Os08g0285200

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Revision as of 12:54, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0285200| Description = The start codon is not identified.| Version = NM_001067984.1 GI:115475705 GeneID:4345171| Length = 3559 bp| Definit...")
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Gene Name

Os08g0285200

Description

The start codon is not identified.

Version

NM_001067984.1 GI:115475705 GeneID:4345171

Length

3559 bp

Definition

Oryza sativa Japonica Group Os08g0285200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:11351374..11354932

Sequence Coding Region

11351374..11352105,11353129..11353532,11354072..11354170,11354258..11354489

Expression

GEO Profiles:Os08g0285200

Genome Context

<gbrowseImage1> name=NC_008401:11351374..11354932 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:11351374..11354932 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>aatgcttccgctccaggagctccagtagcagcagaagttgcctgcaacagccgggcccaccaccgcctccttcccccaaccagcgtgagcccaccaccgcccattgccgccgcgacaatggcgtcgccgccggagccggagccggacgccggcggcctcaccgactacgagcgccgccgtgcggagaacatccggcgcaacggcgtcatcctcgactccctccgccgcaaggccgccgagctctccgccatcatccagctctcgcgcccccccaccaagaagcagcagccccgcgcgcgcccccgcgccgcgcccgccgtcgtgcgccgctccctccgcacgcagggccttcctccacctcccgcctccgggccagcgccagcgccacctcgccgcagcacccggatcaccccgtccctcgcctccgccatcctcgacgccacctctccccccgcgtccgaggccaaggtccgcgacgacggcttcgacgccaggacggagctggtgctgaggccctccaacgtgaggaggctcgtgtcggcggacaggataccgtcgttgcggatcctgccgctggtggaccggaccgtggtggcggcggggagcaatgtcgggcatgttgggttctgggtcgtcgatgacgatggtgacgacgcacacagggtgttcgagtatatgcctcacctgagctctgtgggagcaatcgttgcacacgcagccaagccgcacaagatttacagctgtagtcacggaggtgaaatatgtcttatggaccttgagagagagaactttaatattacccggctgtccgaatttcctattttgtcactttgtcaagcgccaaatagccccagctgtctatattttggtgaagaaacagatgtgaaactttttgatgataggattggtaaggtgtcaacctcatggaatgcacatgctagcagaatcaactcaatagattttcatccagagaacacatatatgttggccacaagttcaagagatggaactgcttgtatgtgggatttgagaaccatgaaaaagaagggagcggagagcttggtggttcttgaacatgacagaggtcttcagtcagcttatttttcaccaagcggacatatggttgcaactacaagcttagatggtattgtccgagtttttagtgtggataacttcgaaaactttcatacagtggagcgaaataacaatatcggcacacatctttctacattcaaggcaatctggggctggaatgacatggacttgtttattggaaatgcgacacgtgcaatagatgttatctcagttgacctgaatgacagtagcatctcaactacgaacaacgcatgtctcaagagcgaacacatggtttccatcccataccgattttctgcgcacccatgtaaagttggtcaccttgcttgttcaagctccagcggcaaggtgtttctttggaccagagcatga</cdnaseq>

Protein Sequence

<aaseq>NASAPGAPVAAEVACNSRAHHRLLPPTSVSPPPPIAAATMASPP EPEPDAGGLTDYERRRAENIRRNGVILDSLRRKAAELSAIIQLSRPPTKKQQPRARPR AAPAVVRRSLRTQGLPPPPASGPAPAPPRRSTRITPSLASAILDATSPPASEAKVRDD GFDARTELVLRPSNVRRLVSADRIPSLRILPLVDRTVVAAGSNVGHVGFWVVDDDGDD AHRVFEYMPHLSSVGAIVAHAAKPHKIYSCSHGGEICLMDLERENFNITRLSEFPILS LCQAPNSPSCLYFGEETDVKLFDDRIGKVSTSWNAHASRINSIDFHPENTYMLATSSR DGTACMWDLRTMKKKGAESLVVLEHDRGLQSAYFSPSGHMVATTSLDGIVRVFSVDNF ENFHTVERNNNIGTHLSTFKAIWGWNDMDLFIGNATRAIDVISVDLNDSSISTTNNAC LKSEHMVSIPYRFSAHPCKVGHLACSSSSGKVFLWTRA</aaseq>

