Os08g0254900

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Revision as of 12:53, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0254900| Description = Hypothetical protein| Version = NM_001067917.1 GI:115475570 GeneID:4345098| Length = 3714 bp| Definition = Oryza sa...")
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Gene Name

Os08g0254900

Description

Hypothetical protein

Version

NM_001067917.1 GI:115475570 GeneID:4345098

Length

3714 bp

Definition

Oryza sativa Japonica Group Os08g0254900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:9423764..9427477

Sequence Coding Region

9423773..9424165,9424721..9424801,9424962..9425066,9426231..9426380,9426832..9427056

Expression

GEO Profiles:Os08g0254900

Genome Context

<gbrowseImage1> name=NC_008401:9423764..9427477 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:9423764..9427477 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgccgcctccctcctccctcctcccctccccgctcccatctccgcccatcctcctctccaccaacccctcctccctgcgcctcccgccgctcgccgccgggaggcgcggggccgagcgggccgtggctgcggcggcggcgtccgcgcccgcgcccgcgacgcccgtgcaggcgcagcagcgggcgtcccggccgtcggcggccgaggtggcgcggacggtggtggagcttgcgccgtcggggacgctctccgtggtcggccccgacggctggccgctcggcgtcggcgcccgcttcgtcgccgacggctccggcgcgcccgctctgtgcctcgccgcctccgggcccgccgccgccgcgcccgatgcgccgtccagcttccacgtcgagtttcgtcagagtggggccaggacacctcaatgtactttgcttggtgctttgactaaacctaacgatgaatatgaattaaagaagctttctactaggtggcaaaagaaatttggcgaggagatagatcaagatcttttgtatttgatatcagtagacagaatcttgcacattgaagatttcaatgaggatggcatgtgggtaattccatcagaatacagtgatgcagaacctgaccctcttcgaaattttgcggaaagcattgttgaggaaatgaacagcaaacatgctgaagatgtacataggatatacagtatttatgttgaatcagatttccaggcgacagaggtgaagatgatttgggtagacaggttgggttttgacttgcatgttcattccggggaaagtacctttgctgcccggatccctttcacgagagaggtctctgatgagaagggagtgaaatcatcattcaacatgatgtctcatcatgcgtgggaagtagagaagagttatgcggccccagagtttgagaaggtagagctcttgaagaaagtcagatag</cdnaseq>

Protein Sequence

<aaseq>MSPPPSSLLPSPLPSPPILLSTNPSSLRLPPLAAGRRGAERAVA AAAASAPAPATPVQAQQRASRPSAAEVARTVVELAPSGTLSVVGPDGWPLGVGARFVA DGSGAPALCLAASGPAAAAPDAPSSFHVEFRQSGARTPQCTLLGALTKPNDEYELKKL STRWQKKFGEEIDQDLLYLISVDRILHIEDFNEDGMWVIPSEYSDAEPDPLRNFAESI VEEMNSKHAEDVHRIYSIYVESDFQATEVKMIWVDRLGFDLHVHSGESTFAARIPFTR EVSDEKGVKSSFNMMSHHAWEVEKSYAAPEFEKVELLKKVR</aaseq>

