Os08g0274700

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Revision as of 12:54, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0274700| Description = GINS complex, Psf3 component family protein| Version = NM_001067964.1 GI:115475665 GeneID:4345149| Length = 10677 bp...")
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Gene Name

Os08g0274700

Description

GINS complex, Psf3 component family protein

Version

NM_001067964.1 GI:115475665 GeneID:4345149

Length

10677 bp

Definition

Oryza sativa Japonica Group Os08g0274700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:10566335..10577011

Sequence Coding Region

10570952..10571023,10571102..10571173,10571533..10571636,10571829..10571921,10576391..10576530
,10576644..10576774

Expression

GEO Profiles:Os08g0274700

Genome Context

<gbrowseImage1> name=NC_008401:10566335..10577011 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:10566335..10577011 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gcaatagtattctgtttgcttggtgcaatgcctggttattacgacatcgatgatatcctgatggaggaggagcctatttcggtagtttttcaagtgagtgcaaatggtgttggactactagatcctggcgctgaaagaaacagtgttgaaaagggtgctaaggtggaccttccattttggcttgcacatgggctgctgtctctggaacaagcagtttcaataaatgtacctccttgcttcacccagaaaacccggaaggagatccaagctgatgcagcctgtgttgatttgaggattcgttgcccttacttctatgagctaggatgcaagatagtccctttggtgaacgacaggagcattggactgttcttgcgctatgcattcactagtaggtacaaggagatactaagcaagtcacacagctcttccatgatgacagtgcccaagtttgttccgcgccttacaaaagaagaagctcaagtgttcgaatctgctagggactcgatgaccgctttcaagaagtggcgcgctggcggtgtgaggctgcagaaagcgtccattcttggtaggaaaaggaagacaaaactgcctgatggaccttctgcaccttga</cdnaseq>

Protein Sequence

<aaseq>AIVFCLLGAMPGYYDIDDILMEEEPISVVFQVSANGVGLLDPGA ERNSVEKGAKVDLPFWLAHGLLSLEQAVSINVPPCFTQKTRKEIQADAACVDLRIRCP YFYELGCKIVPLVNDRSIGLFLRYAFTSRYKEILSKSHSSSMMTVPKFVPRLTKEEAQ VFESARDSMTAFKKWRAGGVRLQKASILGRKRKTKLPDGPSAP</aaseq>

