Os08g0276100

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Revision as of 12:54, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0276100| Description = Conserved hypothetical protein| Version = NM_001067967.1 GI:115475671 GeneID:4345153| Length = 3375 bp| Definition ...")
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Gene Name

Os08g0276100

Description

Conserved hypothetical protein

Version

NM_001067967.1 GI:115475671 GeneID:4345153

Length

3375 bp

Definition

Oryza sativa Japonica Group Os08g0276100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:10629316..10632690

Sequence Coding Region

10629347..10629922,10630679..10630869,10631391..10631648,10631769..10631886,10632011..10632096
,10632200..10632380

Expression

GEO Profiles:Os08g0276100

Genome Context

<gbrowseImage1> name=NC_008401:10629316..10632690 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:10629316..10632690 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagacgccaaccatgtcgacgtccatggccacgccggcgaagctcccctcaccgccgtcgctgccgatagcgaggcaatgctgctgccacctgctgcagctagggcggcgcggcggcgcgggcgtggcgcgggcgtcggcgaagaagaagaacccgtggctggacccgttcgacgacgggcccgacgacgagttcgactaccgcggcgcgttctcgggggggaagcaggaggaggacccgcggccgccggaggacccggcgaacccgtacgggttcctgcggttcccggcggggtacaacccggagctggatagcctggcatccaaggtgcggcgcgacgtgcggcgggcgtgctgcgtggtgtccggcggggtgtacgagaacgtgctcttcttcccggtggtgcagctgctgcgggacaggtaccccggggtggtggtggacgtggtggcgtcggcgagggggaagcaggtgtacgagatgtgcaagaacgtcaggtacgccgacgtctacgaccccgacgacgactggcccgagcccgccgagtacacccaccagctcggcgtgctcaagaacaggtactatgatctgatcatatcgaccaagttggccgggatagggcacgcgctcttcctcttcatgtcgtcggcccgcgacaaggtcggctatgtttaccccaacgtcaacagcgccggcgccgggctgttcctcaccgagatgttccggccgccgaccaccaacctcgccgacagcggctacaacatgtatcaggacatgttggagtggattgggcggccagcgaagggtgtgccggagcacccggtaccgccgttgcgggtgtccatctccaagaagctccgagcgttcgtggaggacaaatatagccgtgccggcgtcgagaagggcaagttcgtcgtcgtccacggcatcgcctccgactccttcgccaacatgaggtcgaggggggacgatgactgcctcctccctctcgagcattgggctgagatcgccaaggagatcagctctgaagacaatggtctgaagcctctgtttgtgatccctcatcagaagcacagggaagaggttgaggagactgtggggaaggacaccaatatcctgttcatcaccactcctggccaactcacctgcctcatcaacgactccgtcggcgtcgtcgcgaccaacaccgccgccgtccagctcgccaacgccagggacaagccatgcgtggctctcttctcatccaaggagaaggcgaggctgttcctgccgtacttggaggagaagaagggctgcaccgtcgtcgcgtcggagaccgggaagctgatcgacatcgacgtcgaggccgtcaagaaggcggtgaaggagttcaaggccgccccaagcgttgcattggctcaaacatga</cdnaseq>

Protein Sequence

<aaseq>MQTPTMSTSMATPAKLPSPPSLPIARQCCCHLLQLGRRGGAGVA RASAKKKNPWLDPFDDGPDDEFDYRGAFSGGKQEEDPRPPEDPANPYGFLRFPAGYNP ELDSLASKVRRDVRRACCVVSGGVYENVLFFPVVQLLRDRYPGVVVDVVASARGKQVY EMCKNVRYADVYDPDDDWPEPAEYTHQLGVLKNRYYDLIISTKLAGIGHALFLFMSSA RDKVGYVYPNVNSAGAGLFLTEMFRPPTTNLADSGYNMYQDMLEWIGRPAKGVPEHPV PPLRVSISKKLRAFVEDKYSRAGVEKGKFVVVHGIASDSFANMRSRGDDDCLLPLEHW AEIAKEISSEDNGLKPLFVIPHQKHREEVEETVGKDTNILFITTPGQLTCLINDSVGV VATNTAAVQLANARDKPCVALFSSKEKARLFLPYLEEKKGCTVVASETGKLIDIDVEA VKKAVKEFKAAPSVALAQT</aaseq>

