Os08g0250900

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Revision as of 12:53, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0250900| Description = Conserved hypothetical protein| Version = NM_001067911.1 GI:115475558 GeneID:4345082| Length = 3531 bp| Definition ...")
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Gene Name

Os08g0250900

Description

Conserved hypothetical protein

Version

NM_001067911.1 GI:115475558 GeneID:4345082

Length

3531 bp

Definition

Oryza sativa Japonica Group Os08g0250900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:9223379..9226909

Sequence Coding Region

9223618..9225207,9225306..9225579,9225853..9226907

Expression

GEO Profiles:Os08g0250900

Genome Context

<gbrowseImage1> name=NC_008401:9223379..9226909 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:9223379..9226909 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ggcgcggcggcgggggcgggggcgggggcgcacccgctgcactgccgcgcgctcgagctctgcttctccgtcgcgctggataggctcccggctgctgcggcggcggctgcggcggcgcatggggcgggggcgtcgccgcccgtgtcgaacgcgctcgtcgcggcgctcaagcgggcgcaggcgcagcagcggcgtgggtgccccgaggcggcgcagcagccgctcctcgccgtcaaggtggagctcgagcagctcgtgctgtccatcctcgacgacccctccgtcagccgcgtcatgcgggaggcgtccttctcctccgccgccgtcaagtccatcatcgagcagtcgctctccgccccctcgccgtgcccctccgccgcggcctccaccacgacggccgggcccggcccgctctccccgtcgccatccccactcccgcgcgccggcgcggccaacgcatacctcaaccctcgcctcgcagccgccgccgccgtcgccagcggcggcggcggcggcggtggcgacgatgcgcgcaaggtgatcgacgtcatgctcaagccgacgcgccgcaacccggtgctcgtcggcgacgccggcccggacgcggtgctcaaggaggcaatccggaggatcccgacggccggcttcccggccctcgccggcgcgaaggttcttcctctggaggcggagctcgccaagctcgccggcgacaaggcggcgatggcggcgaggatcggggacctgggcgcggtggtcgagaggctcctcggcgagcacggcggcgtggtccttgacctcggcgacctcaagtggctcgtcgacgggcccgcggcggcggcgtcggaagggggcaaggccgcggtggcggagatggggcgccttctccgtcgattcgggcgcgccggcgtgtgggccgtctgcacggcggcgtgcaccacctacctccgctgcaaggtctaccacccggggatggaggcggagtgggacctccacgccgtgcccatcgcccgcggcggcgcgccgatcgccgccgccgccgccggctcagctctccggcctggaggcagtggaattctcaacagctcgatggggatgctatcacctgcacttcggcctatgccagtgacaccaacggcgctccggtggccgcctccggggagcgaccagtctccggcagcaaagccggccatgtgcttgctttgcaagggtagctatgagcgcgagctcgctaagcttgaggccgagcagacggataagccggcgtcccgccctgaggctgccaagcctggattgccacactggctgcagctcagcaatgatcaaaataaggccaaggagcaagagctgaaacttaagaggagcaaagatgagcttgagaggaaatggcgcgagacgtgtgcccgaatccactccgcctgtcccatggcaccggcgctctccgtgcctcttgccacattcacgccacgcccacccgtcgagcccaaattgggggtcgcaaggggtgccgctgtccccactcttaagatgaatcccagttgggagaagccctcggttgcgccgacccttgagctccgtaagagccctcctgccagcccagtgaaaactgaccttgtgctctgtcgcttggacccgggcacgaatcctgctgtggagaatgagcagaaggaaagttgtgaaggactaacggctctacaaaaggccaagattgctggaatttctgatattgaatccttcaagaggctcctcaaggggcttacagagaaggtcagctggcagtcagatgccgcttcagccattgctgctgttgtaatacaatgcagatctggcagcgggaagcggcggaacgttgggacaaggggtgacatgtggctcctgtttgttggccctgatcaagctggtaagaggaagatggtgaacgcattgtctgagctgatggcaaacaccagaccagtcgtcgtgaactttggtggtgactcccggttgggcagggtcggcaatgatggtcctaacatgggtttctggggaaaaactgcactcgaccgggtcactgaggcagttcggcagaacccattctcggtgattgttctggagggcatcgatcaagtggacgttgttgtgcatggaaagatcaaacgggcaatggagaccggtcgcctaccagactcccgtgggcgtgaggtcagccttggtaatgtcatatttgtgctcaccacaaactgggtacccgaggagctcaagggatcaaacgttgagactctgctacgaggtgaagagaggatgttggagtcaacaagttcgagttggcaactagagctctcgattggtgacaaacaggtcaagcaccgagcagattggctatgcgatgatgttcgccctgcaaagttagcaaaagaactgtccagtagtcacggtctgtcacttgacctcaatttggcagtcggcgccttggatgacactgagggctcacataattccagtgatgtctcggtggaacaagagcaggagaaagggcagcttgcagtcaagcgatcaacaccggcccctggctctgatatattggaacttgtcgatgatgccattgtgttccgacctgttgacttcacgccattcaggaagacggttacagattgcatatcggcgaaatttgaatcggtcatggggagcagcagctcattcaggattgatgaagatgccgtcgattggatggttggcagtgtctggcttaccgacgagaagattgaggactgggccgagaaagtgctcaagccgagcattgagcgattgtggcacaatgtgaaacatgatagcgggcgctctatcattcgtcttacagcagttgcagccaaggcattgccaaggtggggagggggcagggaagggctaccggtggcggtaacgatcgccattgatggcatgtag</cdnaseq>

Protein Sequence

<aaseq>GAAAGAGAGAHPLHCRALELCFSVALDRLPAAAAAAAAAHGAGA SPPVSNALVAALKRAQAQQRRGCPEAAQQPLLAVKVELEQLVLSILDDPSVSRVMREA SFSSAAVKSIIEQSLSAPSPCPSAAASTTTAGPGPLSPSPSPLPRAGAANAYLNPRLA AAAAVASGGGGGGGDDARKVIDVMLKPTRRNPVLVGDAGPDAVLKEAIRRIPTAGFPA LAGAKVLPLEAELAKLAGDKAAMAARIGDLGAVVERLLGEHGGVVLDLGDLKWLVDGP AAAASEGGKAAVAEMGRLLRRFGRAGVWAVCTAACTTYLRCKVYHPGMEAEWDLHAVP IARGGAPIAAAAAGSALRPGGSGILNSSMGMLSPALRPMPVTPTALRWPPPGSDQSPA AKPAMCLLCKGSYERELAKLEAEQTDKPASRPEAAKPGLPHWLQLSNDQNKAKEQELK LKRSKDELERKWRETCARIHSACPMAPALSVPLATFTPRPPVEPKLGVARGAAVPTLK MNPSWEKPSVAPTLELRKSPPASPVKTDLVLCRLDPGTNPAVENEQKESCEGLTALQK AKIAGISDIESFKRLLKGLTEKVSWQSDAASAIAAVVIQCRSGSGKRRNVGTRGDMWL LFVGPDQAGKRKMVNALSELMANTRPVVVNFGGDSRLGRVGNDGPNMGFWGKTALDRV TEAVRQNPFSVIVLEGIDQVDVVVHGKIKRAMETGRLPDSRGREVSLGNVIFVLTTNW VPEELKGSNVETLLRGEERMLESTSSSWQLELSIGDKQVKHRADWLCDDVRPAKLAKE LSSSHGLSLDLNLAVGALDDTEGSHNSSDVSVEQEQEKGQLAVKRSTPAPGSDILELV DDAIVFRPVDFTPFRKTVTDCISAKFESVMGSSSSFRIDEDAVDWMVGSVWLTDEKIE DWAEKVLKPSIERLWHNVKHDSGRSIIRLTAVAAKALPRWGGGREGLPVAVTIAIDGM </aaseq>

