Os09g0421200

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Revision as of 07:25, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0421200| Description = contains InterPro domain(s): IPR010978| Version = NM_001069737.1 GI:115479216 GeneID:4347088| Length = 3062 bp| Def...")
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Gene Name

Os09g0421200

Description

contains InterPro domain(s): IPR010978

Version

NM_001069737.1 GI:115479216 GeneID:4347088

Length

3062 bp

Definition

Oryza sativa Japonica Group Os09g0421200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:15866117..15869178

Sequence Coding Region

15866227..15866334,15866982..15867119,15867203..15867292,15867403..15867609,15868349..15868516
,15868662..15868865,15868946..15869032,15869110..15869118

Expression

GEO Profiles:Os09g0421200

Genome Context

<gbrowseImage1> name=NC_008402:15866117..15869178 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:15866117..15869178 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagaagaaaatattagatgaacaatccctagatcagaaagatgaacttcaacggttgaaatctagcttagaaagttgtgagaaagctatggaggattgtaatattcaaaatgagctggagaaagatagcattctatcggagctcctaactctccaaaaggaagtcgtatacttgtcatcatcttctttgatgaaagagaaggagtctatccgaaaggaacttgacagaacaaaaacaaagttaaaagagaccgagaacaaacttaaaaattccattcaagagaagataaaacttgagagtgaaaaggctgaggcccagagagaaataaagaagctacagagccaaaggactcttcttgaacgtgatttacggaaacgtgattcgtttactgttgacaaaagacatgaacagagtgtgaagtcgaaggagcttgccggtatctatgatcaagctgtccagattcaggaggactacggaaagcttgagatgcatgcttttgatatggaggctgaaattgcttcgttacaagaagctttagttactaccattgcagaaaaggaagaagcattatctagagtggagcttctcacatcagcagtggaagatcttgaaagtaggttgaattcagcagaatcagagactagttccttgcttgaggagactgctgtcttgactaggaagttagatgcatctgaatctatctctaaaaaacttgaggcttctattagttctttatcaagggaaaaagaagacatgggaattgaacttactgatgttcttctggaaatggagtctgaaagatcaacgtggactgccaaggagaaagcttatcttgaagccaaacaaaaactgaatatctgcaataagaacaattgcaaattatcagaagatttgattaaggtgagacaagaattggcgtgttgcagagaacagtacagtattcttgaggctaaaatgattttctccaagaatgacacaaatgaggagaaatactggttagtcttgtag</cdnaseq>

Protein Sequence

<aaseq>MEKKILDEQSLDQKDELQRLKSSLESCEKAMEDCNIQNELEKDS ILSELLTLQKEVVYLSSSSLMKEKESIRKELDRTKTKLKETENKLKNSIQEKIKLESE KAEAQREIKKLQSQRTLLERDLRKRDSFTVDKRHEQSVKSKELAGIYDQAVQIQEDYG KLEMHAFDMEAEIASLQEALVTTIAEKEEALSRVELLTSAVEDLESRLNSAESETSSL LEETAVLTRKLDASESISKKLEASISSLSREKEDMGIELTDVLLEMESERSTWTAKEK AYLEAKQKLNICNKNNCKLSEDLIKVRQELACCREQYSILEAKMIFSKNDTNEEKYWL VL</aaseq>