Gene Sequence

<dnaseqindica>32..607#1364..1554#2076..2333#2454..2571#2696..2781#2885..3065#aactcatcagcacactcactctgcaacaagcatgcagacgccaaccatgtcgacgtccatggccacgccggcgaagctcccctcaccgccgtcgctgccgatagcgaggcaatgctgctgccacctgctgcagctagggcggcgcggcggcgcgggcgtggcgcgggcgtcggcgaagaagaagaacccgtggctggacccgttcgacgacgggcccgacgacgagttcgactaccgcggcgcgttctcgggggggaagcaggaggaggacccgcggccgccggaggacccggcgaacccgtacgggttcctgcggttcccggcggggtacaacccggagctggatagcctggcatccaaggtgcggcgcgacgtgcggcgggcgtgctgcgtggtgtccggcggggtgtacgagaacgtgctcttcttcccggtggtgcagctgctgcgggacaggtaccccggggtggtggtggacgtggtggcgtcggcgagggggaagcaggtgtacgagatgtgcaagaacgtcaggtacgccgacgtctacgaccccgacgacgactggcccgagcccgccgagtacacccaccagctcggcgtgctcaaggtaaaccaaaaattatgtcactgctacgtacagaaatagtcactcaaagtggggatgtatatgttttaaactcgatcgagaagggattatgtccactcgtttattcaaacttcatctaaataattgttaagaattctttcaaaattgacaacatacacaccgtacgtgtaaagtactcaaaaaaaaatcaagtcaaaattcaactcacacattgagaaataattaaaaaaaaatccaacatatgagtagtgtcatgtctgaattcgtcttttgtttcctcaaagcatagatcgaatttaaatatgtttttatggagtaatagatgttattatgcattgtcatttttttttagaatttttcacaaccaattacattgaatttagaaaataaaaattacacgagaagatatcctctcgagagattagaattctctctccttcagaagtgtcatgcccagcccaggtttacattctctaatggtcagcagatttcgactttcgagccatagtgagtaatcggtttttcattaatttcgacaaatttcaaacaaaccattggagttgcacatctcgagccggttcgatatatgcgctgaatttgttcaaaatttattgtgattctctaaacataataatatcagataaacctgcttaattatgttgcttccccaccacatatgctcagtattttgattagattatatttatcatgaaagattcaaccaactgaagcttgattttgtgttgaggttggcagaacaggtactatgatctgatcatatcgaccaagttggccgggatagggcacgcgctcttcctcttcatgtcgtcggcccgcgacaaggtcggctatgtttaccccaacgtcaacagcgccggcgccgggctgttcctcaccgagatgttccggccgccgaccaccaacctcgccgacagcggctacaacatgtaagatcatcatcctcctcttctccgcggtttcgcctccccttggttcataactgttataatttcctcatccgaaaaagttactgctttggcattcttgtgctgtatagttgcatttaatttatataggggcaactgtctcatcttttgcctttgatttaggttgaaaagccataacaaaatgaactaggcaaccgaatatgatttgttggcaaaacttttaactgttcttaatggttcaaaagtcaatattgagaaataaactatgataaggaaaactcaaaatcaaatctaaaattaaattttaaaatttaatatttggttgcggctaataagacaaacaagcagaggcagagttataacccttatagtaaagcagatattgcctagctcttcttttgcaacttaggaatcttgctcaattattcttgtagaagagttgaaccaattaccgtcaaaatcctataaaattcttgcaaaatgctttctgatttcgaagagtgtgcaactggatggattaggtatcaggacatgttggagtggattgggcggccagcgaagggtgtgccggagcacccggtaccgccgttgcgggtgtccatctccaagaagctccgagcgttcgtggaggacaaatatagccgtgccggcgtcgagaagggcaagttcgtcgtcgtccacggcatcgcctccgactccttcgccaacatgaggtcgaggggggacgatgactgcctcctccctctcgagcattgggctgagatcgccaaggagatcaggtttttcacctcacctcactcactcactcaagcacggctgctcttacacttacatttccagcttggtaccgattgtgagaaggtagaactaaagccaaaaaaatggtggtgtcttggcagctctgaagacaatggtctgaagcctctgtttgtgatccctcatcagaagcacagggaagaggttgaggagactgtggggaaggacaccaatatcctgttcatcaccactcctggccaagtaggttctttgatgcttcttcattacaatcactttgcaatctgaaaacaccttagatcatctttcacaggtaacattacaattctttattactgagtgttttctttttgtgatccatgataagctcacctgcctcatcaacgactccgtcggcgtcgtcgcgaccaacaccgccgccgtccagctcgccaacgccagggacaagccatggttagatcaactgagctgcgatctgcatctccagattttggaatggttattatttcagaggatgaactgctcatggcattgatgttttcctgaatctttgcagcgtggctctcttctcatccaaggagaaggcgaggctgttcctgccgtacttggaggagaagaagggctgcaccgtcgtcgcgtcggagaccgggaagctgatcgacatcgacgtcgaggccgtcaagaaggcggtgaaggagttcaaggccgccccaagcgttgcattggctcaaacatgatgaagaccatcatcttcttgttgcactgtacatagatctgcacggttacagtgagctcgcctgagcaagtgagcagcaaaagctccttgcctggctctgattcaatgtgtcttgtagtcgttcagttcagctacaaatgttccacatacaaccgcatgaaatgcccaaactcaccttgtctactgctcaccgagcagacaagcgatgcagcctgtgttactctgtttatagaatggaaatggcatacaccttgcacgtttttatgatataacaccagatacaataaacatatcatggcatggatcggctt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0276100, RefSeq:Os08g0276100