Gene Sequence

<dnaseqindica>1703..3292#1331..1604#3..1057#gtggcgcggcggcgggggcgggggcgggggcgcacccgctgcactgccgcgcgctcgagctctgcttctccgtcgcgctggataggctcccggctgctgcggcggcggctgcggcggcgcatggggcgggggcgtcgccgcccgtgtcgaacgcgctcgtcgcggcgctcaagcgggcgcaggcgcagcagcggcgtgggtgccccgaggcggcgcagcagccgctcctcgccgtcaaggtggagctcgagcagctcgtgctgtccatcctcgacgacccctccgtcagccgcgtcatgcgggaggcgtccttctcctccgccgccgtcaagtccatcatcgagcagtcgctctccgccccctcgccgtgcccctccgccgcggcctccaccacgacggccgggcccggcccgctctccccgtcgccatccccactcccgcgcgccggcgcggccaacgcatacctcaaccctcgcctcgcagccgccgccgccgtcgccagcggcggcggcggcggcggtggcgacgatgcgcgcaaggtgatcgacgtcatgctcaagccgacgcgccgcaacccggtgctcgtcggcgacgccggcccggacgcggtgctcaaggaggcaatccggaggatcccgacggccggcttcccggccctcgccggcgcgaaggttcttcctctggaggcggagctcgccaagctcgccggcgacaaggcggcgatggcggcgaggatcggggacctgggcgcggtggtcgagaggctcctcggcgagcacggcggcgtggtccttgacctcggcgacctcaagtggctcgtcgacgggcccgcggcggcggcgtcggaagggggcaaggccgcggtggcggagatggggcgccttctccgtcgattcgggcgcgccggcgtgtgggccgtctgcacggcggcgtgcaccacctacctccgctgcaaggtctaccacccggggatggaggcggagtgggacctccacgccgtgcccatcgcccgcggcggcgcgccgatcgccgccgccgccgccggctcagctctccggtgcgtccatctctttcccctgcctgattcaatcttgatttcttacaaaaaaaattgtttggtgtgaatttgtttcacctgggagaagatttcatttggtggggaaatttttgctttgattaaggttttttttaattcactatgatggttgaaatcctgaaaaaggtagtagttgctttttgtgtaacaacagtacgcttctacttttgtgttcaatctcataactgtagctcaattcctgtcaatttgatgaattattattggattgtgtaggcctggaggcagtggaattctcaacagctcgatggggatgctatcacctgcacttcggcctatgccagtgacaccaacggcgctccggtggccgcctccggggagcgaccagtctccggcagcaaagccggccatgtgcttgctttgcaagggtagctatgagcgcgagctcgctaagcttgaggccgagcagacggataagccggcgtcccgccctgaggctgccaagcctggattgccacactggctgcagctcagcaatgatcaaaataaggtatgtgtttttcccctgtcgaaatcttgggtaaacatcaagctctcttctaccggaatcgccattaatatatggtgttttttgtttctttattacaggccaaggagcaagagctgaaacttaagaggagcaaagatgagcttgagaggaaatggcgcgagacgtgtgcccgaatccactccgcctgtcccatggcaccggcgctctccgtgcctcttgccacattcacgccacgcccacccgtcgagcccaaattgggggtcgcaaggggtgccgctgtccccactcttaagatgaatcccagttgggagaagccctcggttgcgccgacccttgagctccgtaagagccctcctgccagcccagtgaaaactgaccttgtgctctgtcgcttggacccgggcacgaatcctgctgtggagaatgagcagaaggaaagttgtgaaggactaacggctctacaaaaggccaagattgctggaatttctgatattgaatccttcaagaggctcctcaaggggcttacagagaaggtcagctggcagtcagatgccgcttcagccattgctgctgttgtaatacaatgcagatctggcagcgggaagcggcggaacgttgggacaaggggtgacatgtggctcctgtttgttggccctgatcaagctggtaagaggaagatggtgaacgcattgtctgagctgatggcaaacaccagaccagtcgtcgtgaactttggtggtgactcccggttgggcagggtcggcaatgatggtcctaacatgggtttctggggaaaaactgcactcgaccgggtcactgaggcagttcggcagaacccattctcggtgattgttctggagggcatcgatcaagtggacgttgttgtgcatggaaagatcaaacgggcaatggagaccggtcgcctaccagactcccgtgggcgtgaggtcagccttggtaatgtcatatttgtgctcaccacaaactgggtacccgaggagctcaagggatcaaacgttgagactctgctacgaggtgaagagaggatgttggagtcaacaagttcgagttggcaactagagctctcgattggtgacaaacaggtcaagcaccgagcagattggctatgcgatgatgttcgccctgcaaagttagcaaaagaactgtccagtagtcacggtctgtcacttgacctcaatttggcagtcggcgccttggatgacactgagggctcacataattccagtgatgtctcggtggaacaagagcaggagaaagggcagcttgcagtcaagcgatcaacaccggcccctggctctgatatattggaacttgtcgatgatgccattgtgttccgacctgttgacttcacgccattcaggaagacggttacagattgcatatcggcgaaatttgaatcggtcatggggagcagcagctcattcaggattgatgaagatgccgtcgattggatggttggcagtgtctggcttaccgacgagaagattgaggactgggccgagaaagtgctcaagccgagcattgagcgattgtggcacaatgtgaaacatgatagcgggcgctctatcattcgtcttacagcagttgcagccaaggcattgccaaggtggggagggggcagggaagggctaccggtggcggtaacgatcgccattgatggcatgtagagagggaactggggggagataaattctttgtatggtagatatgtaaatattggggagaacaactccctgttataagctaggggaggttactatctgaagcacataggagggagggagaaatgtccattgaccaccaaataggcatggaggttatagatcttataacacccaaatatgatctatagttttgatatattttatagctgtgttgattgaaacaaaaaaaaggttttcttttg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0250900, RefSeq:Os08g0250900