Gene Sequence

<dnaseqindica>4618..4689#4768..4839#5199..5302#5495..5587#10057..10196#10310..10440#cttcccatcccagccgccacgcccacgcgtcgcaagccgccgccagtcgacgcacgcgccgactgcgccgtcgccgcgccagcccggccgcctgcccgcgcacctcaccgtcgccagtcgcgctgcccagcccgctagccgcctgcgcgcgccggcgcgcgcctcgccgtcgccggacgcccagacgcccggtcggcggtcgcggccgcggcgttgcctcgccggccgcccacaggccacagccggctcgccggctgctcggctcgccgctcgccgcctccgcacctcgccgcctccgcggctccgcacctcgcgcctggccggcgcggtagcgccccgcgcccggcggccgcctgcgcgcctcgcggccttcggcctcccatcctcgagcaacatcacagcaaccgagcattcgagcaactgcaacggtgagtcgccgagtcggtgaactgaagtgtattgattattttagcttcatagtttatgaatgactatctagattactagattaggatttaggaaccaccgaacctgtgctgcttttctagtttgctcaattgctctttgatattgttgtttgtaggtttgaaacatgaagagaaaaaaagggtcccatggttaatttaaagagttttttagaaaaagttgctaaaaaaaagaaatcaagaaccaactggttctttgctcgcggtttgtcaataagacgggacaaccagttgaacggtttcttggtcttggttttgtatgctcaataaattaacgcattcaatttatggtcaattctattcatttataactttatgaaaacatgtttatacctttacatattatacaactattagaccttgggtttgaaaattttctctctctcttacaatttcgaatacccaagttgaaaaacctgggcccgatctcgtcgcaactccggttcgtgtagttcggcgcatcgccatcgtcggcgggggcggcaggcacccactgccgtggaagatgtcgcagtctccacttacgagctgcccacgagccaaacaaggtagagccctacaaggagtacaattggaagcctgcgggtgcgcagtccatcaaaagattcaaaaccatggccatagcagccgcaacatccctcggcccatgtcatagcctcaaagagacaaatacgtgcgcatcaggaataagttcactttgtgaccctcaggagtgatcgaaatctaatccgtgaccctaaaccacaaaaccggatatctcgacccccaaactcttaaaaccaatacaaatttactccctcggcggttttgtagagcggtttcactgacgtggtgcctacgttgcgatattgaccgagtcttcgttccacgtggcattgacgtggcacttacgtggcattagaattaaaaaatatgcgtgggacctgtttgtcattcacacaaaaagaaatgtgggcccactaacatgtggggcccatatgtcagtcctcccttcttcctcctccctctctcccttctctctcgttctctcccttcttccccttcggcaggcggcggggcatgggccgcggtgtggtggcggcggcggtgggctggagctgatacgggttctggagcagggagctcatcctcccggtcgacggcgacggcgatgatgtagacaagggagcggatgaggctgggtagtcggtgccgcgatggggctgaggctgaggctgcggggggagctcgtccggcgggtctatggccgtggatctcggctcgatgaagaggcggtcgccacccccctctggcggtggtgccacggtccccggagtggagtcgacgatgctgaggccagcgctcggcgagatgggatctgcgtgttggacatcaggttggccaacgccggcaggtacgccggcaacatcctcacctgcagagacaaacaaggccatggcctctccctggttccaatcgaccatggatactgtcttcctgagagtgtaagcactgacgctgacagattttcttctagctaattgacttccattttgttcgttggtgatcatgcatcgatcacgcatgtgcagtttgaggattgcatattcgagtggttctactagccgcagtgtcgggagccattcagcgaggagacggtggagtacataaggtcactggacgccgaggaggacatcgccattctgaggttccatggctgggagatgccagccaagtgcgagcgcgtcctgcgcgtcaccaccatgctgctcaagaaaggcgtggacacgggcctcgccgcgttcgacgtggggagcatcgtgtgcagggatggggccaggcagtcccgggagtggaggagtcgacgatggcgaggccagcactcggcgagatggggtcagcgtcgtggaggaagtcgaccggcgggggttgtccttggcatcgtcgatggcccacgacggaggcggaggttgaaggcagcggcccacgcactagcctcgctcgccggccaacacggaggagccagtgtcgtccttgttcgccgccgccgctgccgctccggccctcgccaaatggaagaggggaggaagaagaaagagagatgagttagtgcgccccacaaatttttgtgtgtgaatgacaaacgggtcccacacatattttttaattctcatgccacgtaagtgccacgtcaacgccacatggaacaaagactcggtcaatatcgccatgtaggagccacatcagtgaaaccgtcctccaaaaccgctgagggagtcaaattgcactggttttagaagtttgggggtcgagatatccggttttgtggtttaggatcacaaattagatttcaatcacttttgagggtcacaaagtgaacttatttctgcgcatcaaccagcgcgagtgcgtgactgcgagagcccaagcagatcgcgaacgctctcatcaactagggccacatcgtgcagccaatgcccaccaagccctacgcctgccttaacatcttcacgacctagtgaagctgatttgcttcattcacttcgccttatttgcttcacttgattatctgtttgcttctgatttgctggtgcacatcgcttgattcacttctccccttcggcctcaccctcatgcaaggttgtcatatcatgatccatattctagtttcttacgatattatgatcctgtcaaattgtaacgataccgatcccgtctagtaccctatctttcatagtgtctcgatcctattgtttactttcacatgatcgtatgaaatcttaggtgctatcctgattctatggtgtctacgatcctataaattattatttaaaataaggtggattgataataatatgaataaatatgctcaagtttacaataaaaaccaattaaatttatcaaaatcattattatatgctttaatttatataatgtattattatattttatataaaaatacgtaatttctaaaatattatagtatctcgatcatcctatggtagtatcttataatactataatactacaaatcgaaaaattatcctacggctccattcgcttcttctgtaaatgaagattaaaagcgggtacgtaaaacaaggaaaccattaacatgtaattaattaagttttagttattacaaacttgagaaatggatttatctaatattttaaagcaacttctatatatataaagttttcgtataaaatatattgtttagcagtttgaaaaacgtgccaacgaaaaacgaggaaagatatgaatctttcattttaatgaaagttagaacggggcctatatctaaatactgattatcttgcccttacgtagctaaacgagcctagctcgttatgttggcacgagccaaccggagctggctcggctctactctactcgtttttgtttgagcgggaaagccgaaagaaacccgcgaagccaaaattccccaccgccgccgcggcggaaacaactccgatcttggacaccgacaccgcaccccgacggaaatccacgcggagaacggaaatcgcctccccccctcccctcctctttgatcctctctaagcacgactgcattgcacgaggttggttgttgcgagttctggcggcggggcgctgcccgcgtagtcggggcggctcgtgcagtcgcagttgagcggggcgagggcactggccgctggggcgagcaggaggcggctggcaacgggcggcgacgcgctgcgcctgtgcggatctggcgcgtggaagcaggcggtcggtggtgaggcaggaggttggggggagggcgtggcaggaggcgcgcttctccgcagagctggtctgctctctgctgcatgcattcttttgttgtattgttgaatttcaatgagattttattggatttatgagaaattgagccctatgtttcagagttttgatagatttgcaattggggaagaaaacaaaattggttatttgttttacaagcaattctagtaatactcacccaattgatgagggaacaaatcaaccaaatgtcattagctactttgagcccattccccttttttttggtcctggattcgtgcatttactgctgcttttcatcaatgtgcaacctatttatacagtgtagctgcttatgccaaagggtgacagaaatcaagaataagcaatagtattctgtttgcttggtgcaatgcctggttattacgacatcgatgatatcctgatggaggaggaggtaattttatgattgttttatcgtcttctggtgtgcttgcacaaatatgatctaaatgtgtttctactcttactgcagcctatttcggtagtttttcaagtgagtgcaaatggtgttggactactagatcctggcgctgaaagaaacagtgtaagtgacttttgcacctatggtttagtgctatggtgtaacttcctagggcacctactgacctttcttcctccatccctattgttctagaaggaagttggtttggaatctatgcagtagttaattgagtttatctgagatgagtgttatatgaccattggattttatttattaaaactgctttggaatgctaggtgtactcttgttggcttgtatgacacattttctagtaaacacaatctggtggtggatgcttttttagtttgtcttgtaaacaccttcacatcatttcttgctttggttggaaacaaaagtgagagatttgctccagttaaacattgtatcttctttatctccaggttgaaaagggtgctaaggtggaccttccattttggcttgcacatgggctgctgtctctggaacaagcagtttcaataaatgtacctccttgcttcacccagaagtaggtttcatcataacttgtttttcattgttgtatacagagaatcttagctagaattcatgtttcaacagatttacatgaaagtacttcttgtcaacttactgtagaggtcttcttcagtaattgcaaatgcctggtagtttcaatatttcctagaaaagttgtcctaagatcataacaacattgctacagaacccggaaggagatccaagctgatgcagcctgtgttgatttgaggattcgttgcccttacttctatgagctaggatgcaagatagtccctttgtaagttctgaaacgatttcaatctcatgcacttttaggatatagttctggcttactacctgcatccgctttttacttgatgccctagaatctgtgctgtcaacaattctaaagtttgaccaccggtaaaagaaagcagagatattatttacctttgtgttaaaaatcttactgaattattagttcatattaaaatgtttctatgtgatatttgatagaatagccacttcattgctttacaaaattttgtccacaaatgaccttattaacatacgctataatacttttcttttacaatgactaagtaattctttcggcgtacaacatacatttttctttgtgcatgtttgtttcaatattataaatgcttttgagtccattgaagatagattctttcatactttcataagacaagttcattttaaacccttgaactttgcaaaatttctacttaactccaacaaaaaaaatagatatgtttatctgattatctccagacttcaaacaatagagcaagggtggttttggaggttgttttgccattatggacaccaacttccatgccataacatcttggaaataccacattggtaattatcacttcaaataagatcgaaaatacaccaacactcactttatttcagtaatgtctctccttttaatcaacctatctatctttttgctcccctctcttttatccaaacaaattgcttggtttcacagaaaacaatcataagcaatagtgagttgctcctctccatattatggctgcagccttgctgatgtcaggcagcggttgtgaaagtgctgcttgatgaacatgacgttgctcaaaacatagctactgtgtgttaataataaaatatatctctgattccaagttggatttgatattggtagatcatccgaaattaaagaaaccaccttcaattgaaactctagtgagaagtataaacaaaaaatgtggaggcagtggtaagagaagaggttggtcggccatgccttgccacttcttggtatctagtcttgctgttcttgttttgcacaattgttattttccatctagtgatttcaggttgtttaacctaatcttcagcttcagtatgttaacaaaccattatgtacagatgatcatgaatcatataaattgctgtgtttgctacagataatattgtatcatacatgttcgatataaatgaatgtgtctgttttattaacacacccttcgtattttgttaaagcaaacacttgatacatttccacagttctatttgtaaaattagcatatatatatatatatatatatatataagctctattatacacccctcccttagaataactattctacaccccctcccacctcccatccgtccccacctcctcccctcccatcgctcctctctccctcccgcgcccccttccttcccgcactcctctcccccagtgccccctctccctcccgcgccccctctccctcccgtcgtgcccctctccctcccatcgcttctccctccgattccccctccttttttttttctctccctcctctcttttttagaaaaattaaaaataaattggtgaattcaagacttgaacccatgatctcatggttcatgacaagcagttctaaccaaatcatcgtatgatgatttgtgaacaaatcagttatgtacctataacaatcataccttgttactatgattcggcagtaacattatcccagaagctgcaaaaatgtataggttgttactgcacttttggcagtaacaatatgacgaaatttgcagtaacagagaacatgcatagtaacagtggccctatagtagtaatttttttagatctagagtattttaaatctcaatatttagagagtactaacgtacacgtcatgtcttatttttctaacccatttgcatcatggcgttcgtaaaaaaaaagtgcttaaccaaactagaaccatcataactattttttaacgttgttactgcgaaaagcagtggtgttactacatattggccatcgtgttactacgctgttccagtgagacaaggactaaaaaagaggtaaatctcaatctttagagagcaatatctctcacatcatatcttgtatttccaatccgtttgcaccatgaagttcataaaaaaacgcttaacgaaacaagatccatcatggctactttttgacgttgttactgcgataatgtgatcttgttactgcacgatgaccgtcctgttactgcacgattcctgcaagacgagagcagcaaagtggtgggcgggtttgaccggcgggaggacgctttgaccgaggtgggaggggggttttgggccatagggagggtgggggaggtgggtttggcccatgggagggggggtgtagaatagattcactatatgtatatataataaataaataaataatcttttgtgctaaatttgtatttagaaggtcgaacaagaaaagctaacaatatgtggaagtactgtcgaagggcaatttgtaaagctgatgtagaggtggagtggtagattcgccaccactaccaccattgcctttttaaaaaagcattatggatattggtaagatttagtttgaatattttgcagattttagttatctccgtaaaccaactgtgataggtttgagtttaggatttgtatgtgatacatgaaaataatcagtagatttgtcctgagaagtactttcagaatattagtcttgttaggtttaacaaatatatattacaataaaaattagctttcaaagctgtattttgaaggctctacaaatgctgaaaatgacttgtgacttgcctgtttgcttggcaagtttagggttttcagtggcaaaaaggttcccccagaaaagtttaccttttgctttatattttgtatcaaactatgtaatgtttggctttctattaaaagccggatcactcagtgatctgctttctaaaaaaaaattgtgttgctgacttgaatagtagtagagtagctgtgatagatgagggcttcgactaggcctattagaggaacagggagtgcagagagacatgtagataattgatctattcttgcctttggaatgcaggagattatggcctgaggatcccttgcaaagtacctaatggagcactgcatgcaactcaaagatattagatagatatttgaatacaactcaataatcaactactagatgatctaatgctgctcttaatgctgttgttgctgcttcactgctcatcgttggccatggcctgcaaccacggcattgtgatgttagcataccctaacttggtgcttcacaatcaacttccctttgtgattgacaattttattaaggcatgcttttgtttcttttattttttttctcaatttcattctatgaatattaaaagaagctcttaatttttcggaatgtgattgatcattcttttgctgacaatatgttcagatactcgaacaaagtcccttgctgtttcctctatttgtcagccaaacattcattataaatttcagcagtcctgacaaatgatctctgtgccaccaagacaccagttcaacttacacagaacagagtacatgagaactgtagttgtgctaaggatatcctctaaactttatgagcataagaacatattatattatagatataataattaaaagaaggtaatggtggtgatggcactgtggcggttgcgaatttgccaccccacctatagaatgtctttttatgaccccttcaacatgtctttttatgaatttgccaccccacttattgtagatcttgagcatgtttatttctccttatttgccttacaaagaaaaataaaattcagtatgggaagttccaaaatggccgaactgtcacatatagatggacttgtttggtgcaaaaatcatttgtatatttgggcaatattagactttttttttttaaaaaaaaaagggtagcaagtgtatttggttgttctgcagaacatttgaaggattgccttgtcagatgctccagtgtgttttgccttcagttttactggccaatagaacagtcatggaactactcatttggtctctcgctttagtgttgggtgtgagcaactggattaacatttggagctaccagtctaccacttatacatgatttgttcatgctcaccgttagtcatcctctcgggattcagcttttcctaatggttacggtattttcataataaaggtgcaatgaggacagagaacgaagtccacaatgaatttggagatgcacttctagagagggagtccactgctgttgtcactattttcttgcagtctgtcaagaagagttaagaatctgatgatgaagttatttatctagtgatctgtgggattattagatgtttggatgctgatatcttactaaattggtgtactttgcacatgcagaggtgtataatgatttattcgtttgcatggttgtgtaaacagggtgaacgacaggagcattggactgttcttgcgctatgcattcactagtaggtacaaggagatactaagcaagtcacacagctcttccatgatgacagtgcccaagtttgttccgcgccttacaaaagaagaagctcaaggtaaatacttctcccaactctgattttactcatcatcctgcatttcttccattaccattccaagctcccaactattatcacttcaagtaaccctttttttttctgtcgcgaagtgttcgaatctgctagggactcgatgaccgctttcaagaagtggcgcgctggcggtgtgaggctgcagaaagcgtccattcttggtaggaaaaggaagacaaaactgcctgatggaccttctgcaccttgaaccatgttttaggttcttctgtatggaaaatcgtacttgagctgatgtatgtatacttcattaatatgtcgctgtaagagaagaccaaaagtgaaacaattccgttcggagatcacacgtttgtgcattctaatctggtggctggccaaccaacacagcctcttgaacaaagggcagttagttattatattccttccttttggaatcaccgaaacgcgtaatacatattttaactgc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0274700, RefSeq:Os08g0274700