagcgtttgattgcaccatttcaaagctagttgtctcctgtggttagtaaagaaacatatttttttaattgccaccatcgtgtaacattacatgtacgatttactgtagcaataccttgtaatcaccggaacactggggagctacacattgcattccattttccatgtcatttaattgaaatctgcaagaatattatgcttggaaacgcatgcttaattgggcagttattcacatatcaagcatatttactcacatttaatgcattatacagctgtagtgatttaatgcttatatagtttaaaacaaacatctgaaattgcgatgagtttctgcttctctatgctagtgaaactttgtttgcctaatatttttatgttccttcactttaaaatatccaatttttttttaacaccactttcttctcaacaggtggtcaaacaagcatcaggtaccatctctatgtcatcacaatcaaagttttttctgtcaagtcattcatgcctttatatagtagccatttaatttttatcatcctcgaaaaggatcacccattctgccttcttacatttagactaccttttcttttcaatcatggaagtattgcgcgtgcaatacaatgacctggttgaaccttcttacttaagtttctacaagctaataatagtactcatgtatactacttgaaatgttctgataaaatcctaaagctagaaatttcttagggttcaaagggttaagttggaaatatatttcctctctagttttttgcactgctagctagctaggatttttactgcaataaggttttttatagacataggcttttactgcaaacccctaatttgatatggtttgatcttggggaatatcatagttgtaaaaaataatccaagcttttgtaagagtacttttattgggtgtaaatatggctagtttgtttttttccttgggcttcaaatatctaattattctccatggagtttttgcgtttgagaggcaggcaactggatatatataaaatttacttggtcatcctgttcttcagccggatatgtatagagaagggacatagatgcttaccacaagaaatgggggctacacatttaccccggggctaagacagctttctaaatactatcgcttatgatattccatatactacagcacttgacctttcccataacaaacatatatagatctgcacagtggagtacataggtgtccaaatgagcgtaatgcgaccattcattgaaatgaaattgtaattgtttaccttatacttacgtgtttagttcaggattcacaagaatatttaaactttatagtcaaccttcacttatgtcttgctacttctgattcctttctgttactcttttgtattcaagtatgtttcctttgttaggcatggattctcttagattatttgacttccttccttttaaagactaggcatgacacgtttctctacgccattaacatattcacctttttaggccatactggagatgctactttccaaatacccaggctatcatttatgttgtcgattcaagtgatacagataggcttgtaacggcaaaagaagagtttcatgctatccttgaggtatgggccacctgtgcttgagggactcggtatatatatttactgtgtcatatgtaaccattacatggaagaaacaaatgggattttgcacatatttctcaaagggtgattatgactgcaagtttagtgaagcatgctgcttgctcattctttaaaatcattaattggtaataaaaaatccatgtatttttgtcaggatttaacggattgcttacttgtcaggggatttcaggcgctttgtgattcacaggctatgcctccttttgcagtttaattttgatcccaacaactggtctgttataaatttgataaatcaatatctcatgctcgtttgttcatgaacactaacagtgtttatgcaccacaggaggccaggatccctatctagtttgctattttcattctttttatggttagaaatattagcagcatttcgttagcatggtgttacgcttgtgtagacataaatccaatatcctaatgattttaaggctatagcagtacacatgaattgatttcatttaggtgcatttgcttattggctgcttgccttcaactggcaggaggatgagctaaaaggtgcagttgtccttgtatatgcgaataaacaggtaaaaccaaaccattctgggtctcatacactgttgttaattttgtgtgcttaaattggtttcaaacgtactccggtgctacatttttctgcatgtggttcacttggattttgacagcccatggcatcttaagtccttaaacaaaagttacttctagctgttctgaacttgcactatttaagcattttttttggttaataaaatatatcgctctctgtaccaaacaaacgtagcctatttattatgattttccattatgttacttggacattaggtttcaaatgtgaatgtctttttgtcaattgtcattctttgttgcttgcattttctatacaaataagttggagatgctttattctatggcaacaatgtagacgcccaatatgatgtctcatgtgctgtcatgcctacaatgaatgcaggatcttccaggtgcacttgatgatgctgccataacggaatcattagaactccacaagattaagagccgtcaatgggcgattttcaaaacatctgccataaaaggagagggcctttttgaaggtttggactggtaagtcacatgaaattttcttttctctacggaacaaatgaaataatggctaaaatgtttatgctggtaaaatcctgtactatcctgtttcttgtagtgacgtgagtactggacggtttgttttcctgtgaatatgattagactgaactcccatgttacattttttccagttctgttttacaacacattattctgcaattcctccctgatgaatgcatatgggaatatctgatggaattaacttacaaaagcctggtttgattcttgctgcaggctcagtaatgcactgaaatccaaaagcagctaatttaggagcctctgttccatggatcattgcttgatggtaaagaacagggacactgctcccttttcctcacaagtctgcgtgagaacccccattctctttgttttaactccagaagttttataccatcgattatctgtaaagtgcttgttaaagttttcggatacgactttagatgtacctccatattgagatcaagaatagatttgtagaaaatgacgagcaaactgtcaggactcttggtcactggtggctttacccgtaaatcccttctattgtgacatttttttccgatgattgaacacgcctaatttccacct</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0248900, RefSeq:Os08g0248900