Gene Sequence

<dnaseqindica>10..402#958..1038#1199..1303#2468..2617#3069..3293#atcaccaccatgtcgccgcctccctcctccctcctcccctccccgctcccatctccgcccatcctcctctccaccaacccctcctccctgcgcctcccgccgctcgccgccgggaggcgcggggccgagcgggccgtggctgcggcggcggcgtccgcgcccgcgcccgcgacgcccgtgcaggcgcagcagcgggcgtcccggccgtcggcggccgaggtggcgcggacggtggtggagcttgcgccgtcggggacgctctccgtggtcggccccgacggctggccgctcggcgtcggcgcccgcttcgtcgccgacggctccggcgcgcccgctctgtgcctcgccgcctccgggcccgccgccgccgcgcccgatgcgccgtccagcttccacgtcgaggtgagggggatgcagccgtgctcatggattgattgattgatttcttaggctgtttactgttgcgtgggggatagaattttacggattgctcgcgttttgacttcactgttttgttttgcgtgagattaagacggaaattcgaggcgctgtaatgattttgtgcactgttcgtgtagaatttgagttagaaggccgctggactcttacatcacgcaggagaatttcattgctgaagctttgcattgtgcgttgcctttgcagttgtttagtttgtggtttgcattcttgtgtacttgtgttgtttggaaattggaaagttctagagtctagacatcttaagatgtcagatctctccactatgttaaatgcattttggttttgtggaagacaggtgcttgtaacaaaggtgaacactttaattacctagttgatgcgccgacactgtgaactctgtgtagaatcattgatgactaaattctaatgctgacaatgtgagcactagcacaactgttttgtatcttgtactcaccattctcgctaccttttgtggtgtagtttcgtcagagtggggccaggacacctcaatgtactttgcttggtgctttgactaaacctaacgatgaatatgaattaaaggtaaacttttttttatggtttttcattttgttcaaggcatatttgcattacacttgtgaattgtaagttgattacaatgggaaactatgtactgcagaagaatagcatgatatactaagtcggattactgattcgtaatgtgctaaattgaattatgcagaagctttctactaggtggcaaaagaaatttggcgaggagatagatcaagatcttttgtatttgatatcagtagacagaatcttgcacattgaagatttcaatgaggtaaaatacattattttcttctagttacttttggtttcttcatattctgcagtttgtcattttgggagttcttattctagtactgcagtgtttgttccgcattgattgcctcactttatctacttctatacaaacattccttactttatctaccgtattgggtgaaaaatgaacttattttgggacggaggaagtagaaggtgtctcattttcatgagaaaatgagatggaacttttagtgttcttcacacttcattctgttttgctaataataaggatataatagttaggtatgggttatttgtgcatgattttttgcatagtgtgagacagtaacaagatatgtagacaagagatgtgggttgaatttctttttactcgctgaagattgctgtgcagaacggtatcaaatagttatccatgacgctgaatggtgatcagtaaactagctgacgaaaatagcctcttaacgtgaaaatgtacattaaaagcatggagcaagataacttttacattctatcctaagaatattttcagttggaacatccatttcattaccttggctgtattggtctagttatcatttctgtgtttcaggtgtagtgcaccccttgaaagtgtctggccttctttttttgttataactggttttgccttctttcatattcggaagaagacctatttattgtttacattattcagattttgtttggctgacctgtattttacgaggataaatatatggagatcacttttagtagaatgtctttctcaatttcctttcatggatagcttcctgactttagaaaaaaaaacatcaagatattttagcacttaataaaatcatcaatttatcaattttcccccacacctatatttagtttattccccactcattgaatcacttccacacgaccaaattactacggaaatgaattgatataggttgctaattgaaccttgagcagctgctgaaatttgttcaaccaacatattaggtgctttaaatgttgtcaagtttcatctgttgcatttgatgtacttagttctatgtgagttgtgcagtttttattttctgatggatgtgtgctggtgagccaattacaccttagaactttgtagttcaaatgagactgatattcatgggatactttttctgttcaggatggcatgtgggtaattccatcagaatacagtgatgcagaacctgaccctcttcgaaattttgcggaaagcattgttgaggaaatgaacagcaaacatgctgaagatgtacataggatatacagtatttatgttgaatcagatttccaggtactgaagttattcctgtcattcctacaactttgcttcttacttcttgaaaggaaaaatagctaatgttaagataaagcacatgtttgtcttttcatagtttctttataatcacacagctgtagagattttttttttttgatgggaacatagctatagagaattaccaaaacagaaagatgtaatttactgatagtctgatagtggtatagtgattatgtgttatatatatgagttaggggcatatcaaactatgcatctttttattctttatttgaagaaaagtaattaaaaaattgttgatcttatcttttctaaaagatactccagctgattaatattttatgtgctatgtgataattcatagatagtgagatattatataccgcaccaagtgttgagttccgttatgtttactgaatgtgctaacagtgttcttttatggtgacaggcgacagaggtgaagatgatttgggtagacaggttgggttttgacttgcatgttcattccggggaaagtacctttgctgcccggatccctttcacgagagaggtctctgatgagaagggagtgaaatcatcattcaacatgatgtctcatcatgcgtgggaagtagagaagagttatgcggccccagagtttgagaaggtagagctcttgaagaaagtcagataggtactgtgatttctatggtgccgccttaccctgcatccgttgtcagtattttgtcattcatacgagtatagcgcaacttttgtcgcattaaatgtattgtgtgtacctccattttttgccatatgtgctataggttagtcgttcttttgtggagagctatgaatctagactgtaaggttggaactttagctgtggcttcttcatgagatgagattgagataattaaatcatgtttatacgatcttcagttgtaacatgcaacgttctacgtagtcagaattgcagtggagtactggctttatgccccaagtatagagcacttttgatgtaactaggaagatagcccgcgcacatgcgcgggcatcttatctgatgttgttttaaattgtgttaagaatgttttatgtgggtgacttttctt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0254900, RefSeq:Os08g0254900