Gene Sequence

<dnaseqindica>2845..2952#2060..2197#1887..1976#1570..1776#663..830#314..517#147..233#61..69#gtcattagggattacgagaacatttcaaactgtttgcgagaaaaactcagcaaacttgaaatggagaaggtatgcattttaagttctttttacccattgtttgattttcattctaagcagctctcattggcttccattgatttcagaaaatattagatgaacaatccctagatcagaaagatgaacttcaacggttgaaatctagcttagaaagttgtgagaaagctatggaggtctgtgactgcttaagccctatttggtgattaaattctttatgtattgtttatgttctaaaatcattgcttgtactcaggattgtaatattcaaaatgagctggagaaagatagcattctatcggagctcctaactctccaaaaggaagtcgtatacttgtcatcatcttctttgatgaaagagaaggagtctatccgaaaggaacttgacagaacaaaaacaaagttaaaagagaccgagaacaaacttaaaaattccattcaagagaagataaaacttgaggtttgtttgttgaaattagtattattaatatgcgtggtacttcaagtttgttaattattttatatgtgtaaacaagaaaaccctacattattcgctaataaccagttctttttactgatgaactatcaatatgtatttcccctagagtgaaaaggctgaggcccagagagaaataaagaagctacagagccaaaggactcttcttgaacgtgatttacggaaacgtgattcgtttactgttgacaaaagacatgaacagagtgtgaagtcgaaggagcttgccggtatctatgatcaagctgtccagattcaggttacaatcatcccttgtattacttttcagtcaatttgttgtgtaggaaactgatctaattgactaattcagggtactggcataatattgttacaacttgcaataataactctaataaatcacaacagtcactcgacaataatattggccaatatgctcccaatcacagaccataccattatgcgattccactgttccagaatatgtgttttagactgtggtggtttgaagctaccaagtgctaatgtggattcaatatttctagtacagggctagtggttcataaaatatgccatctctctggtttctggtttatgatggtttatcacttcgttggtctcacaacttggcaacctgcaatcatggaaaaaaatctatttattgttccgcatagcttttattgcatgttttataacccaaatctcttttgttgacatccagaatgttcaccatttcagtattgatgtggacttatagtcaacaaagtacaaacactcaagagcatccattttttttgtctatttcagtattacatatagtaaatttgaaacagaaggtcatttcctgatatcagttagggaacagtgacaaagatgccatgttgagtgaggaagaagaaatttcagtcatactgtctattcacatatcatcccagcataacactagagagttttacatctgtaggatgacctaactagctatgctatgcatgtagtgatggctcttttatccttttcaggaggactacggaaagcttgagatgcatgcttttgatatggaggctgaaattgcttcgttacaagaagctttagttactaccattgcagaaaaggaagaagcattatctagagtggagcttctcacatcagcagtggaagatcttgaaagtaggttgaattcagcagaatcagagactagttccttgcttgaggagactgctgtcttggtatacttgatttgtcttatgcatattttggaagatttgtttcccatctatttgtctaatcctaaatgttttgacaccatgaaattttgttgtgtttctctttgatgcagactaggaagttagatgcatctgaatctatctctaaaaaacttgaggcttctattagttctttatcaagggaaaaagaagacatgggaattgtatagctctgtgcttatgtcaaattgattgatgttagctgaaagttgaaacttattgcacttctgtctgctgtaaaatacaggaacttactgatgttcttctggaaatggagtctgaaagatcaacgtggactgccaaggagaaagcttatcttgaagccaaacaaaaactgaatatctgcaataagaacaattgcaaattatcagaagatttgattaaggtaacaacaatagagttcccattgatcattgcacatctcccgtgtgcccagtccattttatgtatgcagtcactagtcatgctatgtggttttatcaacaactcaatattgtttagttctggatcatgctatatcaatttgtgtcaatactgtttagatttggatcatgctatgaatatcaatgtgtcatatgtactgctgcacttacctgttgtggttgtttgctatgatattttttatttaaatatttattgcacatttcttttcttgcctagcaacattagtggggaagaaagcatgtttggtttccttgtttggttcttttctggacaagggtttccttcttttaagggagacaaaatttagctcgcctctttagcatgaatttgctttcctaccagcaacttagaaaggttagttgcgtcttgttaaagaactagacatgccctagttgccttgtattgagttgatttacataatgtagttcttctaatgttgtcttgccctagacgactagtttcattttcctaatgtttttctttttttgttcaaagtaatagtcaagcaacctccacattcaatgttttttcaccaatattttgaagaactttggtatctctgttactgatattgcaatatactgctaggtgagacaagaattggcgtgttgcagagaacagtacagtattcttgaggctaaaatgattttctccaagaatgacacaaatgaggagaaatactggttagtcttgtagtaattccatcaatctgacatattgtgcttcagtgttgtatgatcgggacaacaagtaatacaacaaccatgtaggagcatgccttaagctacttttaatatttcttttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0421200, RefSeq:Os09g0421200