Gene Sequence

<dnaseqindica>1..732#1756..2159#2699..2797#2885..3116#aatgcttccgctccaggagctccagtagcagcagaagttgcctgcaacagccgggcccaccaccgcctccttcccccaaccagcgtgagcccaccaccgcccattgccgccgcgacaatggcgtcgccgccggagccggagccggacgccggcggcctcaccgactacgagcgccgccgtgcggagaacatccggcgcaacggcgtcatcctcgactccctccgccgcaaggccgccgagctctccgccatcatccagctctcgcgcccccccaccaagaagcagcagccccgcgcgcgcccccgcgccgcgcccgccgtcgtgcgccgctccctccgcacgcagggccttcctccacctcccgcctccgggccagcgccagcgccacctcgccgcagcacccggatcaccccgtccctcgcctccgccatcctcgacgccacctctccccccgcgtccgaggccaaggtccgcgacgacggcttcgacgccaggacggagctggtgctgaggccctccaacgtgaggaggctcgtgtcggcggacaggataccgtcgttgcggatcctgccgctggtggaccggaccgtggtggcggcggggagcaatgtcgggcatgttgggttctgggtcgtcgatgacgatggtgacgacgcacacagggtgttcgagtatatgcctcacctgagctctgtgggagcaatcgttgcacacgcagccaagccgcacaaggtgatgtttttcctgttcctctgctcgtgcactgcctatgttctcagagtaattgagcatttcatatataatttggtgtagctgaaatagtattcgattgggtgactgaacgaataagtatttgctagagagtaaactgtgccgatgcttcatatacaacctgcaaatacttagttattatttatggggatagttgatgtttgccgcttcaaaaaaaagttaaatttggcacccttttctcattactactccctccgtcctataatacaaagtattttgactttttgtttgcactgtttgaccattcgtcttatttaaaaaattttagaactattatttattttatttgtgacttaatttattatccaaagtattttaagcataactttttattttttataattgcacaaattttttgaataagacgagtggtcaaacaatacaagcaaaaagttaaaatcccttatattatgggacggagcgagtagaattttagttttacttgatggtatttgtagaaacaaagatcaattgatcaatggaaattatcaaaatttctagtcctgatgatcacacattaaattaacttggattcccttcggtagtttggttggctgaattagatgttgggatttagggtctggtgagatgggccatggcctttgcccaaattggaaatatctcatgggccctcaatttccaccagttgttgggccaaatactgggcttccaatcatgggcccttacgattgaactaaacagcgagtcttcttcatatcttggtcgtacctagctaactaatcatttgccaagagagcaacactgttgggagtcatcccaccgctgtggtctttgtaatgttgataaccttgtctttatggtcaaaatatctttagatagctctgtgcttggaggctttgcagcacaaaatagttttctttgtggtaaattttatcttgttgaatatatccactttcaaatctcgactgttatttaaattgatttccatgatatattttgcagatttacagctgtagtcacggaggtgaaatatgtcttatggaccttgagagagagaactttaatattacccggctgtccgaatttcctattttgtcactttgtcaagcgccaaatagccccagctgtctatattttggtgaagaaacagatgtgaaactttttgatgataggattggtaaggtgtcaacctcatggaatgcacatgctagcagaatcaactcaatagattttcatccagagaacacatatatgttggccacaagttcaagagatggaactgcttgtatgtgggatttgagaaccatgaaaaagaagggagcggagagcttggtggttcttgaacatgacagaggtcttcagtcagcttatttttcaccaagcggacatatggttgcaactacaaggtgatcatttacctaggctattcctacacttcttcagcagctccctgtaatttacatcttctctgtttttgatagaacggatctctcttgacattttgaataatgagacatgtctctaatatcattatatcacagccagatccaatattagattactatcatgtgacgtaatcttgcaatgctatatattgctttcatagtttgtatcagttgtagttctgctttgtaaatatacaaggagctgtatgtagagagtgggttacggtattattgtgaatgccacctgttatctatttatatttacaaataatatagataaactcaattgttaagtgaaacaaatttattcaattagaattagtagcagcattattacctcatcagtgcatatatattatataccaagtccttgaagttgggtaaggaatcaaaatggtgcaagaatggcaaatggatgacaatttttttaggatgagatggatgaggctttgactgagattatatgtgcccaggactgaccttattcttattgtatgcagcttagatggtattgtccgagtttttagtgtggataacttcgaaaactttcatacagtggagcgaaataacaatatcggcacacatctttctacattcaagtataataatggctctttcctcattgttatccttaatccatatctaattaatctttctgacttcacgcattaaactaaatgttgcagggcaatctggggctggaatgacatggacttgtttattggaaatgcgacacgtgcaatagatgttatctcagttgacctgaatgacagtagcatctcaactacgaacaacgcatgtctcaagagcgaacacatggtttccatcccataccgattttctgcgcacccatgtaaagttggtcaccttgcttgttcaagctccagcggcaaggtgtttctttggaccagagcatgaaccaacaaggcttcaaatgactgattcttttgactcaacttttggtaaggtgttaattttgatggttgcaacacctaagtcttgtttcatactccccaaggcatgaacagatgactgatatatttagatggaagaggatcctctaaacttcccatggtaaagctaagttagagaagcatagtgctgtgatttttgggcacatatcagtcatctcatctgatatgagatggatggttctagattctccttacagtgctatgctacagtgaaaacactaacttttgtgtgctacagtgagtcggcatagaacccaacactgtgcgctaccatgctcctctgacagttacttcacaacatcagaggaaccggatccatttagatggtgtacatacaactcgtataatgggttatatctctagttattgcaatatatttgcactgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0285200, RefSeq:Os08g0285200